RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 SULT1C2O00338 296 aa7.04□□□□□ -1.28
CTNNA1-221ENST00000520339 PLA2G10O15496 165 aa7.04□□□□□ -1.28
CTNNA1-221ENST00000520339 OR9G9P0C7N8 305 aa7.04□□□□□ -1.28
CTNNA1-221ENST00000520339 APELAP0DMC3 54 aa7.04□□□□□ -1.28
CTNNA1-221ENST00000520339 PRSS3P35030 304 aa7.04□□□□□ -1.28
CTNNA1-221ENST00000520339 RFX2P48378 723 aa7.04□□□□□ -1.28
CTNNA1-221ENST00000520339 SSBP1Q04837 148 aaKnown RBP7.04□□□□□ -1.28
CTNNA1-221ENST00000520339 ARFRP1Q13795 201 aa7.04□□□□□ -1.28
CTNNA1-221ENST00000520339 KLF9Q13886 244 aaPredicted RBP7.04□□□□□ -1.28
CTNNA1-221ENST00000520339 ARL6IP1Q15041 203 aa7.04□□□□□ -1.28
CTNNA1-221ENST00000520339 TATDN3Q17R31 274 aa7.04□□□□□ -1.28
CTNNA1-221ENST00000520339 PXDC1Q5TGL8 231 aa7.04□□□□□ -1.28
CTNNA1-221ENST00000520339 NRARPQ7Z6K4 114 aa7.04□□□□□ -1.28
CTNNA1-221ENST00000520339 SGPP2Q8IWX5 399 aa7.04□□□□□ -1.28
CTNNA1-221ENST00000520339 OSR1Q8TAX0 266 aaPredicted RBP7.04□□□□□ -1.28
CTNNA1-221ENST00000520339 SRSF12Q8WXF0 261 aaKnown RBP7.04□□□□□ -1.28
CTNNA1-221ENST00000520339 COA4Q9NYJ1 87 aa7.04□□□□□ -1.28
CTNNA1-221ENST00000520339 TENM2Q9NT68 2774 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 DNAH1Q9P2D7 4330 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 TRBV9A0A0B4J1U6 114 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 FAM240BA0A1B0GVZ2 78 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 HMX3A6NHT5 357 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 WRBO00258 174 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 IGLV2-14P01704 120 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 CTXN2P0C2S0 81 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 SAA1P0DJI8 122 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 LYL1P12980 280 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 FAUP35544 74 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 TSPAN5P62079 268 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 RPL30P62888 115 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 RHOGP84095 191 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 TNXAQ16473 311 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 TTC9CQ8N5M4 171 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 ZNF645Q8N7E2 425 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 DEDD2Q8WXF8 326 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 SNAPC3Q92966 411 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 C8orf49Q96NF6 230 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 PHB2Q99623 299 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 ST6GALNAC5Q9BVH7 336 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 KRTAP4-8Q9BYQ9 185 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 ZNF430Q9H8G1 570 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 EDA2RQ9HAV5 297 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 TAS2R8Q9NYW2 309 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 OR2W1Q9Y3N9 320 aa7.03□□□□□ -1.28
CTNNA1-221ENST00000520339 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 IGKV1D-13A0A0B4J2D9 117 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 ANKRD20A5PA0PJZ0 165 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 IZUMO1RA6ND01 250 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 TMEM235A6NFC5 223 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 NAP1L6A6NFF2 107 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 FAM223BA6NKX1 122 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 BMPR1BO00238 502 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 FCGR3BO75015 233 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 ACTL6BO94805 426 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 OR2A4O95047 310 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 PRH1P02810 166 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 IGKV1-13P0DP09 117 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 PTHLHP12272 177 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 NFYAP23511 347 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 ATP5G2Q06055 141 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 CD300CQ08708 224 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 EIF4EBP1Q13541 118 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 HAGHQ16775 308 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 RPEL1Q2QD12 228 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 ZFP69Q49AA0 526 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 C10orf55Q5SWW7 151 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 PLET1Q6UQ28 207 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 ADAMTSL5Q6ZMM2 481 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 FAM223AQ8IWN6 122 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 MMD2Q8IY49 270 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 IL17DQ8TAD2 202 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 GPX8Q8TED1 209 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 SPIN2AQ99865 258 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 SPIN2BQ9BPZ2 258 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 COPZ2Q9P299 210 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 MTFP1Q9UDX5 166 aa7.02□□□□□ -1.29
CTNNA1-221ENST00000520339 STARD9Q9P2P6 4700 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 TEX22C9J3V5 150 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 MPPED1O15442 326 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 CREBL2O60519 120 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 CCNKO75909 580 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 SLC22A5O76082 557 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 BTCP35070 178 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 BRWD1-AS2P59051 145 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 TAS2R19P59542 299 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 EXOSC2Q13868 293 aaKnown RBP7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 LINC00322Q6ZN03 302 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 NECAP1Q8NC96 275 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 OR2K2Q8NGT1 345 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 OR6F1Q8NGZ6 308 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 NUDCD2Q8WVJ2 157 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 MARC2Q969Z3 335 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 C20orf173Q96LM9 149 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 IFT46Q9NQC8 304 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 PEMTQ9UBM1 199 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 KLK11Q9UBX7 282 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 DMRT1Q9Y5R6 373 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 TNCP24821 2201 aa7.01□□□□□ -1.29
CTNNA1-221ENST00000520339 A0A1B0GW64 132 aa7□□□□□ -1.29
CTNNA1-221ENST00000520339 MEIS3P1A6NDR6 274 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms