RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ZNF93P35789 620 aaPredicted RBP2.8□□□□□ -1.96
HTT-210ENST00000512909 CEACAM3P40198 252 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 GNG10P50151 68 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 PAX5Q02548 391 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 MEF2CQ06413 473 aaPredicted RBP2.8□□□□□ -1.96
HTT-210ENST00000512909 GPR176Q14439 515 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 CLINT1Q14677 625 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 TAF9Q16594 264 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 SPIN3Q5JUX0 258 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 RNASEKQ6P5S7 137 aaKnown RBP2.8□□□□□ -1.96
HTT-210ENST00000512909 GLIPR1L1Q6UWM5 242 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 PUSL1Q8N0Z8 303 aaKnown RBP2.8□□□□□ -1.96
HTT-210ENST00000512909 SYS1Q8N2H4 156 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 OSR2Q8N2R0 312 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 TMEM86BQ8N661 226 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 PACRGLQ8N7B6 248 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 Q8N9L7 120 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 OR51T1Q8NGJ9 327 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 OR52N1Q8NH53 320 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 KCNG3Q8TAE7 436 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 UBALD1Q8TB05 177 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 RPS4Y2Q8TD47 263 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 HAVCR2Q8TDQ0 301 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 LEAP2Q969E1 77 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 ARL11Q969Q4 196 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 TMEM203Q969S6 136 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 TMEM106AQ96A25 262 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 MALSU1Q96EH3 234 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 RDH12Q96NR8 316 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 RARRES2Q99969 163 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 TMED9Q9BVK6 235 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 GPR61Q9BZJ8 451 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 TMEM133Q9H2Q1 129 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 VCX3BQ9H321 246 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 GAL3ST2Q9H3Q3 398 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 BANF2Q9H503 90 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 FGF20Q9NP95 211 aaPredicted RBP2.8□□□□□ -1.96
HTT-210ENST00000512909 TMEM138Q9NPI0 162 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 C8orf4Q9NR00 106 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 ZNF222Q9UK12 451 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 VPREB3Q9UKI3 123 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 TRAPPC2LQ9UL33 140 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 TPRKBQ9Y3C4 175 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 WSB1Q9Y6I7 421 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 MAP1AP78559 2803 aaPredicted RBP2.8□□□□□ -1.96
HTT-210ENST00000512909 ACANP16112 2415 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 ARFGEF3Q5TH69 2177 aa2.8□□□□□ -1.96
HTT-210ENST00000512909 IGHV3-43A0A0B4J1X8 118 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 ODAMA1E959 279 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 NCBP2LA6PVI3 153 aaKnown RBP2.79□□□□□ -1.96
HTT-210ENST00000512909 C17orf98A8MV24 154 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 J3QRE1 110 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 SDCBPO00560 298 aaPredicted RBP2.79□□□□□ -1.96
HTT-210ENST00000512909 GABRPO00591 440 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 GEMIN2O14893 280 aaKnown RBP2.79□□□□□ -1.96
HTT-210ENST00000512909 MED6O75586 246 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 TMEM50AO95807 157 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 MOSP00540 346 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 GNAO1P09471 354 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 IGHV3-43DP0DP04 118 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 GTF2F2P13984 249 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 RCC1P18754 421 aaPredicted RBP2.79□□□□□ -1.96
HTT-210ENST00000512909 GZMHP20718 246 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 VHLP40337 213 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 TAS2R43P59537 309 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 ADARB1P78563 741 aaKnown RBP2.79□□□□□ -1.96
HTT-210ENST00000512909 TMEM183BQ1AE95 376 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 PIGYQ3MUY2 71 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 Q499Y3 187 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 CCDC58Q4VC31 144 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 ACSM3Q53FZ2 586 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 YIF1BQ5BJH7 314 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 RBM48Q5RL73 367 aaKnown RBP2.79□□□□□ -1.96
HTT-210ENST00000512909 XAF1Q6GPH4 301 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 CTRB2Q6GPI1 263 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 HCP5Q6MZN7 132 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 TMEM183AQ8IXX5 376 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 SAXO1Q8IYX7 474 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 DYNAPQ8N1N2 210 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 CHST4Q8NCG5 386 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 OR51A2Q8NGJ7 313 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 OR10X1Q8NGY0 326 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 OR4K15Q8NH41 348 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 ZNF596Q8TC21 504 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 APH1BQ8WW43 257 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 TNFRSF14Q92956 283 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 RPEQ96AT9 228 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 CNBD2Q96M20 576 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 HES4Q9HCC6 221 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 IDI2-AS1Q9NZ38 188 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 ZNRD1Q9P1U0 126 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 PITPNC1Q9UKF7 332 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 KLK12Q9UKR0 248 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 RABL2BQ9UNT1 228 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 RRP15Q9Y3B9 282 aaKnown RBP2.79□□□□□ -1.96
HTT-210ENST00000512909 GOLT1BQ9Y3E0 138 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 LINC00312Q9Y6C7 94 aa2.79□□□□□ -1.96
HTT-210ENST00000512909 SETD2Q9BYW2 2564 aaPredicted RBP2.79□□□□□ -1.96
HTT-210ENST00000512909 FLNAP21333 2647 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms