RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 GAGE12GP0CL81 117 aa13.28□□□□□ -0.28
UBR5-207ENST00000520539 GAGE12IP0CL82 117 aa13.28□□□□□ -0.28
UBR5-207ENST00000520539 SAA1P0DJI8 122 aaPredicted RBP13.28□□□□□ -0.28
UBR5-207ENST00000520539 FOXA3P55318 350 aaPredicted RBP13.28□□□□□ -0.28
UBR5-207ENST00000520539 NPC2P61916 151 aa13.28□□□□□ -0.28
UBR5-207ENST00000520539 GAGE4Q13068 117 aa13.28□□□□□ -0.28
UBR5-207ENST00000520539 ADAMTSL5Q6ZMM2 481 aa13.28□□□□□ -0.28
UBR5-207ENST00000520539 DENND4AQ7Z401 1863 aa13.28□□□□□ -0.28
UBR5-207ENST00000520539 C9orf172C9J069 976 aa13.28□□□□□ -0.28
UBR5-207ENST00000520539 LOC105371242A0A075B767 164 aa13.27□□□□□ -0.28
UBR5-207ENST00000520539 PPIAL4CA0A0B4J2A2 164 aa13.27□□□□□ -0.28
UBR5-207ENST00000520539 PPIAL4GP0DN37 164 aa13.27□□□□□ -0.28
UBR5-207ENST00000520539 TM4SF1P30408 202 aa13.27□□□□□ -0.28
UBR5-207ENST00000520539 IL6RP08887 468 aaPredicted RBP13.27□□□□□ -0.28
UBR5-207ENST00000520539 HIVEP3Q5T1R4 2406 aa13.27□□□□□ -0.28
UBR5-207ENST00000520539 EXPH5Q8NEV8 1989 aa13.27□□□□□ -0.28
UBR5-207ENST00000520539 KIR3DS1Q14943 382 aa13.27□□□□□ -0.28
UBR5-207ENST00000520539 SIGLEC14Q08ET2 396 aa13.27□□□□□ -0.29
UBR5-207ENST00000520539 ALKAL1Q6UXT8 129 aa13.27□□□□□ -0.29
UBR5-207ENST00000520539 CD28P10747 220 aa13.27□□□□□ -0.29
UBR5-207ENST00000520539 GUSBP11Q6P575 273 aa13.27□□□□□ -0.29
UBR5-207ENST00000520539 MRPL55Q7Z7F7 128 aaKnown RBP13.27□□□□□ -0.29
UBR5-207ENST00000520539 ELSPBP1Q96BH3 223 aa13.27□□□□□ -0.29
UBR5-207ENST00000520539 C5orf66Q9H5L9 145 aa13.27□□□□□ -0.29
UBR5-207ENST00000520539 SNAI2O43623 268 aa13.27□□□□□ -0.29
UBR5-207ENST00000520539 DSCAML1Q8TD84 2053 aa13.27□□□□□ -0.29
UBR5-207ENST00000520539 FAM19A2Q8N3H0 131 aa13.27□□□□□ -0.29
UBR5-207ENST00000520539 NHSQ6T4R5 1651 aa13.26□□□□□ -0.29
UBR5-207ENST00000520539 LTBP3Q9NS15 1303 aa13.26□□□□□ -0.29
UBR5-207ENST00000520539 OSTCQ9NRP0 149 aa13.26□□□□□ -0.29
UBR5-207ENST00000520539 MRPS18AQ9NVS2 196 aaKnown RBP13.26□□□□□ -0.29
UBR5-207ENST00000520539 RICTORQ6R327 1708 aa13.26□□□□□ -0.29
UBR5-207ENST00000520539 RLFQ13129 1914 aa13.26□□□□□ -0.29
UBR5-207ENST00000520539 PPP1R3EQ9H7J1 279 aa13.26□□□□□ -0.29
UBR5-207ENST00000520539 A0A1W2PR80 420 aa13.26□□□□□ -0.29
UBR5-207ENST00000520539 GAGE5Q13069 117 aa13.26□□□□□ -0.29
UBR5-207ENST00000520539 GAGE6Q13070 117 aa13.26□□□□□ -0.29
UBR5-207ENST00000520539 PRR13Q9NZ81 148 aa13.26□□□□□ -0.29
UBR5-207ENST00000520539 SONP18583 2426 aaKnown RBP13.26□□□□□ -0.29
UBR5-207ENST00000520539 IGKV3D-15A0A087WSY6 115 aa13.26□□□□□ -0.29
UBR5-207ENST00000520539 IGKV3-15P01624 115 aa13.26□□□□□ -0.29
UBR5-207ENST00000520539 SPANXB1Q9NS25 103 aaPredicted RBP13.26□□□□□ -0.29
UBR5-207ENST00000520539 NPIPB11E5RHQ5 1161 aa13.26□□□□□ -0.29
UBR5-207ENST00000520539 MYOD1P15172 320 aa13.26□□□□□ -0.29
UBR5-207ENST00000520539 H2BFSP57053 126 aa13.26□□□□□ -0.29
UBR5-207ENST00000520539 CDC42EP2O14613 210 aa13.25□□□□□ -0.29
UBR5-207ENST00000520539 SLC25A38Q96DW6 304 aa13.25□□□□□ -0.29
UBR5-207ENST00000520539 CXorf66Q5JRM2 361 aaPredicted RBP13.25□□□□□ -0.29
UBR5-207ENST00000520539 RBM3P98179 157 aaKnown RBP13.25□□□□□ -0.29
UBR5-207ENST00000520539 GATD1Q8NB37 220 aa13.25□□□□□ -0.29
UBR5-207ENST00000520539 ZNF205O95201 554 aa13.25□□□□□ -0.29
UBR5-207ENST00000520539 SELENOHQ8IZQ5 122 aaKnown RBP13.25□□□□□ -0.29
UBR5-207ENST00000520539 IL18BPO95998 194 aa13.25□□□□□ -0.29
UBR5-207ENST00000520539 WFDC3Q8IUB2 231 aa13.25□□□□□ -0.29
UBR5-207ENST00000520539 SLC50A1Q9BRV3 221 aa13.25□□□□□ -0.29
UBR5-207ENST00000520539 LRRC61Q9BV99 259 aa13.25□□□□□ -0.29
UBR5-207ENST00000520539 PDFQ9HBH1 243 aa13.25□□□□□ -0.29
UBR5-207ENST00000520539 RPUSD1Q9UJJ7 312 aaKnown RBP13.25□□□□□ -0.29
UBR5-207ENST00000520539 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.25□□□□□ -0.29
UBR5-207ENST00000520539 C8orf44Q96CB5 159 aa13.25□□□□□ -0.29
UBR5-207ENST00000520539 FZR1Q9UM11 496 aa13.25□□□□□ -0.29
UBR5-207ENST00000520539 PLXNB3Q9ULL4 1909 aa13.24□□□□□ -0.29
UBR5-207ENST00000520539 DXOO77932 396 aaKnown RBP13.24□□□□□ -0.29
UBR5-207ENST00000520539 APELAP0DMC3 54 aa13.24□□□□□ -0.29
UBR5-207ENST00000520539 VSTM2LQ96N03 204 aa13.24□□□□□ -0.29
UBR5-207ENST00000520539 VGLL1Q99990 258 aa13.24□□□□□ -0.29
UBR5-207ENST00000520539 NYNRINQ9P2P1 1898 aaKnown RBP13.24□□□□□ -0.29
UBR5-207ENST00000520539 K7ESM1 405 aa13.24□□□□□ -0.29
UBR5-207ENST00000520539 SMIM20Q8N5G0 67 aa13.24□□□□□ -0.29
UBR5-207ENST00000520539 DUX3Q96PT4 197 aa13.24□□□□□ -0.29
UBR5-207ENST00000520539 BCL6BQ8N143 479 aaPredicted RBP13.24□□□□□ -0.29
UBR5-207ENST00000520539 LPAL2Q16609 132 aa13.24□□□□□ -0.29
UBR5-207ENST00000520539 FGFRL1Q8N441 504 aa13.24□□□□□ -0.29
UBR5-207ENST00000520539 SSBP3Q9BWW4 388 aaPredicted RBP13.24□□□□□ -0.29
UBR5-207ENST00000520539 OTORQ9NRC9 128 aa13.24□□□□□ -0.29
UBR5-207ENST00000520539 CGB1A6NKQ9 187 aa13.24□□□□□ -0.29
UBR5-207ENST00000520539 FGF22Q9HCT0 170 aa13.24□□□□□ -0.29
UBR5-207ENST00000520539 TRGV11A0A075B6L2 103 aa13.24□□□□□ -0.29
UBR5-207ENST00000520539 NCR2O95944 276 aa13.24□□□□□ -0.29
UBR5-207ENST00000520539 GTF3AQ92664 365 aaKnown RBP13.23□□□□□ -0.29
UBR5-207ENST00000520539 ANAPC10Q9UM13 185 aa13.23□□□□□ -0.29
UBR5-207ENST00000520539 NBEAP1P0C6P0 100 aa13.23□□□□□ -0.29
UBR5-207ENST00000520539 EGR1P18146 543 aa13.23□□□□□ -0.29
UBR5-207ENST00000520539 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.23□□□□□ -0.295e-8■■■■□ 19.8
UBR5-207ENST00000520539 DUSP15Q9H1R2 295 aaPredicted RBP13.23□□□□□ -0.29
UBR5-207ENST00000520539 J3QW42 95 aa13.23□□□□□ -0.29
UBR5-207ENST00000520539 C9orf50Q5SZB4 431 aa13.23□□□□□ -0.29
UBR5-207ENST00000520539 SBF1O95248 1867 aa13.23□□□□□ -0.29
UBR5-207ENST00000520539 ZNRF1Q8ND25 227 aa13.23□□□□□ -0.29
UBR5-207ENST00000520539 CRYGNQ8WXF5 182 aa13.23□□□□□ -0.29
UBR5-207ENST00000520539 MYMXA0A1B0GTQ4 84 aa13.23□□□□□ -0.29
UBR5-207ENST00000520539 CD300EQ496F6 205 aaPredicted RBP13.23□□□□□ -0.29
UBR5-207ENST00000520539 SRFP11831 508 aa13.22□□□□□ -0.29
UBR5-207ENST00000520539 ATG4DQ86TL0 474 aaPredicted RBP13.22□□□□□ -0.29
UBR5-207ENST00000520539 FDCSPQ8NFU4 85 aa13.22□□□□□ -0.29
UBR5-207ENST00000520539 OR9G1Q8NH87 305 aa13.22□□□□□ -0.29
UBR5-207ENST00000520539 DENND4CQ5VZ89 1909 aa13.22□□□□□ -0.29
UBR5-207ENST00000520539 ACYP1P07311 99 aa13.22□□□□□ -0.29
UBR5-207ENST00000520539 TSPAN7P41732 249 aa13.22□□□□□ -0.29
UBR5-207ENST00000520539 ANKRD34AQ69YU3 496 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms