RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 SELENOKQ9Y6D0 94 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 TRAV9-1A0A075B6T8 112 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 PEX7O00628 323 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 LILRA1O75019 489 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 LCN12Q6JVE5 192 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 UNQ5815/PRO19632Q6UWF5 114 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 OR10AG1Q8NH19 301 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 SHANK1Q9Y566 2161 aa6.49□□□□□ -1.37
CLCN3-209ENST00000513761 AKAP6Q13023 2319 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 MUC21A0A0G2JKD1 596 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 MUC21A0A140T8X8 626 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 IZUMO1RA6ND01 250 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 RPL7P18124 248 aaKnown RBP6.48□□□□□ -1.37
CLCN3-209ENST00000513761 TM4SF20Q53R12 229 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 MUC21Q5SSG8 566 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 ZNF841Q6ZN19 808 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 NOTCH4Q99466 2003 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 PPIHO43447 177 aaKnown RBP6.48□□□□□ -1.37
CLCN3-209ENST00000513761 KLF7O75840 302 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-209ENST00000513761 TDGF1P3P51864 188 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 GNG5P63218 68 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 FBLN7Q53RD9 439 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 TCF24Q7RTU0 167 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 COL25A1Q9BXS0 654 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-209ENST00000513761 MRPL32Q9BYC8 188 aaKnown RBP6.48□□□□□ -1.37
CLCN3-209ENST00000513761 AP5S1Q9NUS5 200 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 F5H697 171 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 LTBRP36941 435 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 CA7P43166 264 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 FOXL1Q12952 345 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 TREML4Q6UXN2 200 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 TMEM14EPQ6UXP3 125 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 DEFB124Q8NES8 71 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 C19orf24Q9BVV8 132 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 IFI27L2Q9H2X8 130 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 PEF1Q9UBV8 284 aaKnown RBP6.48□□□□□ -1.37
CLCN3-209ENST00000513761 POLR3KQ9Y2Y1 108 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-209ENST00000513761 PINLYPA6NC86 204 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 LIPFP07098 398 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 PRB4P10163 310 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-209ENST00000513761 SRSF9Q13242 221 aaKnown RBP eCLIP6.48□□□□□ -1.37
CLCN3-209ENST00000513761 IL15RAQ13261 267 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 DCAF16Q9NXF7 216 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 PLA2G2EQ9NZK7 142 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 THYN1Q9P016 225 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 PILRBQ9UKJ0 227 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 DENND4CQ5VZ89 1909 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 PPIAL4EA0A075B759 164 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 PPIAL4DF5H284 164 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 PFN1P07737 140 aaKnown RBP6.48□□□□□ -1.37
CLCN3-209ENST00000513761 PPIAL4FP0DN26 164 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 KIR2DL2P43627 348 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-209ENST00000513761 NRN1LQ496H8 165 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 DNLZQ5SXM8 178 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 AGMATQ9BSE5 352 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 PPIAL4AQ9Y536 164 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 CNOT1A5YKK6 2376 aaKnown RBP6.48□□□□□ -1.37
CLCN3-209ENST00000513761 PLXNB3Q9ULL4 1909 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 OR2T8A6NH00 312 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 KLK10O43240 276 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 FOXH1O75593 365 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 CRYABP02511 175 aaKnown RBP6.48□□□□□ -1.37
CLCN3-209ENST00000513761 LDLRAD2Q5SZI1 272 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 TMEM42Q69YG0 159 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 DEFB123Q8N688 67 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 MYOZ3Q8TDC0 251 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 SCNM1Q9BWG6 230 aa6.48□□□□□ -1.37
CLCN3-209ENST00000513761 SEPSECSQ9HD40 501 aaKnown RBP6.48□□□□□ -1.37
CLCN3-209ENST00000513761 NCOR1O75376 2440 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 TMEM265A0A087WTH1 108 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 IGKV1-6A0A0C4DH72 117 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 NBEAP1P0C6P0 100 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 PYYP10082 97 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 GGTLC1Q9BX51 225 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 GNB1LQ9BYB4 327 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 LPAR2Q9HBW0 351 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 H3BVH4 76 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 FCGR2BP31994 310 aaPredicted RBP6.47□□□□□ -1.37
CLCN3-209ENST00000513761 PAX9P55771 341 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 GGNQ86UU5 652 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 THSD7BQ9C0I4 1608 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 IGKV3-7A0A075B6H7 116 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 TRAV9-2A0A087WT02 112 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 MKRN2OSH3BPM6 223 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 PSPNO60542 156 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 APOHP02749 345 aaPredicted RBP6.47□□□□□ -1.37
CLCN3-209ENST00000513761 CECR9P0C854 216 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 ZNF726P1Q15940 193 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 WFDC3Q8IUB2 231 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 C18orf15Q96N68 181 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 SPTBN2O15020 2390 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 IFNL4K9M1U5 179 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 LHX2P50458 406 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 CRIM1Q9NZV1 1036 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 NKX2-8O15522 239 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 STAG3L2P0CL84 134 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 STAG3L3P0CL85 134 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 CDKN1AP38936 164 aa6.47□□□□□ -1.37
CLCN3-209ENST00000513761 TRIP6Q15654 476 aaKnown RBP6.47□□□□□ -1.37
CLCN3-209ENST00000513761 WDR31Q8NA23 367 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms