RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 TGOLN2O43493 480 aa18.5■□□□□ 0.55
SNF8-213ENST00000514929 CD81P60033 236 aa18.5■□□□□ 0.55
SNF8-213ENST00000514929 CCDC71LQ8N9Z2 235 aa18.5■□□□□ 0.55
SNF8-213ENST00000514929 SMIM4Q8WVI0 70 aa18.5■□□□□ 0.55
SNF8-213ENST00000514929 TP53RKQ96S44 253 aa18.5■□□□□ 0.55
SNF8-213ENST00000514929 C3orf85A0A1B0GTC6 90 aa18.49■□□□□ 0.55
SNF8-213ENST00000514929 OR2T8A6NH00 312 aa18.49■□□□□ 0.55
SNF8-213ENST00000514929 ZNF785A8K8V0 405 aa18.49■□□□□ 0.55
SNF8-213ENST00000514929 MEF2DQ14814 521 aa18.49■□□□□ 0.55
SNF8-213ENST00000514929 UNQ9165/PRO28630Q6UXU0 137 aa18.49■□□□□ 0.55
SNF8-213ENST00000514929 UXS1Q8NBZ7 420 aa18.49■□□□□ 0.55
SNF8-213ENST00000514929 OR13C8Q8NGS7 320 aa18.49■□□□□ 0.55
SNF8-213ENST00000514929 MARCH1Q8TCQ1 289 aa18.49■□□□□ 0.55
SNF8-213ENST00000514929 NEURL2Q9BR09 285 aa18.49■□□□□ 0.55
SNF8-213ENST00000514929 C6orf62Q9GZU0 229 aaPredicted RBP18.49■□□□□ 0.55
SNF8-213ENST00000514929 C21orf62Q9NYP8 219 aa18.49■□□□□ 0.55
SNF8-213ENST00000514929 RABL2AQ9UBK7 228 aaPredicted RBP18.49■□□□□ 0.55
SNF8-213ENST00000514929 RABL2BQ9UNT1 228 aa18.49■□□□□ 0.55
SNF8-213ENST00000514929 SELENOKQ9Y6D0 94 aa18.49■□□□□ 0.55
SNF8-213ENST00000514929 AKR1C2P52895 323 aa18.48■□□□□ 0.55
SNF8-213ENST00000514929 HSPE1P61604 102 aaKnown RBP18.48■□□□□ 0.55
SNF8-213ENST00000514929 TM4SF20Q53R12 229 aa18.48■□□□□ 0.55
SNF8-213ENST00000514929 FAAP20Q6NZ36 180 aa18.48■□□□□ 0.55
SNF8-213ENST00000514929 OR1P1Q8NH06 330 aa18.48■□□□□ 0.55
SNF8-213ENST00000514929 SCARB1Q8WTV0 552 aa18.48■□□□□ 0.55
SNF8-213ENST00000514929 WDR89Q96FK6 387 aaPredicted RBP18.48■□□□□ 0.55
SNF8-213ENST00000514929 BSCL2Q96G97 398 aaPredicted RBP18.48■□□□□ 0.55
SNF8-213ENST00000514929 TM2D3Q9BRN9 247 aa18.48■□□□□ 0.55
SNF8-213ENST00000514929 PLEKHA3Q9HB20 300 aa18.48■□□□□ 0.55
SNF8-213ENST00000514929 UFC1Q9Y3C8 167 aa18.48■□□□□ 0.55
SNF8-213ENST00000514929 ATG12O94817 140 aa18.47■□□□□ 0.55
SNF8-213ENST00000514929 PRCDQ00LT1 54 aa18.47■□□□□ 0.55
SNF8-213ENST00000514929 IZUMO4Q1ZYL8 232 aa18.47■□□□□ 0.55
SNF8-213ENST00000514929 TRIM16LQ309B1 348 aa18.47■□□□□ 0.55
SNF8-213ENST00000514929 ZNF57Q68EA5 555 aaPredicted RBP18.47■□□□□ 0.55
SNF8-213ENST00000514929 UBAC2Q8NBM4 344 aa18.47■□□□□ 0.55
SNF8-213ENST00000514929 MLXQ9UH92 298 aa18.47■□□□□ 0.55
SNF8-213ENST00000514929 HUWE1Q7Z6Z7 4374 aaKnown RBP18.47■□□□□ 0.55
SNF8-213ENST00000514929 STAB2Q8WWQ8 2551 aa18.46■□□□□ 0.55
SNF8-213ENST00000514929 DISC1C4P0D8 188 aa18.46■□□□□ 0.55
SNF8-213ENST00000514929 H3BMQ9 156 aa18.46■□□□□ 0.55
SNF8-213ENST00000514929 K7EIM0 57 aa18.46■□□□□ 0.55
SNF8-213ENST00000514929 CTDSPLO15194 276 aa18.46■□□□□ 0.55
SNF8-213ENST00000514929 IGKV1-5P01602 117 aa18.46■□□□□ 0.55
SNF8-213ENST00000514929 CTSDP07339 412 aaPredicted RBP18.46■□□□□ 0.55
SNF8-213ENST00000514929 CD7P09564 240 aa18.46■□□□□ 0.55
SNF8-213ENST00000514929 ELLP55199 621 aaPredicted RBP18.46■□□□□ 0.55
SNF8-213ENST00000514929 SP6Q3SY56 376 aa18.46■□□□□ 0.55
SNF8-213ENST00000514929 Q56UQ5 140 aa18.46■□□□□ 0.55
SNF8-213ENST00000514929 SPSB3Q6PJ21 355 aa18.46■□□□□ 0.55
SNF8-213ENST00000514929 OR2C3Q8N628 320 aa18.46■□□□□ 0.55
SNF8-213ENST00000514929 MARC2Q969Z3 335 aa18.46■□□□□ 0.55
SNF8-213ENST00000514929 ISOC1Q96CN7 298 aa18.46■□□□□ 0.55
SNF8-213ENST00000514929 ATP6V0BQ99437 205 aa18.46■□□□□ 0.55
SNF8-213ENST00000514929 ZNF436Q9C0F3 470 aaPredicted RBP18.46■□□□□ 0.55
SNF8-213ENST00000514929 C14orf166Q9Y224 244 aaKnown RBP18.46■□□□□ 0.55
SNF8-213ENST00000514929 AKAIN1P0CW23 69 aa18.45■□□□□ 0.54
SNF8-213ENST00000514929 ERHP84090 104 aaKnown RBP18.45■□□□□ 0.54
SNF8-213ENST00000514929 BTNL8Q6UX41 500 aa18.45■□□□□ 0.54
SNF8-213ENST00000514929 TMEM61Q8N0U2 210 aa18.45■□□□□ 0.54
SNF8-213ENST00000514929 MISP3Q96FF7 219 aa18.45■□□□□ 0.54
SNF8-213ENST00000514929 SLIRPQ9GZT3 109 aaKnown RBP18.45■□□□□ 0.54
SNF8-213ENST00000514929 MRPL27Q9P0M9 148 aaKnown RBP18.45■□□□□ 0.54
SNF8-213ENST00000514929 HAGHQ16775 308 aa18.44■□□□□ 0.54
SNF8-213ENST00000514929 RNASE11Q8TAA1 199 aaKnown RBP18.44■□□□□ 0.54
SNF8-213ENST00000514929 TMEM190Q8WZ59 177 aa18.44■□□□□ 0.54
SNF8-213ENST00000514929 B3GALNT1O75752 331 aa18.43■□□□□ 0.54
SNF8-213ENST00000514929 UCP1P25874 307 aa18.43■□□□□ 0.54
SNF8-213ENST00000514929 SPINK9Q5DT21 86 aa18.43■□□□□ 0.54
SNF8-213ENST00000514929 SLC16A13Q7RTY0 426 aa18.43■□□□□ 0.54
SNF8-213ENST00000514929 ZNF114Q8NC26 417 aa18.43■□□□□ 0.54
SNF8-213ENST00000514929 OR4C16Q8NGL9 310 aa18.43■□□□□ 0.54
SNF8-213ENST00000514929 RRNAD1Q96FB5 475 aaKnown RBP18.43■□□□□ 0.54
SNF8-213ENST00000514929 SPATA25Q9BR10 227 aa18.43■□□□□ 0.54
SNF8-213ENST00000514929 CHRDL1Q9BU40 450 aa18.43■□□□□ 0.54
SNF8-213ENST00000514929 PDCD10Q9BUL8 212 aa18.43■□□□□ 0.54
SNF8-213ENST00000514929 GAR1Q9NY12 217 aaKnown RBP18.43■□□□□ 0.54
SNF8-213ENST00000514929 RSL24D1Q9UHA3 163 aaKnown RBP18.43■□□□□ 0.54
SNF8-213ENST00000514929 OR11H12B2RN74 326 aa18.42■□□□□ 0.54
SNF8-213ENST00000514929 F8W735 103 aaPredicted RBP18.42■□□□□ 0.54
SNF8-213ENST00000514929 SCAF4O95104 1147 aaKnown RBP18.42■□□□□ 0.54
SNF8-213ENST00000514929 IFNA17P01571 189 aa18.42■□□□□ 0.54
SNF8-213ENST00000514929 P0C879 139 aa18.42■□□□□ 0.54
SNF8-213ENST00000514929 C8orf88P0DMB2 117 aa18.42■□□□□ 0.54
SNF8-213ENST00000514929 SURF2Q15527 256 aaPredicted RBP18.42■□□□□ 0.54
SNF8-213ENST00000514929 DEFB125Q8N687 156 aa18.42■□□□□ 0.54
SNF8-213ENST00000514929 SLC35G3Q8N808 338 aa18.42■□□□□ 0.54
SNF8-213ENST00000514929 MCFD2Q8NI22 146 aa18.42■□□□□ 0.54
SNF8-213ENST00000514929 A0A0B4J293 547 aa18.41■□□□□ 0.54
SNF8-213ENST00000514929 TEX13DA0A0J9YY54 714 aaPredicted RBP18.41■□□□□ 0.54
SNF8-213ENST00000514929 NDUFA4O00483 81 aa18.41■□□□□ 0.54
SNF8-213ENST00000514929 ST8SIA3O43173 380 aa18.41■□□□□ 0.54
SNF8-213ENST00000514929 MFAP4P55083 255 aa18.41■□□□□ 0.54
SNF8-213ENST00000514929 RBPMS2Q6ZRY4 209 aaKnown RBP18.41■□□□□ 0.54
SNF8-213ENST00000514929 OR52B4Q8NGK2 314 aa18.41■□□□□ 0.54
SNF8-213ENST00000514929 PINX1Q96BK5 328 aaKnown RBP18.41■□□□□ 0.54
SNF8-213ENST00000514929 PRRT1Q99946 306 aa18.41■□□□□ 0.54
SNF8-213ENST00000514929 RTBDNQ9BSG5 229 aaPredicted RBP18.41■□□□□ 0.54
SNF8-213ENST00000514929 C20orf24Q9BUV8 137 aa18.41■□□□□ 0.54
SNF8-213ENST00000514929 WFDC10AQ9H1F0 79 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms