RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 KAAG1Q9UBP8 84 aa6.68□□□□□ -1.34
SFXN1-211ENST00000515736 PLCE1Q9P212 2302 aa6.68□□□□□ -1.34
SFXN1-211ENST00000515736 PRR14LQ5THK1 2151 aa6.68□□□□□ -1.34
SFXN1-211ENST00000515736 RBFOX3A6NFN3 312 aa6.67□□□□□ -1.34
SFXN1-211ENST00000515736 RAMP3O60896 148 aa6.67□□□□□ -1.34
SFXN1-211ENST00000515736 ARG1P05089 322 aa6.67□□□□□ -1.34
SFXN1-211ENST00000515736 METTL15P1P0C7V9 234 aa6.67□□□□□ -1.34
SFXN1-211ENST00000515736 ZNF816Q0VGE8 651 aaPredicted RBP6.67□□□□□ -1.34
SFXN1-211ENST00000515736 C17orf58Q2M2W7 97 aa6.67□□□□□ -1.34
SFXN1-211ENST00000515736 TMEM249Q2WGJ8 235 aa6.67□□□□□ -1.34
SFXN1-211ENST00000515736 TMEM41BQ5BJD5 291 aa6.67□□□□□ -1.34
SFXN1-211ENST00000515736 ZNF506Q5JVG8 444 aa6.67□□□□□ -1.34
SFXN1-211ENST00000515736 SPANXN5Q5MJ07 72 aa6.67□□□□□ -1.34
SFXN1-211ENST00000515736 LINC00311Q8N616 119 aa6.67□□□□□ -1.34
SFXN1-211ENST00000515736 BOLLQ8N9W6 283 aaKnown RBP6.67□□□□□ -1.34
SFXN1-211ENST00000515736 ZNRF1Q8ND25 227 aa6.67□□□□□ -1.34
SFXN1-211ENST00000515736 ZNF439Q8NDP4 499 aa6.67□□□□□ -1.34
SFXN1-211ENST00000515736 OR4A16Q8NH70 328 aa6.67□□□□□ -1.34
SFXN1-211ENST00000515736 TAF15Q92804 592 aaKnown RBP eCLIP6.67□□□□□ -1.34
SFXN1-211ENST00000515736 RNASE6Q93091 150 aaKnown RBP6.67□□□□□ -1.34
SFXN1-211ENST00000515736 SCRT1Q9BWW7 348 aa6.67□□□□□ -1.34
SFXN1-211ENST00000515736 SMCO4Q9NRQ5 59 aa6.67□□□□□ -1.34
SFXN1-211ENST00000515736 RPUSD1Q9UJJ7 312 aaKnown RBP6.67□□□□□ -1.34
SFXN1-211ENST00000515736 ZNF257Q9Y2Q1 563 aa6.67□□□□□ -1.34
SFXN1-211ENST00000515736 ACANP16112 2415 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 PPIAL4EA0A075B759 164 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 IGHV3OR15-7A0A075B7D8 119 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 CEBPZOSA8MTT3 80 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 PPIAL4DF5H284 164 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 TMEM178BH3BS89 294 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 H7C2Y5 167 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 M0R1X1 148 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 NDUFB3O43676 98 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 FCGR3BO75015 233 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 RBMXL2O75526 392 aaKnown RBP6.66□□□□□ -1.34
SFXN1-211ENST00000515736 RBP4P02753 201 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 PPIAL4FP0DN26 164 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 IAPPP10997 89 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 PPT1P50897 306 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 BRWD1-AS2P59051 145 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 OR2B8PP59922 312 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 RAB11AP62491 216 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 FLI1Q01543 452 aaPredicted RBP6.66□□□□□ -1.34
SFXN1-211ENST00000515736 AKR1C1Q04828 323 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 TMEM267Q0VDI3 215 aaPredicted RBP6.66□□□□□ -1.34
SFXN1-211ENST00000515736 GUCA2BQ16661 112 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 RTL8BQ17RB0 113 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 LRRC10Q5BKY1 277 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 XP32Q5T750 250 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 PRAMEF5Q5TYX0 476 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 SPSB3Q6PJ21 355 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 BTNL3Q6UXE8 466 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 HEPN1Q6WQI6 88 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 SLC25A48Q6ZT89 311 aaKnown RBP6.66□□□□□ -1.34
SFXN1-211ENST00000515736 TPRX1Q8N7U7 411 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 C15orf54Q8N8G6 183 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 RFESDQ8TAC1 157 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 UBALD1Q8TB05 177 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 ZNF596Q8TC21 504 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 TNFRSF14Q92956 283 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 GRAMD2BQ96HH9 432 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 FKBP11Q9NYL4 201 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 FOXA2Q9Y261 457 aaPredicted RBP6.66□□□□□ -1.34
SFXN1-211ENST00000515736 PPIAL4AQ9Y536 164 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 CADP27708 2225 aa6.66□□□□□ -1.34
SFXN1-211ENST00000515736 ANKHD1Q8IWZ3 2542 aaKnown RBP6.65□□□□□ -1.34
SFXN1-211ENST00000515736 SAA2-SAA4A0A096LPE2 208 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 IGHV3-43A0A0B4J1X8 118 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 LOC105371267A0A1B0GV96 52 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 C15orf61A6NNL5 157 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 PMS2P5A8MQ11 134 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 B4DEV8 164 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 SHISA9B4DS77 424 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 H3BP45 60 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 AGPAT2O15120 278 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 CYB5R3P00387 301 aaPredicted RBP6.65□□□□□ -1.34
SFXN1-211ENST00000515736 SAA2P0DJI9 122 aaPredicted RBP6.65□□□□□ -1.34
SFXN1-211ENST00000515736 IGHV3-43DP0DP04 118 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 MDKP21741 143 aaPredicted RBP6.65□□□□□ -1.34
SFXN1-211ENST00000515736 MRPS11P82912 194 aaKnown RBP6.65□□□□□ -1.34
SFXN1-211ENST00000515736 PNRC1Q12796 327 aaPredicted RBP6.65□□□□□ -1.34
SFXN1-211ENST00000515736 SOHLH1Q5JUK2 328 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 NCR3LG1Q68D85 454 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 ATRAIDQ6UW56 229 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 RBMS3Q6XE24 437 aaKnown RBP6.65□□□□□ -1.34
SFXN1-211ENST00000515736 ZNF709Q8N972 641 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.65□□□□□ -1.34
SFXN1-211ENST00000515736 OR4A5Q8NH83 315 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 VSTM2AQ8TAG5 236 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 TMEM186Q96B77 213 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 ZNF714Q96N38 554 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 WFIKKN1Q96NZ8 548 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 OR4C12Q96R67 309 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 DYNLRB1Q9NP97 96 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 TMEM106BQ9NUM4 274 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 PRNDQ9UKY0 176 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 PRELID1Q9Y255 219 aa6.65□□□□□ -1.34
SFXN1-211ENST00000515736 FLNAP21333 2647 aaKnown RBP6.64□□□□□ -1.35
SFXN1-211ENST00000515736 A0A087WWC5 75 aa6.64□□□□□ -1.35
SFXN1-211ENST00000515736 CTXND1A0A1B0GTU2 59 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms