RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 GABARAPO95166 117 aa15.5■□□□□ 0.07
SDCBP-209ENST00000522243 ELLP55199 621 aaPredicted RBP15.5■□□□□ 0.07
SDCBP-209ENST00000522243 UCP3P55916 312 aa15.5■□□□□ 0.07
SDCBP-209ENST00000522243 GPR107Q5VW38 600 aa15.5■□□□□ 0.07
SDCBP-209ENST00000522243 RBPMS2Q6ZRY4 209 aaKnown RBP15.5■□□□□ 0.07
SDCBP-209ENST00000522243 H2BFWTQ7Z2G1 175 aa15.5■□□□□ 0.07
SDCBP-209ENST00000522243 TMEM190Q8WZ59 177 aa15.5■□□□□ 0.07
SDCBP-209ENST00000522243 MRGPRFQ96AM1 343 aa15.5■□□□□ 0.07
SDCBP-209ENST00000522243 BSCL2Q96G97 398 aaPredicted RBP15.5■□□□□ 0.07
SDCBP-209ENST00000522243 SEC22AQ96IW7 307 aa15.5■□□□□ 0.07
SDCBP-209ENST00000522243 CHRDL1Q9BU40 450 aa15.5■□□□□ 0.07
SDCBP-209ENST00000522243 TMEM14BQ9NUH8 114 aa15.5■□□□□ 0.07
SDCBP-209ENST00000522243 EXTL2Q9UBQ6 330 aa15.5■□□□□ 0.07
SDCBP-209ENST00000522243 F8W735 103 aaPredicted RBP15.49■□□□□ 0.07
SDCBP-209ENST00000522243 PI3P19957 117 aa15.49■□□□□ 0.07
SDCBP-209ENST00000522243 Q56UQ5 140 aa15.49■□□□□ 0.07
SDCBP-209ENST00000522243 OR52I2Q8NH67 350 aa15.49■□□□□ 0.07
SDCBP-209ENST00000522243 OR4A16Q8NH70 328 aa15.49■□□□□ 0.07
SDCBP-209ENST00000522243 AP3S1Q92572 193 aa15.49■□□□□ 0.07
SDCBP-209ENST00000522243 C20orf24Q9BUV8 137 aa15.49■□□□□ 0.07
SDCBP-209ENST00000522243 FAM212BQ9NTI7 297 aaPredicted RBP15.49■□□□□ 0.07
SDCBP-209ENST00000522243 TRAV25A0A0B4J276 109 aa15.48■□□□□ 0.07
SDCBP-209ENST00000522243 ZNF207O43670 478 aaKnown RBP15.48■□□□□ 0.07
SDCBP-209ENST00000522243 PGAM2P15259 253 aa15.48■□□□□ 0.07
SDCBP-209ENST00000522243 ZNF182P17025 639 aaPredicted RBP15.48■□□□□ 0.07
SDCBP-209ENST00000522243 ADMP35318 185 aa15.48■□□□□ 0.07
SDCBP-209ENST00000522243 IZUMO4Q1ZYL8 232 aa15.48■□□□□ 0.07
SDCBP-209ENST00000522243 ANKRD55Q3KP44 614 aa15.48■□□□□ 0.07
SDCBP-209ENST00000522243 RNASE10Q5GAN6 216 aaKnown RBP15.48■□□□□ 0.07
SDCBP-209ENST00000522243 OR1L6Q8NGR2 347 aa15.48■□□□□ 0.07
SDCBP-209ENST00000522243 SPSB3Q6PJ21 355 aa15.47■□□□□ 0.07
SDCBP-209ENST00000522243 OR2C3Q8N628 320 aa15.47■□□□□ 0.07
SDCBP-209ENST00000522243 MISP3Q96FF7 219 aa15.47■□□□□ 0.07
SDCBP-209ENST00000522243 NDUFA4O00483 81 aa15.46■□□□□ 0.07
SDCBP-209ENST00000522243 CD3DP04234 171 aa15.46■□□□□ 0.07
SDCBP-209ENST00000522243 PPP5CP53041 499 aa15.46■□□□□ 0.07
SDCBP-209ENST00000522243 SPINK9Q5DT21 86 aa15.46■□□□□ 0.07
SDCBP-209ENST00000522243 OR1P1Q8NH06 330 aa15.46■□□□□ 0.07
SDCBP-209ENST00000522243 ABHD1Q96SE0 405 aa15.46■□□□□ 0.07
SDCBP-209ENST00000522243 C5orf66Q9H5L9 145 aa15.46■□□□□ 0.07
SDCBP-209ENST00000522243 DAZ1Q9NQZ3 744 aaKnown RBP15.46■□□□□ 0.07
SDCBP-209ENST00000522243 UBQLN2Q9UHD9 624 aa15.46■□□□□ 0.07
SDCBP-209ENST00000522243 LCE6AA0A183 80 aa15.45■□□□□ 0.06
SDCBP-209ENST00000522243 IGHV3-48P01763 117 aa15.45■□□□□ 0.06
SDCBP-209ENST00000522243 PIGPP57054 158 aa15.45■□□□□ 0.06
SDCBP-209ENST00000522243 LHFPL1Q86WI0 220 aa15.45■□□□□ 0.06
SDCBP-209ENST00000522243 GGTLC1Q9BX51 225 aa15.45■□□□□ 0.06
SDCBP-209ENST00000522243 MTFP1Q9UDX5 166 aa15.45■□□□□ 0.06
SDCBP-209ENST00000522243 LOC102724200A0A096LPH7 203 aaPredicted RBP15.44■□□□□ 0.06
SDCBP-209ENST00000522243 CTSGP08311 255 aa15.44■□□□□ 0.06
SDCBP-209ENST00000522243 RND3P61587 244 aa15.44■□□□□ 0.06
SDCBP-209ENST00000522243 HSPE1P61604 102 aaKnown RBP15.44■□□□□ 0.06
SDCBP-209ENST00000522243 PRCDQ00LT1 54 aa15.44■□□□□ 0.06
SDCBP-209ENST00000522243 OR4D10Q8NGI6 311 aa15.44■□□□□ 0.06
SDCBP-209ENST00000522243 PINX1Q96BK5 328 aaKnown RBP15.44■□□□□ 0.06
SDCBP-209ENST00000522243 TP53RKQ96S44 253 aa15.44■□□□□ 0.06
SDCBP-209ENST00000522243 ATP6V0BQ99437 205 aa15.44■□□□□ 0.06
SDCBP-209ENST00000522243 MIXL1Q9H2W2 232 aa15.44■□□□□ 0.06
SDCBP-209ENST00000522243 DNAH7Q8WXX0 4024 aa15.44■□□□□ 0.06
SDCBP-209ENST00000522243 I3L2K1 104 aa15.43■□□□□ 0.06
SDCBP-209ENST00000522243 MT-CO2P00403 227 aa15.43■□□□□ 0.06
SDCBP-209ENST00000522243 ARRDC1Q8N5I2 433 aa15.43■□□□□ 0.06
SDCBP-209ENST00000522243 ZNF486Q96H40 463 aaPredicted RBP15.43■□□□□ 0.06
SDCBP-209ENST00000522243 ZNF414Q96IQ9 312 aa15.43■□□□□ 0.06
SDCBP-209ENST00000522243 SPAG8Q99932 426 aaPredicted RBP15.43■□□□□ 0.06
SDCBP-209ENST00000522243 K7EMT4 169 aa15.42■□□□□ 0.06
SDCBP-209ENST00000522243 TSPAN4O14817 238 aa15.42■□□□□ 0.06
SDCBP-209ENST00000522243 NUPL2O15504 423 aaKnown RBP15.42■□□□□ 0.06
SDCBP-209ENST00000522243 IGKV1-5P01602 117 aa15.42■□□□□ 0.06
SDCBP-209ENST00000522243 AKR1C2P52895 323 aa15.42■□□□□ 0.06
SDCBP-209ENST00000522243 MFAP4P55083 255 aa15.42■□□□□ 0.06
SDCBP-209ENST00000522243 ERHP84090 104 aaKnown RBP15.42■□□□□ 0.06
SDCBP-209ENST00000522243 SP6Q3SY56 376 aa15.42■□□□□ 0.06
SDCBP-209ENST00000522243 SCGB2B2Q4G0G5 96 aa15.42■□□□□ 0.06
SDCBP-209ENST00000522243 LAMTOR1Q6IAA8 161 aa15.42■□□□□ 0.06
SDCBP-209ENST00000522243 GPR141Q7Z602 305 aa15.42■□□□□ 0.06
SDCBP-209ENST00000522243 MRPS26Q9BYN8 205 aaKnown RBP15.42■□□□□ 0.06
SDCBP-209ENST00000522243 TENM2Q9NT68 2774 aa15.42■□□□□ 0.06
SDCBP-209ENST00000522243 IGHV3-49A0A0A0MS15 119 aa15.41■□□□□ 0.06
SDCBP-209ENST00000522243 C3orf85A0A1B0GTC6 90 aa15.41■□□□□ 0.06
SDCBP-209ENST00000522243 CTDSP2O14595 271 aa15.41■□□□□ 0.06
SDCBP-209ENST00000522243 RGS5O15539 181 aa15.41■□□□□ 0.06
SDCBP-209ENST00000522243 YIF1AO95070 293 aa15.41■□□□□ 0.06
SDCBP-209ENST00000522243 RAB3DO95716 219 aa15.41■□□□□ 0.06
SDCBP-209ENST00000522243 CTSDP07339 412 aaPredicted RBP15.41■□□□□ 0.06
SDCBP-209ENST00000522243 SPCS2Q15005 226 aa15.41■□□□□ 0.06
SDCBP-209ENST00000522243 TMEM229BQ8NBD8 167 aa15.41■□□□□ 0.06
SDCBP-209ENST00000522243 ZNF114Q8NC26 417 aa15.41■□□□□ 0.06
SDCBP-209ENST00000522243 COPZ2Q9P299 210 aa15.41■□□□□ 0.06
SDCBP-209ENST00000522243 C15orf62A8K5M9 175 aa15.4■□□□□ 0.06
SDCBP-209ENST00000522243 ALDH3B2P48448 385 aa15.4■□□□□ 0.06
SDCBP-209ENST00000522243 TAS2R19P59542 299 aa15.4■□□□□ 0.06
SDCBP-209ENST00000522243 RELQ04864 619 aaPredicted RBP15.4■□□□□ 0.06
SDCBP-209ENST00000522243 TRIM16LQ309B1 348 aa15.4■□□□□ 0.06
SDCBP-209ENST00000522243 FAAP20Q6NZ36 180 aa15.4■□□□□ 0.06
SDCBP-209ENST00000522243 OR13C8Q8NGS7 320 aa15.4■□□□□ 0.06
SDCBP-209ENST00000522243 MARCH1Q8TCQ1 289 aa15.4■□□□□ 0.06
SDCBP-209ENST00000522243 OVOL2Q9BRP0 275 aa15.4■□□□□ 0.06
SDCBP-209ENST00000522243 SMPXQ9UHP9 88 aa15.4■□□□□ 0.06
SDCBP-209ENST00000522243 A0A0B4J293 547 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms