RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 AKR1C8PQ5T2L2 129 aa5.7□□□□□ -1.5
VPS11-201ENST00000524454 FAM53AQ6NSI3 398 aaPredicted RBP5.7□□□□□ -1.5
VPS11-201ENST00000524454 CCDC144NLQ6NUI1 221 aa5.7□□□□□ -1.5
VPS11-201ENST00000524454 SLC25A24Q6NUK1 477 aa5.7□□□□□ -1.5
VPS11-201ENST00000524454 TEX45Q8NA69 505 aa5.7□□□□□ -1.5
VPS11-201ENST00000524454 HSD17B11Q8NBQ5 300 aa5.7□□□□□ -1.5
VPS11-201ENST00000524454 OR1L8Q8NGR8 309 aa5.7□□□□□ -1.5
VPS11-201ENST00000524454 TAF15Q92804 592 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS11-201ENST00000524454 BSCL2Q96G97 398 aaPredicted RBP5.7□□□□□ -1.5
VPS11-201ENST00000524454 HARBI1Q96MB7 349 aa5.7□□□□□ -1.5
VPS11-201ENST00000524454 OR4C12Q96R67 309 aa5.7□□□□□ -1.5
VPS11-201ENST00000524454 SSBP3Q9BWW4 388 aaPredicted RBP5.7□□□□□ -1.5
VPS11-201ENST00000524454 QTRT1Q9BXR0 403 aaKnown RBP5.7□□□□□ -1.5
VPS11-201ENST00000524454 SEC11CQ9BY50 192 aa5.7□□□□□ -1.5
VPS11-201ENST00000524454 MRPL20Q9BYC9 149 aaKnown RBP5.7□□□□□ -1.5
VPS11-201ENST00000524454 ENY2Q9NPA8 101 aa5.7□□□□□ -1.5
VPS11-201ENST00000524454 KIAA1456Q9P272 454 aa5.7□□□□□ -1.5
VPS11-201ENST00000524454 CARHSP1Q9Y2V2 147 aaKnown RBP5.7□□□□□ -1.5
VPS11-201ENST00000524454 SOX21Q9Y651 276 aaPredicted RBP5.7□□□□□ -1.5
VPS11-201ENST00000524454 C15orf62A8K5M9 175 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 ODF3BA8MYP8 253 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 PRSS46E5RG02 174 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 H3BP45 60 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 LY6LH3BQJ8 138 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 FOXH1O75593 365 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 PRH1P02810 166 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 IGKV1-16P04430 117 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 SNCAP37840 140 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 RPL8P62917 257 aaKnown RBP5.69□□□□□ -1.5
VPS11-201ENST00000524454 TMEM267Q0VDI3 215 aaPredicted RBP5.69□□□□□ -1.5
VPS11-201ENST00000524454 PEA15Q15121 130 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 IZUMO4Q1ZYL8 232 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 C2orf83Q53S99 150 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 TMEM41BQ5BJD5 291 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 MINOS1Q5TGZ0 78 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 HAPLN4Q86UW8 402 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 SVBPQ8N300 66 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 TMEM217Q8N7C4 229 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 ZNF114Q8NC26 417 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 SLC24A4Q8NFF2 622 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 OR10G4Q8NGN3 311 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 MBD3L1Q8WWY6 194 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 CACNG8Q8WXS5 425 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 LEAP2Q969E1 77 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 MS4A7Q9GZW8 240 aaPredicted RBP5.69□□□□□ -1.5
VPS11-201ENST00000524454 PLEKHA3Q9HB20 300 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 HEYLQ9NQ87 328 aaPredicted RBP5.69□□□□□ -1.5
VPS11-201ENST00000524454 WDR83OSQ9Y284 106 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 OR51B2Q9Y5P1 312 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 MINOS1-NBL1R4GNA1 71 aa5.69□□□□□ -1.5
VPS11-201ENST00000524454 FBN1P35555 2871 aaKnown RBP5.69□□□□□ -1.5
VPS11-201ENST00000524454 DOCK11Q5JSL3 2073 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 JMJD1CQ15652 2540 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 C22orf46C9J442 243 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 VENTXO95231 258 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 SAA1P0DJI8 122 aaPredicted RBP5.68□□□□□ -1.5
VPS11-201ENST00000524454 NPY1RP25929 384 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 CD1BP29016 333 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 GPX4P36969 197 aaPredicted RBP5.68□□□□□ -1.5
VPS11-201ENST00000524454 HOXA1P49639 335 aaPredicted RBP5.68□□□□□ -1.5
VPS11-201ENST00000524454 PPT1P50897 306 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 PRB3Q04118 309 aaPredicted RBP5.68□□□□□ -1.5
VPS11-201ENST00000524454 ZNF616Q08AN1 781 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 ARL16Q0P5N6 197 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 RAB31Q13636 194 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 SSX2Q16385 188 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 KLF17Q5JT82 389 aaPredicted RBP5.68□□□□□ -1.5
VPS11-201ENST00000524454 PVRIGQ6DKI7 326 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 TMEM182Q6ZP80 229 aaPredicted RBP5.68□□□□□ -1.5
VPS11-201ENST00000524454 MMD2Q8IY49 270 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 BCL6BQ8N143 479 aaPredicted RBP5.68□□□□□ -1.5
VPS11-201ENST00000524454 ZNF709Q8N972 641 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 OR4P4Q8NGL7 312 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 SUN5Q8TC36 379 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 RNASEH2CQ8TDP1 164 aaKnown RBP5.68□□□□□ -1.5
VPS11-201ENST00000524454 PCNPQ8WW12 178 aaKnown RBP5.68□□□□□ -1.5
VPS11-201ENST00000524454 C19orf24Q9BVV8 132 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 COMMD5Q9GZQ3 224 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 SH3BGRL3Q9H299 93 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 NDUFA4L2Q9NRX3 87 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 TBL2Q9Y4P3 447 aaKnown RBP5.68□□□□□ -1.5
VPS11-201ENST00000524454 INSIG2Q9Y5U4 225 aa5.68□□□□□ -1.5
VPS11-201ENST00000524454 DNHD1Q96M86 4753 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 IGHV1-3A0A0C4DH29 117 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 IGHV2-70DA0A0C4DH43 119 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 UBE2L5PA0A1B0GUS4 154 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 A0A1W2PPE3 182 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 MEX3AA1L020 520 aaKnown RBP5.67□□□□□ -1.5
VPS11-201ENST00000524454 SEC14L6B5MCN3 397 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 RNASEK-C17orf49H0YIS7 233 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 J3QLI3 93 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 CORTO00230 105 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 TCF21O43680 179 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 FSHBP01225 129 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 IFNA1P01562 189 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 IFNA10P01566 189 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 IGLV2-23P01705 113 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 HSPB1P04792 205 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms