RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ANAPC10Q9UM13 185 aa11.64□□□□□ -0.55
RAB40C-202ENST00000509637 KLK5Q9Y337 293 aaPredicted RBP11.64□□□□□ -0.55
RAB40C-202ENST00000509637 IGKV3-7A0A075B6H7 116 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 IGHV7-4-1A0A0J9YVY3 117 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 MARCH11A6NNE9 402 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 SCGNO76038 276 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 KRASP01116 189 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 IGKV1-39P01597 117 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 IGKV1D-39P04432 117 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 RLN1P04808 185 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 F2RP25116 425 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 CATR1Q13166 79 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 SPSB3Q6PJ21 355 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 GBGT1Q8N5D6 347 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 FAM24BQ8N5W8 94 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 UBAC2Q8NBM4 344 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 AIFM2Q9BRQ8 373 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 FXYD6Q9H0Q3 95 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 CSTL1Q9H114 145 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 THYN1Q9P016 225 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 SSR3Q9UNL2 185 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 OR51B2Q9Y5P1 312 aa11.63□□□□□ -0.55
RAB40C-202ENST00000509637 OR4C46A6NHA9 309 aa11.62□□□□□ -0.55
RAB40C-202ENST00000509637 C15orf62A8K5M9 175 aa11.62□□□□□ -0.55
RAB40C-202ENST00000509637 GIG44P09565 113 aaPredicted RBP11.62□□□□□ -0.55
RAB40C-202ENST00000509637 LAMTOR1Q6IAA8 161 aa11.62□□□□□ -0.55
RAB40C-202ENST00000509637 LYSMD2Q8IV50 215 aa11.62□□□□□ -0.55
RAB40C-202ENST00000509637 MOB3AQ96BX8 217 aa11.62□□□□□ -0.55
RAB40C-202ENST00000509637 OR10C1Q96KK4 312 aa11.62□□□□□ -0.55
RAB40C-202ENST00000509637 RARRES2Q99969 163 aa11.62□□□□□ -0.55
RAB40C-202ENST00000509637 BLOC1S6Q9UL45 172 aa11.62□□□□□ -0.55
RAB40C-202ENST00000509637 PCLOQ9Y6V0 5065 aa11.61□□□□□ -0.55
RAB40C-202ENST00000509637 MRPS14O60783 128 aaKnown RBP11.61□□□□□ -0.55
RAB40C-202ENST00000509637 PMP2P02689 132 aa11.61□□□□□ -0.55
RAB40C-202ENST00000509637 Q56UQ5 140 aa11.61□□□□□ -0.55
RAB40C-202ENST00000509637 OR11H2Q8NH07 326 aa11.61□□□□□ -0.55
RAB40C-202ENST00000509637 LSM10Q969L4 123 aaKnown RBP11.61□□□□□ -0.55
RAB40C-202ENST00000509637 DGCR14Q96DF8 476 aaKnown RBP11.61□□□□□ -0.55
RAB40C-202ENST00000509637 ATP6V0BQ99437 205 aa11.61□□□□□ -0.55
RAB40C-202ENST00000509637 ZNF2Q9BSG1 426 aaPredicted RBP11.61□□□□□ -0.55
RAB40C-202ENST00000509637 TMEM14BQ9NUH8 114 aa11.61□□□□□ -0.55
RAB40C-202ENST00000509637 EHFQ9NZC4 300 aa11.61□□□□□ -0.55
RAB40C-202ENST00000509637 RAB26Q9ULW5 256 aa11.61□□□□□ -0.55
RAB40C-202ENST00000509637 HECTD4Q9Y4D8 3996 aa11.6□□□□□ -0.55
RAB40C-202ENST00000509637 NAT1P18440 290 aa11.6□□□□□ -0.55
RAB40C-202ENST00000509637 SCAND1P57086 179 aa11.6□□□□□ -0.55
RAB40C-202ENST00000509637 IZUMO4Q1ZYL8 232 aa11.6□□□□□ -0.55
RAB40C-202ENST00000509637 THOC7Q6I9Y2 204 aaKnown RBP11.6□□□□□ -0.55
RAB40C-202ENST00000509637 CADM3Q8N126 398 aa11.6□□□□□ -0.55
RAB40C-202ENST00000509637 TMEM116Q8NCL8 245 aa11.6□□□□□ -0.55
RAB40C-202ENST00000509637 SLC25A46Q96AG3 418 aa11.6□□□□□ -0.55
RAB40C-202ENST00000509637 VCX3BQ9H321 246 aa11.6□□□□□ -0.55
RAB40C-202ENST00000509637 FBXL17Q9UF56 701 aa11.6□□□□□ -0.55
RAB40C-202ENST00000509637 APLNQ9ULZ1 77 aa11.6□□□□□ -0.55
RAB40C-202ENST00000509637 A0A0A6YYH2 397 aa11.59□□□□□ -0.55
RAB40C-202ENST00000509637 LOC100506127A0A0U1RQW1 187 aa11.59□□□□□ -0.55
RAB40C-202ENST00000509637 A6NJ64 397 aa11.59□□□□□ -0.55
RAB40C-202ENST00000509637 MPTX1A8MV57 137 aa11.59□□□□□ -0.55
RAB40C-202ENST00000509637 NUPL2O15504 423 aaKnown RBP11.59□□□□□ -0.55
RAB40C-202ENST00000509637 RBMY1A1P0DJD3 496 aaKnown RBP11.59□□□□□ -0.55
RAB40C-202ENST00000509637 RBMY1CP0DJD4 496 aa11.59□□□□□ -0.55
RAB40C-202ENST00000509637 HSPA13P48723 471 aa11.59□□□□□ -0.55
RAB40C-202ENST00000509637 RBMY1FQ15415 496 aaKnown RBP11.59□□□□□ -0.55
RAB40C-202ENST00000509637 HSD17B13Q7Z5P4 300 aaPredicted RBP11.59□□□□□ -0.55
RAB40C-202ENST00000509637 ST8SIA2Q92186 375 aa11.59□□□□□ -0.55
RAB40C-202ENST00000509637 SEC22AQ96IW7 307 aa11.59□□□□□ -0.55
RAB40C-202ENST00000509637 NXF2Q9GZY0 626 aaKnown RBP11.59□□□□□ -0.55
RAB40C-202ENST00000509637 IGHV3-66A0A0C4DH42 116 aa11.58□□□□□ -0.56
RAB40C-202ENST00000509637 XRCC3O43542 346 aa11.58□□□□□ -0.56
RAB40C-202ENST00000509637 ATP6V1G2O95670 118 aa11.58□□□□□ -0.56
RAB40C-202ENST00000509637 MT-CO2P00403 227 aa11.58□□□□□ -0.56
RAB40C-202ENST00000509637 HERV-K104P61576 105 aa11.58□□□□□ -0.56
RAB40C-202ENST00000509637 LEMD1Q68G75 181 aa11.58□□□□□ -0.56
RAB40C-202ENST00000509637 TOMM20LQ6UXN7 152 aa11.58□□□□□ -0.56
RAB40C-202ENST00000509637 TCF24Q7RTU0 167 aa11.58□□□□□ -0.56
RAB40C-202ENST00000509637 OR1P1Q8NH06 330 aa11.58□□□□□ -0.56
RAB40C-202ENST00000509637 C11orf45Q8TAV5 145 aa11.58□□□□□ -0.56
RAB40C-202ENST00000509637 GATAD1Q8WUU5 269 aa11.58□□□□□ -0.56
RAB40C-202ENST00000509637 MISP3Q96FF7 219 aa11.58□□□□□ -0.56
RAB40C-202ENST00000509637 C11orf68Q9H3H3 251 aaKnown RBP11.58□□□□□ -0.56
RAB40C-202ENST00000509637 VSIRQ9H7M9 311 aa11.58□□□□□ -0.56
RAB40C-202ENST00000509637 DIABLOQ9NR28 239 aa11.58□□□□□ -0.56
RAB40C-202ENST00000509637 MRPL36Q9P0J6 103 aaKnown RBP11.58□□□□□ -0.56
RAB40C-202ENST00000509637 FAT2Q9NYQ8 4349 aa11.57□□□□□ -0.56
RAB40C-202ENST00000509637 C15orf61A6NNL5 157 aa11.57□□□□□ -0.56
RAB40C-202ENST00000509637 ERVK-16P61578 105 aa11.57□□□□□ -0.56
RAB40C-202ENST00000509637 PHLDA2Q53GA4 152 aa11.57□□□□□ -0.56
RAB40C-202ENST00000509637 TMEM217Q8N7C4 229 aa11.57□□□□□ -0.56
RAB40C-202ENST00000509637 Q8NAQ8 132 aa11.57□□□□□ -0.56
RAB40C-202ENST00000509637 ZFAND3Q9H8U3 227 aa11.57□□□□□ -0.56
RAB40C-202ENST00000509637 TRAV14DV4A0A0A6YYC5 116 aa11.56□□□□□ -0.56
RAB40C-202ENST00000509637 A0A1B0GU03 582 aa11.56□□□□□ -0.56
RAB40C-202ENST00000509637 DFFBO76075 338 aa11.56□□□□□ -0.56
RAB40C-202ENST00000509637 YIF1AO95070 293 aa11.56□□□□□ -0.56
RAB40C-202ENST00000509637 CBX5P45973 191 aa11.56□□□□□ -0.56
RAB40C-202ENST00000509637 MFAP4P55083 255 aa11.56□□□□□ -0.56
RAB40C-202ENST00000509637 TAS2R20P59543 309 aa11.56□□□□□ -0.56
RAB40C-202ENST00000509637 DEFB131AP59861 70 aa11.56□□□□□ -0.56
RAB40C-202ENST00000509637 RBMS2Q15434 407 aaKnown RBP11.56□□□□□ -0.56
RAB40C-202ENST00000509637 MLANAQ16655 118 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms