RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 PPYP01298 95 aa6.74□□□□□ -1.33
NUP54-211ENST00000512151 LINC00205P59089 165 aa6.74□□□□□ -1.33
NUP54-211ENST00000512151 Q6ZWC4 215 aa6.74□□□□□ -1.33
NUP54-211ENST00000512151 OR2AK2Q8NG84 335 aa6.74□□□□□ -1.33
NUP54-211ENST00000512151 OR51S1Q8NGJ8 323 aa6.74□□□□□ -1.33
NUP54-211ENST00000512151 OR13C8Q8NGS7 320 aa6.74□□□□□ -1.33
NUP54-211ENST00000512151 C2CD4CQ8TF44 421 aa6.74□□□□□ -1.33
NUP54-211ENST00000512151 ABHD14AQ9BUJ0 271 aa6.74□□□□□ -1.33
NUP54-211ENST00000512151 MRPL20Q9BYC9 149 aaKnown RBP6.74□□□□□ -1.33
NUP54-211ENST00000512151 CCL28Q9NRJ3 127 aa6.74□□□□□ -1.33
NUP54-211ENST00000512151 FLVCR2Q9UPI3 526 aa6.74□□□□□ -1.33
NUP54-211ENST00000512151 SAA2-SAA4A0A096LPE2 208 aa6.73□□□□□ -1.33
NUP54-211ENST00000512151 IGLL5B9A064 214 aa6.73□□□□□ -1.33
NUP54-211ENST00000512151 RBMXL2O75526 392 aaKnown RBP6.73□□□□□ -1.33
NUP54-211ENST00000512151 SAA2P0DJI9 122 aaPredicted RBP6.73□□□□□ -1.33
NUP54-211ENST00000512151 TBPP20226 339 aa6.73□□□□□ -1.33
NUP54-211ENST00000512151 GNRHRP30968 328 aa6.73□□□□□ -1.33
NUP54-211ENST00000512151 FXYD4P59646 89 aa6.73□□□□□ -1.33
NUP54-211ENST00000512151 TSPAN5P62079 268 aa6.73□□□□□ -1.33
NUP54-211ENST00000512151 EIF4EBP1Q13541 118 aaPredicted RBP6.73□□□□□ -1.33
NUP54-211ENST00000512151 AKIRIN2Q53H80 203 aa6.73□□□□□ -1.33
NUP54-211ENST00000512151 RPL39P5Q59GN2 51 aa6.73□□□□□ -1.33
NUP54-211ENST00000512151 Q5BKY6 102 aa6.73□□□□□ -1.33
NUP54-211ENST00000512151 LAMTOR1Q6IAA8 161 aa6.73□□□□□ -1.33
NUP54-211ENST00000512151 TMEM217Q8N7C4 229 aa6.73□□□□□ -1.33
NUP54-211ENST00000512151 EDARADDQ8WWZ3 215 aa6.73□□□□□ -1.33
NUP54-211ENST00000512151 MOB3AQ96BX8 217 aa6.73□□□□□ -1.33
NUP54-211ENST00000512151 GPHA2Q96T91 129 aa6.73□□□□□ -1.33
NUP54-211ENST00000512151 OR2D2Q9H210 308 aa6.73□□□□□ -1.33
NUP54-211ENST00000512151 GPN1Q9HCN4 374 aaPredicted RBP6.73□□□□□ -1.33
NUP54-211ENST00000512151 SDHAF2Q9NX18 166 aa6.73□□□□□ -1.33
NUP54-211ENST00000512151 PEF1Q9UBV8 284 aaKnown RBP6.73□□□□□ -1.33
NUP54-211ENST00000512151 DISC1C4P0D8 188 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 SSNA1O43805 119 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 CREBL2O60519 120 aaPredicted RBP6.72□□□□□ -1.33
NUP54-211ENST00000512151 IFNA4P05014 189 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 CXCL3P19876 107 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 TCTAP57738 103 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 RPL30P62888 115 aaKnown RBP6.72□□□□□ -1.33
NUP54-211ENST00000512151 TMEM267Q0VDI3 215 aaPredicted RBP6.72□□□□□ -1.33
NUP54-211ENST00000512151 MEF2DQ14814 521 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 RPEL1Q2QD12 228 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 SCGB2B2Q4G0G5 96 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 ZNF343Q6P1L6 599 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 ZNF833PQ6ZTB9 187 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 TMEM17Q86X19 198 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 C9orf62Q8N4C0 152 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 ARRDC1Q8N5I2 433 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 OR5T1Q8NG75 326 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 TERB2Q8NHR7 220 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 MARCH1Q8TCQ1 289 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 DYNLRB2Q8TF09 96 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 SECTM1Q8WVN6 248 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 ASB13Q8WXK3 278 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 CLCC1Q96S66 551 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 SLC5A7Q9GZV3 580 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 ZNF355PQ9NSJ1 428 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 PIPOXQ9P0Z9 390 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 SCP2D1Q9UJQ7 156 aa6.72□□□□□ -1.33
NUP54-211ENST00000512151 C16orf90A8MZG2 172 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 SMLR1H3BR10 107 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 BMPR1BO00238 502 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 RRHO14718 337 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 RAB29O14966 203 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 CT45A6P0DMU7 189 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 CT45A5P0DMU8 189 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 CT45A7P0DMV0 189 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 ANXA7P20073 488 aaKnown RBP6.71□□□□□ -1.33
NUP54-211ENST00000512151 UCP3P55916 312 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 BRWD1-AS2P59051 145 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 HERV-K104P61576 105 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 IDO2Q6ZQW0 420 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 ZNF818PQ6ZRF7 136 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 SLC16A13Q7RTY0 426 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 BVESQ8NE79 360 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 GRPEL2Q8TAA5 225 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 C11orf45Q8TAV5 145 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 SLC25A21Q9BQT8 299 aaPredicted RBP6.71□□□□□ -1.33
NUP54-211ENST00000512151 SEC22CQ9BRL7 303 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 RTBDNQ9BSG5 229 aaPredicted RBP6.71□□□□□ -1.33
NUP54-211ENST00000512151 ZNF436Q9C0F3 470 aaPredicted RBP6.71□□□□□ -1.33
NUP54-211ENST00000512151 PEMTQ9UBM1 199 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 FBXL7Q9UJT9 491 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 GPR132Q9UNW8 380 aa6.71□□□□□ -1.33
NUP54-211ENST00000512151 RBM7Q9Y580 266 aaKnown RBP6.71□□□□□ -1.33
NUP54-211ENST00000512151 FLG2Q5D862 2391 aaPredicted RBP6.71□□□□□ -1.34
NUP54-211ENST00000512151 LINC00473A8K010 186 aa6.7□□□□□ -1.34
NUP54-211ENST00000512151 TNFSF12O43508 249 aa6.7□□□□□ -1.34
NUP54-211ENST00000512151 GIPP09681 153 aaPredicted RBP6.7□□□□□ -1.34
NUP54-211ENST00000512151 FOLR2P14207 255 aa6.7□□□□□ -1.34
NUP54-211ENST00000512151 PI3P19957 117 aa6.7□□□□□ -1.34
NUP54-211ENST00000512151 FCGR2BP31994 310 aaPredicted RBP6.7□□□□□ -1.34
NUP54-211ENST00000512151 TMEM61Q8N0U2 210 aa6.7□□□□□ -1.34
NUP54-211ENST00000512151 LINC00528Q8N1L1 170 aa6.7□□□□□ -1.34
NUP54-211ENST00000512151 ZNF383Q8NA42 475 aa6.7□□□□□ -1.34
NUP54-211ENST00000512151 ZNF431Q8TF32 576 aaPredicted RBP6.7□□□□□ -1.34
NUP54-211ENST00000512151 CACNG8Q8WXS5 425 aa6.7□□□□□ -1.34
NUP54-211ENST00000512151 OR2A7Q96R45 310 aa6.7□□□□□ -1.34
NUP54-211ENST00000512151 PRRT1Q99946 306 aa6.7□□□□□ -1.34
NUP54-211ENST00000512151 MGAT4CQ9UBM8 478 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms