RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 OR2T6Q8NHC8 308 aa6.37□□□□□ -1.39
SMAD1-209ENST00000511125 TMEM170AQ8WVE7 144 aa6.37□□□□□ -1.39
SMAD1-209ENST00000511125 HYLS1Q96M11 299 aa6.37□□□□□ -1.39
SMAD1-209ENST00000511125 WNT10AQ9GZT5 417 aa6.37□□□□□ -1.39
SMAD1-209ENST00000511125 NDUFA4L2Q9NRX3 87 aa6.37□□□□□ -1.39
SMAD1-209ENST00000511125 FOXA2Q9Y261 457 aaPredicted RBP6.37□□□□□ -1.39
SMAD1-209ENST00000511125 STRAPQ9Y3F4 350 aaKnown RBP6.37□□□□□ -1.39
SMAD1-209ENST00000511125 TEX46H3BTG2 121 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 TRIM77I1YAP6 450 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 GPR137BO60478 399 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 OR2J3O76001 311 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 IGHV3-11P01762 117 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 OR8U8P0C7N1 319 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 ERHP84090 104 aaKnown RBP6.36□□□□□ -1.39
SMAD1-209ENST00000511125 RUNX1Q01196 453 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 KHDC1LQ5JSQ8 128 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 RPL7L1Q6DKI1 246 aaKnown RBP6.36□□□□□ -1.39
SMAD1-209ENST00000511125 TMUB2Q71RG4 321 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 SLC35E3Q7Z769 313 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 C9orf62Q8N4C0 152 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 AIFM2Q9BRQ8 373 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 WFDC1Q9HC57 220 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 FBXL17Q9UF56 701 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 TNFSF18Q9UNG2 199 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 A0A1B0GV50 99 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 PET100P0DJ07 73 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 OPRK1P41145 380 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 MFAP2P55001 183 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 PRCDQ00LT1 54 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 HAPLN4Q86UW8 402 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 SLC24A4Q8NFF2 622 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 NPBQ8NG41 125 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 P2RX4Q99571 388 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 PITPNC1Q9UKF7 332 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 VPREB3Q9UKI3 123 aa6.36□□□□□ -1.39
SMAD1-209ENST00000511125 UBE2L5PA0A1B0GUS4 154 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 TEX22C9J3V5 150 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 NDUFA3O95167 84 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 GATA2P23769 480 aaPredicted RBP6.35□□□□□ -1.39
SMAD1-209ENST00000511125 NPY1RP25929 384 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 VDAC2P45880 294 aaPredicted RBP6.35□□□□□ -1.39
SMAD1-209ENST00000511125 POU2AF1Q16633 256 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 ZNF562Q6V9R5 426 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 FAM216AQ8WUB2 273 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 NOTCH3Q9UM47 2321 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 IGLC7A0M8Q6 106 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 C15orf62A8K5M9 175 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 MED6O75586 246 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 SNRPCP09234 159 aaKnown RBP6.35□□□□□ -1.39
SMAD1-209ENST00000511125 PF4V1P10720 104 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 EGR2P11161 476 aaPredicted RBP6.35□□□□□ -1.39
SMAD1-209ENST00000511125 EBI3Q14213 229 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 FAM74A1Q5RGS3 127 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 ASPHD1Q5U4P2 390 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 ALKAL2Q6UX46 152 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 ACOT7LQ6ZUV0 252 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 KLK15Q9H2R5 256 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 FKBP11Q9NYL4 201 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 MRPL36Q9P0J6 103 aaKnown RBP6.35□□□□□ -1.39
SMAD1-209ENST00000511125 CDC42EP3Q9UKI2 254 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 SOX15O60248 233 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 OR2F1Q13607 317 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 OPCMLQ14982 345 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 ZNF429Q86V71 674 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 STX12Q86Y82 276 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 THNSL2Q86YJ6 484 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 OR5B3Q8NH48 314 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 RAB40CQ96S21 281 aa6.35□□□□□ -1.39
SMAD1-209ENST00000511125 LYRM2Q9NU23 88 aaPredicted RBP6.35□□□□□ -1.39
SMAD1-209ENST00000511125 A0A1W2PRX2 142 aa6.34□□□□□ -1.39
SMAD1-209ENST00000511125 CFDP00746 253 aaPredicted RBP6.34□□□□□ -1.39
SMAD1-209ENST00000511125 CRYBA1P05813 215 aa6.34□□□□□ -1.39
SMAD1-209ENST00000511125 SLC38A11Q08AI6 406 aa6.34□□□□□ -1.39
SMAD1-209ENST00000511125 OR10P1Q8NGE3 313 aa6.34□□□□□ -1.39
SMAD1-209ENST00000511125 OR8H1Q8NGG4 311 aa6.34□□□□□ -1.39
SMAD1-209ENST00000511125 ZNF418Q8TF45 676 aaPredicted RBP6.34□□□□□ -1.39
SMAD1-209ENST00000511125 FAM212BQ9NTI7 297 aaPredicted RBP6.34□□□□□ -1.39
SMAD1-209ENST00000511125 DMRT1Q9Y5R6 373 aa6.34□□□□□ -1.39
SMAD1-209ENST00000511125 KANTRA0A1W2PQU2 76 aa6.34□□□□□ -1.39
SMAD1-209ENST00000511125 RNASE2P10153 161 aaKnown RBP6.34□□□□□ -1.39
SMAD1-209ENST00000511125 PRB4P10163 310 aaPredicted RBP6.34□□□□□ -1.39
SMAD1-209ENST00000511125 S100A11P31949 105 aa6.34□□□□□ -1.39
SMAD1-209ENST00000511125 AKR1C1Q04828 323 aa6.34□□□□□ -1.39
SMAD1-209ENST00000511125 RSG1Q9BU20 258 aa6.34□□□□□ -1.39
SMAD1-209ENST00000511125 SH3BGRL3Q9H299 93 aa6.34□□□□□ -1.39
SMAD1-209ENST00000511125 ANKRD34BA5PLL1 514 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 SLC25A6P12236 298 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 P2RY1P47900 373 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 SMIM8Q96KF7 97 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 FNDC4Q9H6D8 234 aaPredicted RBP6.33□□□□□ -1.4
SMAD1-209ENST00000511125 TRAV41A0A0B4J266 112 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 MFSD2BA6NFX1 497 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 HMGB3O15347 200 aaKnown RBP6.33□□□□□ -1.4
SMAD1-209ENST00000511125 NDUFB8O95169 186 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 MT-CO2P00403 227 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 SLC25A4P12235 298 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 ELLP55199 621 aaPredicted RBP6.33□□□□□ -1.4
SMAD1-209ENST00000511125 BAXQ07812 192 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 CENPVQ7Z7K6 275 aaPredicted RBP6.33□□□□□ -1.4
SMAD1-209ENST00000511125 NPIPB3Q92617 1050 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms