RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 GMDSO60547 372 aa-3.07□□□□□ -2.9
RNU6-542P-201ENST00000516405 TNNI1P19237 187 aa-3.07□□□□□ -2.9
RNU6-542P-201ENST00000516405 HLA-DPA1P20036 260 aa-3.07□□□□□ -2.9
RNU6-542P-201ENST00000516405 GADD45AP24522 165 aa-3.07□□□□□ -2.9
RNU6-542P-201ENST00000516405 GMFBP60983 142 aa-3.07□□□□□ -2.9
RNU6-542P-201ENST00000516405 RPL30P62888 115 aaKnown RBP-3.07□□□□□ -2.9
RNU6-542P-201ENST00000516405 PRDX1Q06830 199 aaKnown RBP-3.07□□□□□ -2.9
RNU6-542P-201ENST00000516405 Q6ZS49 121 aa-3.07□□□□□ -2.9
RNU6-542P-201ENST00000516405 TMEM251Q8N6I4 163 aa-3.07□□□□□ -2.9
RNU6-542P-201ENST00000516405 CRACR2AQ9BSW2 395 aa-3.07□□□□□ -2.9
RNU6-542P-201ENST00000516405 NAA50Q9GZZ1 169 aaKnown RBP-3.07□□□□□ -2.9
RNU6-542P-201ENST00000516405 ZMAT5Q9UDW3 170 aaKnown RBP-3.07□□□□□ -2.9
RNU6-542P-201ENST00000516405 LINC00527Q9UJ94 153 aa-3.07□□□□□ -2.9
RNU6-542P-201ENST00000516405 CLEC4AQ9UMR7 237 aa-3.07□□□□□ -2.9
RNU6-542P-201ENST00000516405 ECM29Q5VYK3 1845 aa-3.07□□□□□ -2.9
RNU6-542P-201ENST00000516405 A0A0A6YYH2 397 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 TRAV8-2A0A0B4J237 113 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 A6NJ64 397 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 A6NN06 94 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 I3L4J1 428 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 PRPSAP2O60256 369 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 YEATS4O95619 227 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 IFNW1P05000 195 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 ARF4P18085 180 aaPredicted RBP-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 PDE6GP18545 87 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 CPN2P22792 545 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 HSPA9P38646 679 aaKnown RBP-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 FXYD3Q14802 87 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 RHEBQ15382 184 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 SYPL2Q5VXT5 272 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 RNASEKQ6P5S7 137 aaKnown RBP-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 CASC1Q6TDU7 716 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 TMEM107Q6UX40 140 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 RASSF6Q6ZTQ3 369 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 C5orf56Q8N8D9 126 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 OR52E5Q8NH55 327 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 DTD1Q8TEA8 209 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 ANKRD7Q92527 254 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 TP53RKQ96S44 253 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 ANP32EQ9BTT0 268 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 IFNKQ9P0W0 207 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 CFL2Q9Y281 166 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 TP53TG1Q9Y2A0 90 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 TRANK1O15050 2925 aa-3.08□□□□□ -2.9
RNU6-542P-201ENST00000516405 LRBAP50851 2863 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 KIAA1549LQ6ZVL6 1849 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 A0A0D9SFI3 127 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 NBDYA0A0U1RRE5 68 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 GGT3PA6NGU5 568 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 PCP4L1A6NKN8 68 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 SEC14L6B5MCN3 397 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 H3BN98 237 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 ZNF701M0R085 212 aaPredicted RBP-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 HSP90AA1P07900 732 aaKnown RBP-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 MT1HL1P0DM35 61 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 DNASE1L1P49184 302 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 HERVK_113P63121 156 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 CENPWQ5EE01 88 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 LRRC6Q86X45 466 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 OR56B2PQ8NGI1 322 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 Q8TAT8 98 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 CANT1Q8WVQ1 401 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 ACY3Q96HD9 319 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 BBS2Q9BXC9 721 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 TMEM14BQ9NUH8 114 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 ADA2Q9NZK5 511 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 DNAH8Q96JB1 4490 aa-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 XIRP1Q702N8 1843 aaKnown RBP-3.09□□□□□ -2.9
RNU6-542P-201ENST00000516405 GVQW2A0A096LPI5 108 aaPredicted RBP-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 F2Z2F3 143 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 M0R381 172 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 PSMD12O00232 456 aaPredicted RBP-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 MRASO14807 208 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 SULT1C4O75897 302 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 COX6A1P12074 109 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 MT1XP80297 61 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 HIKESHIQ53FT3 197 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 Q5XG85 94 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 SSX8Q7RTT4 187 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 SPC24Q8NBT2 197 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 LINC00301Q8NCQ3 95 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 OR51Q1Q8NH59 317 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 TMEM254Q8TBM7 123 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 C12orf43Q96C57 262 aaKnown RBP-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 ZNF714Q96N38 554 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 OPALINQ96PE5 141 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 BPESC1Q9GZL8 116 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 OR51E2Q9H255 320 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 TMEM216Q9P0N5 145 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 CLEC2DQ9UHP7 191 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 SAR1BQ9Y6B6 198 aa-3.1□□□□□ -2.91
RNU6-542P-201ENST00000516405 MYO9AB2RTY4 2548 aa-3.11□□□□□ -2.91
RNU6-542P-201ENST00000516405 INSRP06213 1382 aa-3.11□□□□□ -2.91
RNU6-542P-201ENST00000516405 FAM240BA0A1B0GVZ2 78 aa-3.11□□□□□ -2.91
RNU6-542P-201ENST00000516405 NCF1BA6NI72 391 aaPredicted RBP-3.11□□□□□ -2.91
RNU6-542P-201ENST00000516405 MCRIP1C9JLW8 97 aa-3.11□□□□□ -2.91
RNU6-542P-201ENST00000516405 TPD52L2O43399 206 aaKnown RBP-3.11□□□□□ -2.91
RNU6-542P-201ENST00000516405 DHFRP00374 187 aa-3.11□□□□□ -2.91
RNU6-542P-201ENST00000516405 HLA-DQB2P05538 268 aa-3.11□□□□□ -2.91
RNU6-542P-201ENST00000516405 OR8G3PP0DMU2 310 aa-3.11□□□□□ -2.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms