RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 MTFP1Q9UDX5 166 aa2.57□□□□□ -2
NUP54-209ENST00000510569 TBX21Q9UL17 535 aa2.57□□□□□ -2
NUP54-209ENST00000510569 MCTS1Q9ULC4 181 aaKnown RBP2.57□□□□□ -2
NUP54-209ENST00000510569 TRIP11Q15643 1979 aa2.56□□□□□ -2
NUP54-209ENST00000510569 CITO14578 2027 aa2.56□□□□□ -2
NUP54-209ENST00000510569 IGHV3OR16-13A0A075B7E8 117 aa2.56□□□□□ -2
NUP54-209ENST00000510569 hCG_1818297A0A087WSY0 165 aa2.56□□□□□ -2
NUP54-209ENST00000510569 PLAC8L1A1L4L8 177 aa2.56□□□□□ -2
NUP54-209ENST00000510569 C5orf63A6NC05 138 aa2.56□□□□□ -2
NUP54-209ENST00000510569 A6NDX4 124 aa2.56□□□□□ -2
NUP54-209ENST00000510569 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.56□□□□□ -2
NUP54-209ENST00000510569 AGPAT2O15120 278 aa2.56□□□□□ -2
NUP54-209ENST00000510569 PSPHP1O15172 72 aa2.56□□□□□ -2
NUP54-209ENST00000510569 GYG2O15488 501 aa2.56□□□□□ -2
NUP54-209ENST00000510569 DHRS3O75911 302 aa2.56□□□□□ -2
NUP54-209ENST00000510569 CSN2P05814 226 aa2.56□□□□□ -2
NUP54-209ENST00000510569 FGF6P10767 208 aa2.56□□□□□ -2
NUP54-209ENST00000510569 ZNF30P17039 623 aa2.56□□□□□ -2
NUP54-209ENST00000510569 RPL7P18124 248 aaKnown RBP2.56□□□□□ -2
NUP54-209ENST00000510569 RPS3P23396 243 aaKnown RBP eCLIP2.56□□□□□ -2
NUP54-209ENST00000510569 CMPK1P30085 196 aa2.56□□□□□ -2
NUP54-209ENST00000510569 G6PCP35575 357 aa2.56□□□□□ -2
NUP54-209ENST00000510569 CCL23P55773 120 aa2.56□□□□□ -2
NUP54-209ENST00000510569 TAS2R30P59541 319 aa2.56□□□□□ -2
NUP54-209ENST00000510569 RPS21P63220 83 aaKnown RBP2.56□□□□□ -2
NUP54-209ENST00000510569 ZNF763Q0D2J5 394 aa2.56□□□□□ -2
NUP54-209ENST00000510569 HTR4Q13639 388 aa2.56□□□□□ -2
NUP54-209ENST00000510569 MOBPQ13875 183 aa2.56□□□□□ -2
NUP54-209ENST00000510569 LY6EQ16553 131 aa2.56□□□□□ -2
NUP54-209ENST00000510569 C12orf74Q32Q52 190 aa2.56□□□□□ -2
NUP54-209ENST00000510569 Q499Y3 187 aa2.56□□□□□ -2
NUP54-209ENST00000510569 LCN8Q6JVE9 175 aa2.56□□□□□ -2
NUP54-209ENST00000510569 PRSS54Q6PEW0 395 aa2.56□□□□□ -2
NUP54-209ENST00000510569 ARL9Q6T311 187 aa2.56□□□□□ -2
NUP54-209ENST00000510569 IGFL1Q6UW32 110 aa2.56□□□□□ -2
NUP54-209ENST00000510569 CLEC19AQ6UXS0 136 aa2.56□□□□□ -2
NUP54-209ENST00000510569 Q6ZSR6 202 aa2.56□□□□□ -2
NUP54-209ENST00000510569 VN1R4Q7Z5H5 301 aa2.56□□□□□ -2
NUP54-209ENST00000510569 ZNF429Q86V71 674 aa2.56□□□□□ -2
NUP54-209ENST00000510569 C8orf59Q8N0T1 100 aaPredicted RBP2.56□□□□□ -2
NUP54-209ENST00000510569 Q8N9W7 124 aa2.56□□□□□ -2
NUP54-209ENST00000510569 SFT2D1Q8WV19 159 aa2.56□□□□□ -2
NUP54-209ENST00000510569 DCAKDQ8WVC6 231 aa2.56□□□□□ -2
NUP54-209ENST00000510569 FAM151AQ8WW52 585 aa2.56□□□□□ -2
NUP54-209ENST00000510569 FAM3DQ96BQ1 224 aa2.56□□□□□ -2
NUP54-209ENST00000510569 CMBLQ96DG6 245 aa2.56□□□□□ -2
NUP54-209ENST00000510569 SMIM8Q96KF7 97 aa2.56□□□□□ -2
NUP54-209ENST00000510569 FCRL1Q96LA6 429 aa2.56□□□□□ -2
NUP54-209ENST00000510569 TSPAN32Q96QS1 320 aa2.56□□□□□ -2
NUP54-209ENST00000510569 OR52B2Q96RD2 323 aa2.56□□□□□ -2
NUP54-209ENST00000510569 TMEM147Q9BVK8 224 aa2.56□□□□□ -2
NUP54-209ENST00000510569 SFXN3Q9BWM7 321 aa2.56□□□□□ -2
NUP54-209ENST00000510569 ZNF471Q9BX82 626 aaPredicted RBP2.56□□□□□ -2
NUP54-209ENST00000510569 SLC25A31Q9H0C2 315 aa2.56□□□□□ -2
NUP54-209ENST00000510569 POPDC3Q9HBV1 291 aa2.56□□□□□ -2
NUP54-209ENST00000510569 MRPL16Q9NX20 251 aaKnown RBP2.56□□□□□ -2
NUP54-209ENST00000510569 ZFP30Q9Y2G7 519 aa2.56□□□□□ -2
NUP54-209ENST00000510569 ZNF638Q14966 1978 aaKnown RBP2.56□□□□□ -2
NUP54-209ENST00000510569 MYO18AQ92614 2054 aaKnown RBP2.56□□□□□ -2
NUP54-209ENST00000510569 IGKV1D-17A0A075B6S4 117 aa2.55□□□□□ -2
NUP54-209ENST00000510569 A0A0G2JN53 185 aa2.55□□□□□ -2
NUP54-209ENST00000510569 A0A0J9YXV3 536 aa2.55□□□□□ -2
NUP54-209ENST00000510569 OR4C45A6NMZ5 311 aa2.55□□□□□ -2
NUP54-209ENST00000510569 CORTO00230 105 aa2.55□□□□□ -2
NUP54-209ENST00000510569 ZNF207O43670 478 aaKnown RBP2.55□□□□□ -2
NUP54-209ENST00000510569 GNG7O60262 68 aa2.55□□□□□ -2
NUP54-209ENST00000510569 NRASP01111 189 aa2.55□□□□□ -2
NUP54-209ENST00000510569 TRBV12-3P01733 135 aa2.55□□□□□ -2
NUP54-209ENST00000510569 HLA-DQB2P05538 268 aa2.55□□□□□ -2
NUP54-209ENST00000510569 SCTP09683 121 aa2.55□□□□□ -2
NUP54-209ENST00000510569 CPMP14384 443 aa2.55□□□□□ -2
NUP54-209ENST00000510569 RPS4Y1P22090 263 aaKnown RBP2.55□□□□□ -2
NUP54-209ENST00000510569 KDELR1P24390 212 aa2.55□□□□□ -2
NUP54-209ENST00000510569 GADD45AP24522 165 aa2.55□□□□□ -2
NUP54-209ENST00000510569 SCN1AP35498 2009 aa2.55□□□□□ -2
NUP54-209ENST00000510569 LHX2P50458 406 aa2.55□□□□□ -2
NUP54-209ENST00000510569 TDGF1P3P51864 188 aa2.55□□□□□ -2
NUP54-209ENST00000510569 ZNF140P52738 457 aaPredicted RBP2.55□□□□□ -2
NUP54-209ENST00000510569 RPL26P61254 145 aaKnown RBP2.55□□□□□ -2
NUP54-209ENST00000510569 MEF2CQ06413 473 aaPredicted RBP2.55□□□□□ -2
NUP54-209ENST00000510569 FZD2Q14332 565 aa2.55□□□□□ -2
NUP54-209ENST00000510569 FBXL19-AS1Q494R0 122 aa2.55□□□□□ -2
NUP54-209ENST00000510569 SCGB2B2Q4G0G5 96 aa2.55□□□□□ -2
NUP54-209ENST00000510569 CENPWQ5EE01 88 aa2.55□□□□□ -2
NUP54-209ENST00000510569 FAM222AQ5U5X8 452 aa2.55□□□□□ -2
NUP54-209ENST00000510569 TMEM236Q5W0B7 351 aa2.55□□□□□ -2
NUP54-209ENST00000510569 TEX261Q6UWH6 196 aa2.55□□□□□ -2
NUP54-209ENST00000510569 ZNF620Q6ZNG0 422 aa2.55□□□□□ -2
NUP54-209ENST00000510569 RNF165Q6ZSG1 346 aa2.55□□□□□ -2
NUP54-209ENST00000510569 TCF23Q7RTU1 214 aa2.55□□□□□ -2
NUP54-209ENST00000510569 ZCCHC24Q8N2G6 241 aaKnown RBP2.55□□□□□ -2
NUP54-209ENST00000510569 SLC25A45Q8N413 288 aa2.55□□□□□ -2
NUP54-209ENST00000510569 OR11H7Q8NGC8 314 aa2.55□□□□□ -2
NUP54-209ENST00000510569 OR13C8Q8NGS7 320 aa2.55□□□□□ -2
NUP54-209ENST00000510569 OR2T4Q8NH00 348 aa2.55□□□□□ -2
NUP54-209ENST00000510569 OR5W2Q8NH69 310 aa2.55□□□□□ -2
NUP54-209ENST00000510569 OR5K1Q8NHB7 308 aa2.55□□□□□ -2
NUP54-209ENST00000510569 TERB2Q8NHR7 220 aa2.55□□□□□ -2
NUP54-209ENST00000510569 ORAOV1Q8WV07 137 aa2.55□□□□□ -2
NUP54-209ENST00000510569 LRRC29Q8WV35 223 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms