RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 TRAV39A0A0B4J263 110 aa4.49□□□□□ -1.69
NEDD8-203ENST00000524927 SOX14O95416 240 aa4.49□□□□□ -1.69
NEDD8-203ENST00000524927 PRH1P02810 166 aa4.49□□□□□ -1.69
NEDD8-203ENST00000524927 CT45A10P0DMU9 189 aa4.49□□□□□ -1.69
NEDD8-203ENST00000524927 ZNF3P17036 446 aa4.49□□□□□ -1.69
NEDD8-203ENST00000524927 DAD1P61803 113 aa4.49□□□□□ -1.69
NEDD8-203ENST00000524927 ASAH1Q13510 395 aa4.49□□□□□ -1.69
NEDD8-203ENST00000524927 TIMM50Q3ZCQ8 353 aa4.49□□□□□ -1.69
NEDD8-203ENST00000524927 PAN3Q58A45 887 aaKnown RBP4.49□□□□□ -1.69
NEDD8-203ENST00000524927 SLC35F6Q8N357 371 aa4.49□□□□□ -1.69
NEDD8-203ENST00000524927 BORCS8Q96FH0 119 aa4.49□□□□□ -1.69
NEDD8-203ENST00000524927 TSNAXQ99598 290 aaKnown RBP4.49□□□□□ -1.69
NEDD8-203ENST00000524927 DAZ1Q9NQZ3 744 aaKnown RBP4.49□□□□□ -1.69
NEDD8-203ENST00000524927 PSMC3IPQ9P2W1 217 aaPredicted RBP4.49□□□□□ -1.69
NEDD8-203ENST00000524927 GNG12Q9UBI6 72 aa4.49□□□□□ -1.69
NEDD8-203ENST00000524927 ENOPH1Q9UHY7 261 aa4.49□□□□□ -1.69
NEDD8-203ENST00000524927 RFNGQ9Y644 331 aa4.49□□□□□ -1.69
NEDD8-203ENST00000524927 CDH10Q9Y6N8 788 aa4.49□□□□□ -1.69
NEDD8-203ENST00000524927 V9GYS6 101 aa4.49□□□□□ -1.69
NEDD8-203ENST00000524927 ZNF682O95780 498 aa4.48□□□□□ -1.69
NEDD8-203ENST00000524927 PTBP1P26599 531 aaKnown RBP eCLIP4.48□□□□□ -1.697e-6■□□□□ 9.8
NEDD8-203ENST00000524927 MAS1LP35410 378 aa4.48□□□□□ -1.69
NEDD8-203ENST00000524927 FAM71F2Q6NXP2 309 aa4.48□□□□□ -1.69
NEDD8-203ENST00000524927 ZNF705AQ6ZN79 300 aaPredicted RBP4.48□□□□□ -1.69
NEDD8-203ENST00000524927 TMEM17Q86X19 198 aa4.48□□□□□ -1.69
NEDD8-203ENST00000524927 OR6N2Q8NGY6 317 aa4.48□□□□□ -1.69
NEDD8-203ENST00000524927 PLPPR1Q8TBJ4 325 aa4.48□□□□□ -1.69
NEDD8-203ENST00000524927 CIRBP-AS1Q8TBR5 109 aa4.48□□□□□ -1.69
NEDD8-203ENST00000524927 FANK1Q8TC84 345 aa4.48□□□□□ -1.69
NEDD8-203ENST00000524927 OR2A7Q96R45 310 aa4.48□□□□□ -1.69
NEDD8-203ENST00000524927 ANKRD19PQ9H560 264 aa4.48□□□□□ -1.69
NEDD8-203ENST00000524927 WASHC3Q9Y3C0 194 aa4.48□□□□□ -1.69
NEDD8-203ENST00000524927 TMEM269A0A1B0GVZ9 245 aa4.47□□□□□ -1.69
NEDD8-203ENST00000524927 ZNF705FA8MVS1 300 aaPredicted RBP4.47□□□□□ -1.69
NEDD8-203ENST00000524927 H0YJX3 145 aa4.47□□□□□ -1.69
NEDD8-203ENST00000524927 FFAR1O14842 300 aa4.47□□□□□ -1.69
NEDD8-203ENST00000524927 GATBO75879 557 aaKnown RBP4.47□□□□□ -1.69
NEDD8-203ENST00000524927 OR2J3O76001 311 aa4.47□□□□□ -1.69
NEDD8-203ENST00000524927 CRYGCP07315 174 aa4.47□□□□□ -1.69
NEDD8-203ENST00000524927 ZNF705DP0CH99 300 aaPredicted RBP4.47□□□□□ -1.69
NEDD8-203ENST00000524927 ZNF705BP0CI00 300 aaPredicted RBP4.47□□□□□ -1.69
NEDD8-203ENST00000524927 APELAP0DMC3 54 aa4.47□□□□□ -1.69
NEDD8-203ENST00000524927 RPA2P15927 270 aa4.47□□□□□ -1.69
NEDD8-203ENST00000524927 OMPP47874 163 aa4.47□□□□□ -1.69
NEDD8-203ENST00000524927 DEFB131AP59861 70 aa4.47□□□□□ -1.69
NEDD8-203ENST00000524927 PJVKQ0ZLH3 352 aa4.47□□□□□ -1.69
NEDD8-203ENST00000524927 ESRGQ1W209 222 aa4.47□□□□□ -1.69
NEDD8-203ENST00000524927 Q6ZSR3 168 aa4.47□□□□□ -1.69
NEDD8-203ENST00000524927 Q8N814 137 aa4.47□□□□□ -1.69
NEDD8-203ENST00000524927 EIF1ADQ8N9N8 165 aaKnown RBP4.47□□□□□ -1.69
NEDD8-203ENST00000524927 OR9I1Q8NGQ6 314 aa4.47□□□□□ -1.69
NEDD8-203ENST00000524927 RBPMSQ93062 196 aaKnown RBP4.47□□□□□ -1.69
NEDD8-203ENST00000524927 MRPS24Q96EL2 167 aaKnown RBP4.47□□□□□ -1.69
NEDD8-203ENST00000524927 PHB2Q99623 299 aa4.47□□□□□ -1.69
NEDD8-203ENST00000524927 ZNF436Q9C0F3 470 aaPredicted RBP4.47□□□□□ -1.69
NEDD8-203ENST00000524927 OR52D1Q9H346 318 aa4.47□□□□□ -1.69
NEDD8-203ENST00000524927 EHFQ9NZC4 300 aa4.47□□□□□ -1.69
NEDD8-203ENST00000524927 NUFIP1Q9UHK0 495 aaKnown RBP4.47□□□□□ -1.69
NEDD8-203ENST00000524927 IGHV3OR16-8A0A075B7F1 116 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 IGKV3D-20A0A0C4DH25 116 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 LRCOL1A6NCL2 159 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 A6NIN4 97 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 H0YJW9 148 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 H7C2Y5 167 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 SLC17A2O00624 439 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 SIVA1O15304 175 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 RBP2P50120 134 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 RPL14P50914 215 aaKnown RBP4.46□□□□□ -1.7
NEDD8-203ENST00000524927 PAFAH1B2P68402 229 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 RIPK1Q13546 671 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 LINC01590Q5TEZ4 76 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 ERI1Q8IV48 349 aaKnown RBP4.46□□□□□ -1.7
NEDD8-203ENST00000524927 HSD17B11Q8NBQ5 300 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 OR2T33Q8NG76 320 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 OR6K6Q8NGW6 343 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 TRUB1Q8WWH5 349 aaKnown RBP4.46□□□□□ -1.7
NEDD8-203ENST00000524927 IL1F10Q8WWZ1 152 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 EEF1AKMT3Q96AZ1 226 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 PAXXQ9BUH6 204 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 ING4Q9UNL4 249 aa4.46□□□□□ -1.7
NEDD8-203ENST00000524927 IGKV1-12A0A0C4DH73 117 aa4.45□□□□□ -1.7
NEDD8-203ENST00000524927 TMEM30CPA0ZSE6 113 aa4.45□□□□□ -1.7
NEDD8-203ENST00000524927 E9PLD3 99 aa4.45□□□□□ -1.7
NEDD8-203ENST00000524927 F5H768 121 aa4.45□□□□□ -1.7
NEDD8-203ENST00000524927 K7EMT4 169 aa4.45□□□□□ -1.7
NEDD8-203ENST00000524927 IGKV1D-12P01611 117 aa4.45□□□□□ -1.7
NEDD8-203ENST00000524927 IGHV3-23P01764 117 aa4.45□□□□□ -1.7
NEDD8-203ENST00000524927 TTRP02766 147 aa4.45□□□□□ -1.7
NEDD8-203ENST00000524927 GYPBP06028 91 aa4.45□□□□□ -1.7
NEDD8-203ENST00000524927 SAA2P0DJI9 122 aaPredicted RBP4.45□□□□□ -1.7
NEDD8-203ENST00000524927 CT45A6P0DMU7 189 aa4.45□□□□□ -1.7
NEDD8-203ENST00000524927 CT45A5P0DMU8 189 aa4.45□□□□□ -1.7
NEDD8-203ENST00000524927 CT45A7P0DMV0 189 aa4.45□□□□□ -1.7
NEDD8-203ENST00000524927 SPI1P17947 270 aa4.45□□□□□ -1.7
NEDD8-203ENST00000524927 FGF9P31371 208 aaPredicted RBP4.45□□□□□ -1.7
NEDD8-203ENST00000524927 YAP1P46937 504 aaKnown RBP4.45□□□□□ -1.7
NEDD8-203ENST00000524927 SLC18A1P54219 525 aa4.45□□□□□ -1.7
NEDD8-203ENST00000524927 KRTAP10-8P60410 259 aa4.45□□□□□ -1.7
NEDD8-203ENST00000524927 RPL8P62917 257 aaKnown RBP4.45□□□□□ -1.7
NEDD8-203ENST00000524927 Q1RN00 199 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms