RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 FAM159AQ6UWV7 190 aa11.24□□□□□ -0.61
TCOF1-214ENST00000515035 MIR17HGQ75NE6 70 aa11.24□□□□□ -0.61
TCOF1-214ENST00000515035 TDRD15B5MCY1 1934 aaKnown RBP11.24□□□□□ -0.61
TCOF1-214ENST00000515035 DOCK3Q8IZD9 2030 aa11.24□□□□□ -0.61
TCOF1-214ENST00000515035 A0A1W2PR77 199 aa11.24□□□□□ -0.61
TCOF1-214ENST00000515035 Q6AWC8 147 aa11.24□□□□□ -0.61
TCOF1-214ENST00000515035 FADS6Q8N9I5 356 aa11.24□□□□□ -0.61
TCOF1-214ENST00000515035 SSBP4Q9BWG4 385 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-214ENST00000515035 C17orf98A8MV24 154 aa11.23□□□□□ -0.61
TCOF1-214ENST00000515035 C12orf77C9JDV5 145 aa11.23□□□□□ -0.61
TCOF1-214ENST00000515035 ORAOV1Q8WV07 137 aa11.23□□□□□ -0.61
TCOF1-214ENST00000515035 IGHV1-45A0A0A0MS14 117 aa11.23□□□□□ -0.61
TCOF1-214ENST00000515035 NKX2-8O15522 239 aa11.23□□□□□ -0.61
TCOF1-214ENST00000515035 NPPCP23582 126 aa11.23□□□□□ -0.61
TCOF1-214ENST00000515035 CCL20P78556 96 aa11.23□□□□□ -0.61
TCOF1-214ENST00000515035 TMEM30BQ3MIR4 351 aa11.23□□□□□ -0.61
TCOF1-214ENST00000515035 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-214ENST00000515035 NDUFS6O75380 124 aaKnown RBP11.23□□□□□ -0.61
TCOF1-214ENST00000515035 TNFSF13O75888 250 aa11.23□□□□□ -0.61
TCOF1-214ENST00000515035 NDUFA3O95167 84 aa11.23□□□□□ -0.61
TCOF1-214ENST00000515035 OR52E5Q8NH55 327 aa11.23□□□□□ -0.61
TCOF1-214ENST00000515035 OR5P3Q8WZ94 311 aa11.23□□□□□ -0.61
TCOF1-214ENST00000515035 SPAG8Q99932 426 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-214ENST00000515035 CKS1BP61024 79 aa11.22□□□□□ -0.61
TCOF1-214ENST00000515035 RSPO4Q2I0M5 234 aaPredicted RBP11.22□□□□□ -0.61
TCOF1-214ENST00000515035 TIMM23BQ5SRD1 257 aa11.22□□□□□ -0.61
TCOF1-214ENST00000515035 CIARTQ8N365 385 aaPredicted RBP11.22□□□□□ -0.61
TCOF1-214ENST00000515035 TRBV24-1A0A075B6N3 115 aa11.22□□□□□ -0.61
TCOF1-214ENST00000515035 FMC1Q96HJ9 113 aa11.22□□□□□ -0.61
TCOF1-214ENST00000515035 IGHV3OR16-13A0A075B7E8 117 aa11.22□□□□□ -0.61
TCOF1-214ENST00000515035 IGHV3-74A0A0B4J1X5 117 aa11.22□□□□□ -0.61
TCOF1-214ENST00000515035 NDUFA2O43678 99 aa11.22□□□□□ -0.61
TCOF1-214ENST00000515035 CD5P06127 495 aa11.22□□□□□ -0.61
TCOF1-214ENST00000515035 CXCL1P09341 107 aa11.22□□□□□ -0.61
TCOF1-214ENST00000515035 LTBRP36941 435 aa11.22□□□□□ -0.61
TCOF1-214ENST00000515035 TEX45Q8NA69 505 aa11.22□□□□□ -0.61
TCOF1-214ENST00000515035 OR5AN1Q8NGI8 311 aa11.22□□□□□ -0.61
TCOF1-214ENST00000515035 NPIPB11E5RHQ5 1161 aa11.22□□□□□ -0.61
TCOF1-214ENST00000515035 NAPSAO96009 420 aa11.22□□□□□ -0.61
TCOF1-214ENST00000515035 TMEM171Q8WVE6 324 aa11.22□□□□□ -0.61
TCOF1-214ENST00000515035 SRXN1Q9BYN0 137 aa11.22□□□□□ -0.61
TCOF1-214ENST00000515035 C9JCJ5 164 aa11.22□□□□□ -0.61
TCOF1-214ENST00000515035 TSPOP30536 169 aa11.22□□□□□ -0.61
TCOF1-214ENST00000515035 GATA2P23769 480 aaPredicted RBP11.21□□□□□ -0.61
TCOF1-214ENST00000515035 SHISA5Q8N114 240 aa11.21□□□□□ -0.61
TCOF1-214ENST00000515035 PARP14Q460N5 1801 aa11.21□□□□□ -0.61
TCOF1-214ENST00000515035 TMEM262E9PQX1 116 aa11.21□□□□□ -0.61
TCOF1-214ENST00000515035 ZNF585BQ52M93 769 aa11.21□□□□□ -0.61
TCOF1-214ENST00000515035 TMEM74BQ9NUR3 256 aa11.21□□□□□ -0.61
TCOF1-214ENST00000515035 AHRRA9YTQ3 701 aa11.21□□□□□ -0.62
TCOF1-214ENST00000515035 SYNGR3O43761 229 aa11.21□□□□□ -0.62
TCOF1-214ENST00000515035 SEC11AP67812 179 aa11.21□□□□□ -0.62
TCOF1-214ENST00000515035 SCARF2Q96GP6 870 aaPredicted RBP11.21□□□□□ -0.62
TCOF1-214ENST00000515035 OTOFQ9HC10 1997 aa11.21□□□□□ -0.62
TCOF1-214ENST00000515035 PRR33A8MZF0 331 aa11.21□□□□□ -0.62
TCOF1-214ENST00000515035 FAM106AQ4KMX7 169 aa11.21□□□□□ -0.62
TCOF1-214ENST00000515035 FER1L6-AS1Q8NA97 138 aa11.21□□□□□ -0.62
TCOF1-214ENST00000515035 ZNRF1Q8ND25 227 aa11.21□□□□□ -0.62
TCOF1-214ENST00000515035 RAX2Q96IS3 184 aa11.21□□□□□ -0.62
TCOF1-214ENST00000515035 C1QL4Q86Z23 238 aa11.2□□□□□ -0.62
TCOF1-214ENST00000515035 OSR1Q8TAX0 266 aaPredicted RBP11.2□□□□□ -0.62
TCOF1-214ENST00000515035 OSTCQ9NRP0 149 aa11.2□□□□□ -0.62
TCOF1-214ENST00000515035 CEACAM4O75871 244 aa11.2□□□□□ -0.62
TCOF1-214ENST00000515035 CTSBP07858 339 aa11.2□□□□□ -0.62
TCOF1-214ENST00000515035 LEPP41159 167 aa11.2□□□□□ -0.62
TCOF1-214ENST00000515035 TMEM54Q969K7 222 aa11.2□□□□□ -0.62
TCOF1-214ENST00000515035 IGKV1D-43A0A0B4J1Z2 117 aa11.2□□□□□ -0.62
TCOF1-214ENST00000515035 PPIAL4CA0A0B4J2A2 164 aa11.2□□□□□ -0.62
TCOF1-214ENST00000515035 PPIAL4GP0DN37 164 aa11.2□□□□□ -0.62
TCOF1-214ENST00000515035 PYY3Q5JQD4 70 aa11.2□□□□□ -0.62
TCOF1-214ENST00000515035 ZNF479Q96JC4 524 aa11.2□□□□□ -0.62
TCOF1-214ENST00000515035 C18orf12Q96KH6 178 aa11.2□□□□□ -0.62
TCOF1-214ENST00000515035 PIKFYVEQ9Y2I7 2098 aa11.2□□□□□ -0.62
TCOF1-214ENST00000515035 IGFBP3P17936 291 aaPredicted RBP11.2□□□□□ -0.62
TCOF1-214ENST00000515035 ASIPP42127 132 aa11.2□□□□□ -0.62
TCOF1-214ENST00000515035 C1orf194Q5T5A4 169 aa11.2□□□□□ -0.62
TCOF1-214ENST00000515035 VKORC1Q9BQB6 163 aa11.2□□□□□ -0.62
TCOF1-214ENST00000515035 TMEM242Q9NWH2 141 aa11.2□□□□□ -0.62
TCOF1-214ENST00000515035 NPFFO15130 113 aa11.19□□□□□ -0.62
TCOF1-214ENST00000515035 HBDP02042 147 aa11.19□□□□□ -0.62
TCOF1-214ENST00000515035 IGLV3-21P80748 117 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-214ENST00000515035 OR10J3Q5JRS4 329 aa11.19□□□□□ -0.62
TCOF1-214ENST00000515035 OCC1Q8TAD7 63 aa11.19□□□□□ -0.62
TCOF1-214ENST00000515035 ST20Q9HBF5 79 aa11.19□□□□□ -0.62
TCOF1-214ENST00000515035 SCN2AQ99250 2005 aa11.19□□□□□ -0.62
TCOF1-214ENST00000515035 CTSSP25774 331 aa11.19□□□□□ -0.62
TCOF1-214ENST00000515035 CLEC7AQ9BXN2 247 aa11.19□□□□□ -0.62
TCOF1-214ENST00000515035 GNB1LQ9BYB4 327 aa11.19□□□□□ -0.62
TCOF1-214ENST00000515035 HS3ST3B1Q9Y662 390 aa11.19□□□□□ -0.62
TCOF1-214ENST00000515035 CACNG7P62955 275 aa11.19□□□□□ -0.62
TCOF1-214ENST00000515035 ATP5G2Q06055 141 aa11.19□□□□□ -0.62
TCOF1-214ENST00000515035 H7C1H1 209 aa11.19□□□□□ -0.62
TCOF1-214ENST00000515035 TEX38Q6PEX7 206 aa11.19□□□□□ -0.62
TCOF1-214ENST00000515035 IGKV3-20P01619 116 aa11.18□□□□□ -0.62
TCOF1-214ENST00000515035 Q9H3A6 140 aa11.18□□□□□ -0.62
TCOF1-214ENST00000515035 HSD52Q0P140 79 aa11.18□□□□□ -0.62
TCOF1-214ENST00000515035 CACNG8Q8WXS5 425 aa11.18□□□□□ -0.62
TCOF1-214ENST00000515035 FAM181BA6NEQ2 426 aa11.18□□□□□ -0.62
TCOF1-214ENST00000515035 IFNL4K9M1U5 179 aa11.18□□□□□ -0.62
TCOF1-214ENST00000515035 COX6B1P14854 86 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms