RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 FAM231BA6NCW3 169 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 IGHV3-13P01766 116 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 TRGC2P03986 189 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 LGALS1P09382 135 aaKnown RBP4.08□□□□□ -1.76
NUP54-210ENST00000510884 OR5AL1P0C617 328 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 EDNRAP25101 427 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 PRSS3P35030 304 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 POLR2JP52435 117 aaKnown RBP4.08□□□□□ -1.76
NUP54-210ENST00000510884 PAX8Q06710 450 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 CATR1Q13166 79 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 ELOBQ15370 118 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 QSER1Q2KHR3 1735 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 TIGITQ495A1 244 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 MEIG1Q5JSS6 88 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 ZNF684Q5T5D7 378 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 AADACL3Q5VUY0 350 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 GPR179Q6PRD1 2367 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 AMTNQ6UX39 209 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 ZNF730Q6ZMV8 503 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 C1orf174Q8IYL3 243 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 TPRX1Q8N7U7 411 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 ZFP41Q8N8Y5 198 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 Q8NBF4 154 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 SUMF1Q8NBK3 374 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 MDS2Q8NDY4 140 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 OR10D3Q8NH80 312 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.08□□□□□ -1.76
NUP54-210ENST00000510884 RTN4IP1Q8WWV3 396 aaPredicted RBP4.08□□□□□ -1.76
NUP54-210ENST00000510884 ADAT3Q96EY9 351 aaPredicted RBP4.08□□□□□ -1.76
NUP54-210ENST00000510884 C9orf85Q96MD7 179 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 AQP10Q96PS8 301 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 SDF2Q99470 211 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 SPIN2AQ99865 258 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 FOXC2Q99958 501 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 SPIN2BQ9BPZ2 258 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 MRPL45Q9BRJ2 306 aaKnown RBP4.08□□□□□ -1.76
NUP54-210ENST00000510884 AGMATQ9BSE5 352 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 FXYD6Q9H0Q3 95 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 VSIRQ9H7M9 311 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 UBE2TQ9NPD8 197 aaPredicted RBP4.08□□□□□ -1.76
NUP54-210ENST00000510884 NDUFB11Q9NX14 153 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 WASHC3Q9Y3C0 194 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 FIS1Q9Y3D6 152 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 MPC1Q9Y5U8 109 aa4.08□□□□□ -1.76
NUP54-210ENST00000510884 FOCADQ5VW36 1801 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 RBBP6Q7Z6E9 1792 aaKnown RBP4.07□□□□□ -1.76
NUP54-210ENST00000510884 MRC1P22897 1456 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 TRGV10A0A0A0MS01 117 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 TMED7-TICAM2A0A0A6YYA0 188 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 LOC102725191A0A1B0GVB3 256 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 RIIAD1A6NNX1 92 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 EEF1E1-BLOC1S5C9J1V9 151 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 UMAD1C9J7I0 102 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 H3BRM9 83 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 K7ENP7 123 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 EEF1E1O43324 174 aaKnown RBP4.07□□□□□ -1.76
NUP54-210ENST00000510884 HYPMO75409 117 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 PROSCO94903 275 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 REG1AP05451 166 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 RPS4Y1P22090 263 aaKnown RBP4.07□□□□□ -1.76
NUP54-210ENST00000510884 CTRLP40313 264 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 MARCKSL1P49006 195 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 TMEM258P61165 79 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 Q0VG73 95 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 LAMTOR4Q0VGL1 99 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 TAF10Q12962 218 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 CEACAM16Q2WEN9 425 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 EPGNQ6UW88 154 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 LCN15Q6UWW0 184 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 Q6ZUT4 128 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 PRR22Q8IZ63 422 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 OR51G1Q8NGK1 321 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 FNDC9Q8TBE3 224 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 FRZBQ92765 325 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 TMEM54Q969K7 222 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 STARD4Q96DR4 205 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 SFXN3Q9BWM7 321 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 SLC35B3Q9H1N7 401 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 NPVFQ9HCQ7 196 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 LSM7Q9UK45 103 aaKnown RBP4.07□□□□□ -1.76
NUP54-210ENST00000510884 RARRES3Q9UL19 164 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 USP34Q70CQ2 3546 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 ZNF646O15015 1829 aaPredicted RBP4.07□□□□□ -1.76
NUP54-210ENST00000510884 CRYBG1Q9Y4K1 1723 aa4.07□□□□□ -1.76
NUP54-210ENST00000510884 FASNP49327 2511 aaKnown RBP4.06□□□□□ -1.76
NUP54-210ENST00000510884 MYH14Q7Z406 1995 aaKnown RBP4.06□□□□□ -1.76
NUP54-210ENST00000510884 A0A087WWV3 80 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 TEX50A0A1B0GTY4 177 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 TEX48A0A1B0GUV7 120 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 C17orf112F2Z3M2 114 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 AGPAT2O15120 278 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 YPEL1O60688 119 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 UBL3O95164 117 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 ZNF682O95780 498 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 FCGR3AP08637 254 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 FABP2P12104 132 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 GPR183P32249 361 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 ASIPP42127 132 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 HINT1P49773 126 aaPredicted RBP4.06□□□□□ -1.76
NUP54-210ENST00000510884 FABP6P51161 128 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms