RNA–Protein interactions for RNA: ENST00000514694.5

MATR3-239, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-239ENST00000514694 FAM219AQ8IW50 185 aa11.89□□□□□ -0.51
MATR3-239ENST00000514694 LGI3Q8N145 548 aa11.89□□□□□ -0.51
MATR3-239ENST00000514694 NECAP1Q8NC96 275 aa11.89□□□□□ -0.51
MATR3-239ENST00000514694 SHPKQ9UHJ6 478 aa11.89□□□□□ -0.51
MATR3-239ENST00000514694 ANKRD34BA5PLL1 514 aa11.88□□□□□ -0.51
MATR3-239ENST00000514694 FAM223BA6NKX1 122 aa11.88□□□□□ -0.51
MATR3-239ENST00000514694 NXPH3O95157 252 aa11.88□□□□□ -0.51
MATR3-239ENST00000514694 OR4E1P0C645 316 aa11.88□□□□□ -0.51
MATR3-239ENST00000514694 RAB25P57735 213 aa11.88□□□□□ -0.51
MATR3-239ENST00000514694 UBE2MP61081 183 aaKnown RBP11.88□□□□□ -0.51
MATR3-239ENST00000514694 THOC7Q6I9Y2 204 aaKnown RBP11.88□□□□□ -0.51
MATR3-239ENST00000514694 ZNF343Q6P1L6 599 aa11.88□□□□□ -0.51
MATR3-239ENST00000514694 FAM223AQ8IWN6 122 aa11.88□□□□□ -0.51
MATR3-239ENST00000514694 LRTM2Q8N967 370 aa11.88□□□□□ -0.51
MATR3-239ENST00000514694 OR52B4Q8NGK2 314 aa11.88□□□□□ -0.51
MATR3-239ENST00000514694 USMG5Q96IX5 58 aa11.88□□□□□ -0.51
MATR3-239ENST00000514694 NUDT15Q9NV35 164 aa11.88□□□□□ -0.51
MATR3-239ENST00000514694 FBXL7Q9UJT9 491 aa11.88□□□□□ -0.51
MATR3-239ENST00000514694 A0A0G2JLM5 398 aa11.87□□□□□ -0.51
MATR3-239ENST00000514694 MFSD2BA6NFX1 497 aa11.87□□□□□ -0.51
MATR3-239ENST00000514694 G3V4G9 280 aa11.87□□□□□ -0.51
MATR3-239ENST00000514694 IFNA17P01571 189 aa11.87□□□□□ -0.51
MATR3-239ENST00000514694 IGHV3-23P01764 117 aa11.87□□□□□ -0.51
MATR3-239ENST00000514694 HLA-AP01891 365 aaKnown RBP11.87□□□□□ -0.51
MATR3-239ENST00000514694 DEFA4P12838 97 aa11.87□□□□□ -0.51
MATR3-239ENST00000514694 IGLL1P15814 213 aa11.87□□□□□ -0.51
MATR3-239ENST00000514694 MECP2P51608 486 aaKnown RBP11.87□□□□□ -0.51
MATR3-239ENST00000514694 SLURP1P55000 103 aa11.87□□□□□ -0.51
MATR3-239ENST00000514694 SRPXP78539 464 aa11.87□□□□□ -0.51
MATR3-239ENST00000514694 ATP5G2Q06055 141 aa11.87□□□□□ -0.51
MATR3-239ENST00000514694 ZNF616Q08AN1 781 aa11.87□□□□□ -0.51
MATR3-239ENST00000514694 EXOSC2Q13868 293 aaKnown RBP11.87□□□□□ -0.51
MATR3-239ENST00000514694 OXLD1Q5BKU9 147 aa11.87□□□□□ -0.51
MATR3-239ENST00000514694 HSD17B13Q7Z5P4 300 aaPredicted RBP11.87□□□□□ -0.51
MATR3-239ENST00000514694 C1QL4Q86Z23 238 aa11.87□□□□□ -0.51
MATR3-239ENST00000514694 OR2C3Q8N628 320 aa11.87□□□□□ -0.51
MATR3-239ENST00000514694 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.87□□□□□ -0.51
MATR3-239ENST00000514694 F11RQ9Y624 299 aaKnown RBP11.87□□□□□ -0.51
MATR3-239ENST00000514694 FAM240BA0A1B0GVZ2 78 aa11.86□□□□□ -0.51
MATR3-239ENST00000514694 HSPB1P04792 205 aaKnown RBP11.86□□□□□ -0.51
MATR3-239ENST00000514694 CD33P20138 364 aa11.86□□□□□ -0.51
MATR3-239ENST00000514694 C4orf46Q504U0 113 aa11.86□□□□□ -0.51
MATR3-239ENST00000514694 LYG2Q86SG7 212 aa11.86□□□□□ -0.51
MATR3-239ENST00000514694 CCDC140Q96MF4 163 aa11.86□□□□□ -0.51
MATR3-239ENST00000514694 PLEKHA3Q9HB20 300 aa11.86□□□□□ -0.51
MATR3-239ENST00000514694 DNAH3Q8TD57 4116 aa11.86□□□□□ -0.51
MATR3-239ENST00000514694 LINC01619G3V211 115 aa11.85□□□□□ -0.51
MATR3-239ENST00000514694 ADAP1O75689 374 aa11.85□□□□□ -0.51
MATR3-239ENST00000514694 DHFRP00374 187 aa11.85□□□□□ -0.51
MATR3-239ENST00000514694 HOXB5P09067 269 aa11.85□□□□□ -0.51
MATR3-239ENST00000514694 SULT1A3P0DMM9 295 aa11.85□□□□□ -0.51
MATR3-239ENST00000514694 SULT1A4P0DMN0 295 aa11.85□□□□□ -0.51
MATR3-239ENST00000514694 SAMD5Q5TGI4 173 aa11.85□□□□□ -0.51
MATR3-239ENST00000514694 MZT2BQ6NZ67 158 aa11.85□□□□□ -0.51
MATR3-239ENST00000514694 NRARPQ7Z6K4 114 aa11.85□□□□□ -0.51
MATR3-239ENST00000514694 DCUN1D4Q92564 292 aa11.85□□□□□ -0.51
MATR3-239ENST00000514694 DLX4Q92988 240 aaPredicted RBP11.85□□□□□ -0.51
MATR3-239ENST00000514694 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.84□□□□□ -0.51
MATR3-239ENST00000514694 IGHV3-21A0A0B4J1V1 117 aa11.84□□□□□ -0.51
MATR3-239ENST00000514694 DUXBA0A1W2PPF3 345 aa11.84□□□□□ -0.51
MATR3-239ENST00000514694 MPTX1A8MV57 137 aa11.84□□□□□ -0.51
MATR3-239ENST00000514694 PPP5D1E7EU14 171 aa11.84□□□□□ -0.51
MATR3-239ENST00000514694 INS-IGF2F8WCM5 200 aa11.84□□□□□ -0.51
MATR3-239ENST00000514694 BMPR1BO00238 502 aa11.84□□□□□ -0.51
MATR3-239ENST00000514694 PITX3O75364 302 aa11.84□□□□□ -0.51
MATR3-239ENST00000514694 DUS4LO95620 317 aaKnown RBP11.84□□□□□ -0.51
MATR3-239ENST00000514694 H2AFB2P0C5Z0 115 aa11.84□□□□□ -0.51
MATR3-239ENST00000514694 OR8U8P0C7N1 319 aa11.84□□□□□ -0.51
MATR3-239ENST00000514694 HIST1H1BP16401 226 aaKnown RBP11.84□□□□□ -0.51
MATR3-239ENST00000514694 HOXD3P31249 432 aaPredicted RBP11.84□□□□□ -0.51
MATR3-239ENST00000514694 HOXA1P49639 335 aaPredicted RBP11.84□□□□□ -0.51
MATR3-239ENST00000514694 SPCS3P61009 180 aa11.84□□□□□ -0.51
MATR3-239ENST00000514694 SMCO1Q147U7 214 aa11.84□□□□□ -0.51
MATR3-239ENST00000514694 PDLIM3Q53GG5 364 aaPredicted RBP11.84□□□□□ -0.51
MATR3-239ENST00000514694 GGNBP1Q5YKI7 109 aa11.84□□□□□ -0.51
MATR3-239ENST00000514694 SLC25A24Q6NUK1 477 aa11.84□□□□□ -0.51
MATR3-239ENST00000514694 ZNF114Q8NC26 417 aa11.84□□□□□ -0.51
MATR3-239ENST00000514694 OR1P1Q8NH06 330 aa11.84□□□□□ -0.51
MATR3-239ENST00000514694 OR52E5Q8NH55 327 aa11.84□□□□□ -0.51
MATR3-239ENST00000514694 DPF1Q92782 380 aa11.84□□□□□ -0.51
MATR3-239ENST00000514694 SEC22CQ9BRL7 303 aa11.84□□□□□ -0.51
MATR3-239ENST00000514694 PEF1Q9UBV8 284 aaKnown RBP11.84□□□□□ -0.51
MATR3-239ENST00000514694 K7EIM0 57 aa11.83□□□□□ -0.52
MATR3-239ENST00000514694 RNASE2P10153 161 aaKnown RBP11.83□□□□□ -0.52
MATR3-239ENST00000514694 TNFRSF9Q07011 255 aa11.83□□□□□ -0.52
MATR3-239ENST00000514694 PDCD10Q9BUL8 212 aa11.83□□□□□ -0.52
MATR3-239ENST00000514694 RANGRFQ9HD47 186 aaPredicted RBP11.83□□□□□ -0.52
MATR3-239ENST00000514694 TMED3Q9Y3Q3 217 aa11.83□□□□□ -0.52
MATR3-239ENST00000514694 A0A1B0GU03 582 aa11.82□□□□□ -0.52
MATR3-239ENST00000514694 F8W735 103 aaPredicted RBP11.82□□□□□ -0.52
MATR3-239ENST00000514694 SPNP16150 400 aa11.82□□□□□ -0.52
MATR3-239ENST00000514694 ERHP84090 104 aaKnown RBP11.82□□□□□ -0.52
MATR3-239ENST00000514694 BSXQ3C1V8 233 aa11.82□□□□□ -0.52
MATR3-239ENST00000514694 PVRIGQ6DKI7 326 aa11.82□□□□□ -0.52
MATR3-239ENST00000514694 CLEC19AQ6UXS0 136 aa11.82□□□□□ -0.52
MATR3-239ENST00000514694 ZNF502Q8TBZ5 544 aa11.82□□□□□ -0.52
MATR3-239ENST00000514694 ENKURQ8TC29 256 aa11.82□□□□□ -0.52
MATR3-239ENST00000514694 MITD1Q8WV92 249 aa11.82□□□□□ -0.52
MATR3-239ENST00000514694 TMEM170AQ8WVE7 144 aa11.82□□□□□ -0.52
MATR3-239ENST00000514694 HSPB7Q9UBY9 170 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms