RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 OR4A8P0C604 315 aa9.03□□□□□ -0.96
HDAC9-228ENST00000524023 IRF2P14316 349 aa9.03□□□□□ -0.96
HDAC9-228ENST00000524023 CEACAM8P31997 349 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-228ENST00000524023 PSG5Q15238 335 aa9.03□□□□□ -0.96
HDAC9-228ENST00000524023 IQCJQ1A5X6 159 aa9.03□□□□□ -0.96
HDAC9-228ENST00000524023 ZNF600Q6ZNG1 722 aa9.03□□□□□ -0.96
HDAC9-228ENST00000524023 TMEM167BQ9NRX6 74 aa9.03□□□□□ -0.96
HDAC9-228ENST00000524023 BET1LQ9NYM9 111 aa9.03□□□□□ -0.96
HDAC9-228ENST00000524023 CUL9Q8IWT3 2517 aa9.03□□□□□ -0.96
HDAC9-228ENST00000524023 A8MXE2 369 aa9.03□□□□□ -0.96
HDAC9-228ENST00000524023 SAA1P0DJI8 122 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-228ENST00000524023 GATA2P23769 480 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-228ENST00000524023 OR10J1P30954 320 aa9.03□□□□□ -0.96
HDAC9-228ENST00000524023 ATP5IP56385 69 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-228ENST00000524023 SSX2Q16385 188 aa9.03□□□□□ -0.96
HDAC9-228ENST00000524023 RND1Q92730 232 aa9.03□□□□□ -0.96
HDAC9-228ENST00000524023 ZNF503Q96F45 646 aa9.03□□□□□ -0.96
HDAC9-228ENST00000524023 SLC35E1Q96K37 410 aa9.03□□□□□ -0.96
HDAC9-228ENST00000524023 FKBP11Q9NYL4 201 aa9.03□□□□□ -0.96
HDAC9-228ENST00000524023 TECRQ9NZ01 308 aaKnown RBP9.03□□□□□ -0.96
HDAC9-228ENST00000524023 LINC00312Q9Y6C7 94 aa9.03□□□□□ -0.96
HDAC9-228ENST00000524023 CEP250Q9BV73 2442 aa9.02□□□□□ -0.96
HDAC9-228ENST00000524023 RNASE2P10153 161 aaKnown RBP9.02□□□□□ -0.97
HDAC9-228ENST00000524023 NDUFB7P17568 137 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 CBLN1P23435 193 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 LGALS4P56470 323 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 SELENOTP62341 195 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 ZNF833PQ6ZTB9 187 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 NUP37Q8NFH4 326 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 OR1L8Q8NGR8 309 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 OR5B3Q8NH48 314 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 A0A1B0GV90 55 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 GRIFINA4D1Z8 144 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 HELTA6NFD8 242 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 OR5G3P0C626 314 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 CRYBB3P26998 211 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 ERVFC1-1P60608 527 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 RAB4BP61018 213 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 CCL8P80075 99 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 OR5I1Q13606 314 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 MLANAQ16655 118 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 RPEL1Q2QD12 228 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 PQLC2Q6ZP29 291 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 PNKDQ8N490 385 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 RBMXL3Q8N7X1 1067 aaKnown RBP9.02□□□□□ -0.97
HDAC9-228ENST00000524023 OR10W1Q8NGF6 305 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 OSR1Q8TAX0 266 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-228ENST00000524023 NDUFAF3Q9BU61 184 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 C19orf24Q9BVV8 132 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 V9GYV3 84 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 ZNF292O60281 2723 aa9.02□□□□□ -0.97
HDAC9-228ENST00000524023 NKX6-3A6NJ46 265 aa9.01□□□□□ -0.97
HDAC9-228ENST00000524023 K7EM74 188 aa9.01□□□□□ -0.97
HDAC9-228ENST00000524023 OR7C2O60412 319 aa9.01□□□□□ -0.97
HDAC9-228ENST00000524023 CRYABP02511 175 aaKnown RBP9.01□□□□□ -0.97
HDAC9-228ENST00000524023 GNG4P50150 75 aa9.01□□□□□ -0.97
HDAC9-228ENST00000524023 CD69Q07108 199 aa9.01□□□□□ -0.97
HDAC9-228ENST00000524023 CENPWQ5EE01 88 aa9.01□□□□□ -0.97
HDAC9-228ENST00000524023 MMD2Q8IY49 270 aa9.01□□□□□ -0.97
HDAC9-228ENST00000524023 BEND2Q8NDZ0 799 aa9.01□□□□□ -0.97
HDAC9-228ENST00000524023 OR9G1Q8NH87 305 aa9.01□□□□□ -0.97
HDAC9-228ENST00000524023 MRPL20Q9BYC9 149 aaKnown RBP9.01□□□□□ -0.97
HDAC9-228ENST00000524023 MRPL18Q9H0U6 180 aaKnown RBP9.01□□□□□ -0.97
HDAC9-228ENST00000524023 GAL3ST2Q9H3Q3 398 aa9.01□□□□□ -0.97
HDAC9-228ENST00000524023 TP53TG3Q9ULZ0 132 aa9.01□□□□□ -0.97
HDAC9-228ENST00000524023 AKAP13Q12802 2813 aa9.01□□□□□ -0.97
HDAC9-228ENST00000524023 BSNQ9UPA5 3926 aa9.01□□□□□ -0.97
HDAC9-228ENST00000524023 SCGB1D1O95968 90 aa9□□□□□ -0.97
HDAC9-228ENST00000524023 TNFRSF1AP19438 455 aa9□□□□□ -0.97
HDAC9-228ENST00000524023 TAS2R45P59539 299 aa9□□□□□ -0.97
HDAC9-228ENST00000524023 MEF2CQ06413 473 aaPredicted RBP9□□□□□ -0.97
HDAC9-228ENST00000524023 KRTCAP3Q53RY4 240 aa9□□□□□ -0.97
HDAC9-228ENST00000524023 OR1L6Q8NGR2 347 aa9□□□□□ -0.97
HDAC9-228ENST00000524023 CMTM2Q8TAZ6 248 aa9□□□□□ -0.97
HDAC9-228ENST00000524023 FAM57AQ8TBR7 257 aa9□□□□□ -0.97
HDAC9-228ENST00000524023 HARBI1Q96MB7 349 aa9□□□□□ -0.97
HDAC9-228ENST00000524023 MS4A10Q96PG2 267 aa9□□□□□ -0.97
HDAC9-228ENST00000524023 NDUFA4L2Q9NRX3 87 aa9□□□□□ -0.97
HDAC9-228ENST00000524023 MAP1BP46821 2468 aaKnown RBP9□□□□□ -0.97
HDAC9-228ENST00000524023 GGTLC3B5MD39 225 aa9□□□□□ -0.97
HDAC9-228ENST00000524023 H0YJW9 148 aa9□□□□□ -0.97
HDAC9-228ENST00000524023 APOA2P02652 100 aa9□□□□□ -0.97
HDAC9-228ENST00000524023 OR10J4P0C629 311 aa9□□□□□ -0.97
HDAC9-228ENST00000524023 FRMD6-AS1P0C7T7 363 aa9□□□□□ -0.97
HDAC9-228ENST00000524023 LINC00310P59036 64 aa9□□□□□ -0.97
HDAC9-228ENST00000524023 LBHQ53QV2 105 aaPredicted RBP9□□□□□ -0.97
HDAC9-228ENST00000524023 C2orf88Q9BSF0 95 aa9□□□□□ -0.97
HDAC9-228ENST00000524023 SLC25A33Q9BSK2 321 aa9□□□□□ -0.97
HDAC9-228ENST00000524023 C17orf100A8MU93 164 aa8.99□□□□□ -0.97
HDAC9-228ENST00000524023 DLL1O00548 723 aa8.99□□□□□ -0.97
HDAC9-228ENST00000524023 FCN3O75636 299 aa8.99□□□□□ -0.97
HDAC9-228ENST00000524023 C8orf88P0DMB2 117 aa8.99□□□□□ -0.97
HDAC9-228ENST00000524023 CRISP2P16562 243 aa8.99□□□□□ -0.97
HDAC9-228ENST00000524023 CCL3L1P16619 93 aa8.99□□□□□ -0.97
HDAC9-228ENST00000524023 CHRNB4P30926 498 aa8.99□□□□□ -0.97
HDAC9-228ENST00000524023 IER3P46695 156 aa8.99□□□□□ -0.97
HDAC9-228ENST00000524023 TMEM177Q53S58 311 aa8.99□□□□□ -0.97
HDAC9-228ENST00000524023 TMEM108Q6UXF1 575 aa8.99□□□□□ -0.97
HDAC9-228ENST00000524023 DOLPP1Q86YN1 238 aa8.99□□□□□ -0.97
HDAC9-228ENST00000524023 OR8I2Q8N0Y5 310 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms