RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 ARSJQ5FYB0 599 aaPredicted RBP9.26□□□□□ -0.93
CLK4-206ENST00000520878 SPNS3Q6ZMD2 512 aa9.26□□□□□ -0.93
CLK4-206ENST00000520878 SLC16A13Q7RTY0 426 aa9.26□□□□□ -0.93
CLK4-206ENST00000520878 TMEM37Q8WXS4 190 aa9.26□□□□□ -0.93
CLK4-206ENST00000520878 NABP2Q9BQ15 211 aa9.26□□□□□ -0.93
CLK4-206ENST00000520878 SCRT1Q9BWW7 348 aa9.26□□□□□ -0.93
CLK4-206ENST00000520878 TMEM133Q9H2Q1 129 aa9.26□□□□□ -0.93
CLK4-206ENST00000520878 FBXL15Q9H469 300 aa9.26□□□□□ -0.93
CLK4-206ENST00000520878 METTL1Q9UBP6 276 aaKnown RBP9.26□□□□□ -0.93
CLK4-206ENST00000520878 TRAV1-1A0A0B4J248 108 aa9.26□□□□□ -0.93
CLK4-206ENST00000520878 F6UZH7 168 aa9.26□□□□□ -0.93
CLK4-206ENST00000520878 H0YJW9 148 aa9.26□□□□□ -0.93
CLK4-206ENST00000520878 CXorf1O96002 111 aa9.26□□□□□ -0.93
CLK4-206ENST00000520878 USF1P22415 310 aaPredicted RBP9.26□□□□□ -0.93
CLK4-206ENST00000520878 FAM3BP58499 235 aaPredicted RBP9.26□□□□□ -0.93
CLK4-206ENST00000520878 CD81P60033 236 aa9.26□□□□□ -0.93
CLK4-206ENST00000520878 RAB4BP61018 213 aa9.26□□□□□ -0.93
CLK4-206ENST00000520878 SSX2Q16385 188 aa9.26□□□□□ -0.93
CLK4-206ENST00000520878 MIR17HGQ75NE6 70 aa9.26□□□□□ -0.93
CLK4-206ENST00000520878 BLNKQ8WV28 456 aa9.26□□□□□ -0.93
CLK4-206ENST00000520878 P0C879 139 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 RND2P52198 227 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 SUMO1P63165 101 aaKnown RBP9.25□□□□□ -0.93
CLK4-206ENST00000520878 HABP2Q14520 560 aaPredicted RBP9.25□□□□□ -0.93
CLK4-206ENST00000520878 FAM90A2PQ658T7 463 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 MALSU1Q96EH3 234 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 SSX3Q99909 188 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 CLEC7AQ9BXN2 247 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 TOLLIPQ9H0E2 274 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 ZNF430Q9H8G1 570 aaPredicted RBP9.25□□□□□ -0.93
CLK4-206ENST00000520878 ZZEF1O43149 2961 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 PMS2P5A8MQ11 134 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 CXCL1P09341 107 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 CDSNQ15517 529 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 OR4X1Q8NH49 305 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 OR52E5Q8NH55 327 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 P2RX4Q99571 388 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 DERL1Q9BUN8 251 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 SDF2L1Q9HCN8 221 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 FOXA2Q9Y261 457 aaPredicted RBP9.25□□□□□ -0.93
CLK4-206ENST00000520878 PKD1L2Q7Z442 2459 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 ZNF320A2RRD8 509 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 FOXH1O75593 365 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 LINC00869P0C866 280 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 MC5RP33032 325 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 RPL27AP46776 148 aaKnown RBP9.25□□□□□ -0.93
CLK4-206ENST00000520878 PRCDQ00LT1 54 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 C19orf35Q6ZS72 473 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 MRPL41Q8IXM3 137 aaKnown RBP9.25□□□□□ -0.93
CLK4-206ENST00000520878 OR1B1Q8NGR6 318 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 OR5B3Q8NH48 314 aa9.25□□□□□ -0.93
CLK4-206ENST00000520878 CREBBPQ92793 2442 aa9.24□□□□□ -0.93
CLK4-206ENST00000520878 A0A1W2PN81 502 aa9.24□□□□□ -0.93
CLK4-206ENST00000520878 H3BTX0 84 aa9.24□□□□□ -0.93
CLK4-206ENST00000520878 DLL1O00548 723 aa9.24□□□□□ -0.93
CLK4-206ENST00000520878 MOSP00540 346 aa9.24□□□□□ -0.93
CLK4-206ENST00000520878 RBP4P02753 201 aa9.24□□□□□ -0.93
CLK4-206ENST00000520878 GPR6P46095 362 aaPredicted RBP9.24□□□□□ -0.93
CLK4-206ENST00000520878 NIT2Q9NQR4 276 aa9.24□□□□□ -0.93
CLK4-206ENST00000520878 TPSG1Q9NRR2 321 aa9.24□□□□□ -0.93
CLK4-206ENST00000520878 S4R3C0 116 aa9.24□□□□□ -0.93
CLK4-206ENST00000520878 CSPG4Q6UVK1 2322 aa9.24□□□□□ -0.93
CLK4-206ENST00000520878 A0A1B0GW64 132 aa9.24□□□□□ -0.93
CLK4-206ENST00000520878 CNTFRP26992 372 aa9.24□□□□□ -0.93
CLK4-206ENST00000520878 TAS2R45P59539 299 aa9.24□□□□□ -0.93
CLK4-206ENST00000520878 ST6GALNAC3Q8NDV1 305 aa9.24□□□□□ -0.93
CLK4-206ENST00000520878 DDB2Q92466 427 aa9.24□□□□□ -0.93
CLK4-206ENST00000520878 TMEM14BQ9NUH8 114 aa9.24□□□□□ -0.93
CLK4-206ENST00000520878 NDUFS7O75251 213 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 RD3LP0DJH9 198 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 UBE2L3P68036 154 aaKnown RBP9.23□□□□□ -0.93
CLK4-206ENST00000520878 EFNB3Q15768 340 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 KCNIP4Q6PIL6 250 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 SGK494Q96LW2 274 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 FAM103A1Q9BTL3 118 aaKnown RBP9.23□□□□□ -0.93
CLK4-206ENST00000520878 ZNF355PQ9NSJ1 428 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 SLC45A2Q9UMX9 530 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 IGHV2-26A0A0B4J1V2 119 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 SCO2A0A1W2PP80 73 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 PPP1R2P9O14990 202 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 PRB4P10163 310 aaPredicted RBP9.23□□□□□ -0.93
CLK4-206ENST00000520878 KLRD1Q13241 179 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 CR1LQ2VPA4 569 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 PRR27Q6MZM9 219 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 ZNF439Q8NDP4 499 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 FAM90A9PA6NNJ1 464 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 B4DEV8 164 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 LIPFP07098 398 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 GCHFRP30047 84 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 RPL23P62829 140 aaKnown RBP9.23□□□□□ -0.93
CLK4-206ENST00000520878 ELOBQ15370 118 aa9.23□□□□□ -0.93
CLK4-206ENST00000520878 DMRTC2Q8IXT2 367 aaPredicted RBP9.23□□□□□ -0.93
CLK4-206ENST00000520878 TECRQ9NZ01 308 aaKnown RBP9.23□□□□□ -0.93
CLK4-206ENST00000520878 AP4M1O00189 453 aa9.22□□□□□ -0.93
CLK4-206ENST00000520878 ERVFC1-1P60608 527 aa9.22□□□□□ -0.93
CLK4-206ENST00000520878 GAMTQ14353 236 aa9.22□□□□□ -0.93
CLK4-206ENST00000520878 TMEM30BQ3MIR4 351 aa9.22□□□□□ -0.93
CLK4-206ENST00000520878 PDPNQ86YL7 162 aa9.22□□□□□ -0.93
CLK4-206ENST00000520878 ZNF596Q8TC21 504 aa9.22□□□□□ -0.93
CLK4-206ENST00000520878 RITA1Q96K30 269 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms