RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 GPHB5Q86YW7 130 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 SELENOHQ8IZQ5 122 aaKnown RBP8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 DCUN1D4Q92564 292 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 TMEM230Q96A57 120 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 ALX4Q9H161 411 aaPredicted RBP8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 GAR1Q9NY12 217 aaKnown RBP8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 PTTG2Q9NZH5 202 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 SHPKQ9UHJ6 478 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 FBXL7Q9UJT9 491 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 DMRT1Q9Y5R6 373 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 F11RQ9Y624 299 aaKnown RBP8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 LGALS9O00182 355 aa8.14□□□□□ -1.11
POLR2J3-213ENST00000508848 RBMXL2O75526 392 aaKnown RBP8.14□□□□□ -1.11
POLR2J3-213ENST00000508848 NDUFB6O95139 128 aa8.14□□□□□ -1.11
POLR2J3-213ENST00000508848 INPP1P49441 399 aa8.14□□□□□ -1.11
POLR2J3-213ENST00000508848 AKR1C2P52895 323 aa8.14□□□□□ -1.11
POLR2J3-213ENST00000508848 ATP5IP56385 69 aaPredicted RBP8.14□□□□□ -1.11
POLR2J3-213ENST00000508848 SPCS3P61009 180 aa8.14□□□□□ -1.11
POLR2J3-213ENST00000508848 DEFA6Q01524 100 aa8.14□□□□□ -1.11
POLR2J3-213ENST00000508848 TRIM16LQ309B1 348 aa8.14□□□□□ -1.11
POLR2J3-213ENST00000508848 TRIQKQ629K1 86 aa8.14□□□□□ -1.11
POLR2J3-213ENST00000508848 ZNF57Q68EA5 555 aaPredicted RBP8.14□□□□□ -1.11
POLR2J3-213ENST00000508848 LGI3Q8N145 548 aa8.14□□□□□ -1.11
POLR2J3-213ENST00000508848 OR2C3Q8N628 320 aa8.14□□□□□ -1.11
POLR2J3-213ENST00000508848 OR10W1Q8NGF6 305 aa8.14□□□□□ -1.11
POLR2J3-213ENST00000508848 CASTOR1Q8WTX7 329 aa8.14□□□□□ -1.11
POLR2J3-213ENST00000508848 DLX4Q92988 240 aaPredicted RBP8.14□□□□□ -1.11
POLR2J3-213ENST00000508848 TXN2Q99757 166 aa8.14□□□□□ -1.11
POLR2J3-213ENST00000508848 IGHV4OR15-8A0A075B7B6 117 aa8.13□□□□□ -1.11
POLR2J3-213ENST00000508848 A0A087WW49 117 aa8.13□□□□□ -1.11
POLR2J3-213ENST00000508848 A0A1B0GU03 582 aa8.13□□□□□ -1.11
POLR2J3-213ENST00000508848 DBX1A6NMT0 343 aa8.13□□□□□ -1.11
POLR2J3-213ENST00000508848 GGCTO75223 188 aaKnown RBP8.13□□□□□ -1.11
POLR2J3-213ENST00000508848 IGHV3-11P01762 117 aa8.13□□□□□ -1.11
POLR2J3-213ENST00000508848 APELAP0DMC3 54 aa8.13□□□□□ -1.11
POLR2J3-213ENST00000508848 MYOD1P15172 320 aa8.13□□□□□ -1.11
POLR2J3-213ENST00000508848 HOXD3P31249 432 aaPredicted RBP8.13□□□□□ -1.11
POLR2J3-213ENST00000508848 CCR6P51684 374 aa8.13□□□□□ -1.11
POLR2J3-213ENST00000508848 DCTN2Q13561 401 aaKnown RBP8.13□□□□□ -1.11
POLR2J3-213ENST00000508848 BSXQ3C1V8 233 aa8.13□□□□□ -1.11
POLR2J3-213ENST00000508848 SPSB3Q6PJ21 355 aa8.13□□□□□ -1.11
POLR2J3-213ENST00000508848 LHFPL5Q8TAF8 219 aa8.13□□□□□ -1.11
POLR2J3-213ENST00000508848 EEF1AKMT3Q96AZ1 226 aa8.13□□□□□ -1.11
POLR2J3-213ENST00000508848 DUX3Q96PT4 197 aa8.13□□□□□ -1.11
POLR2J3-213ENST00000508848 ELOVL1Q9BW60 279 aa8.13□□□□□ -1.11
POLR2J3-213ENST00000508848 NSG2Q9Y328 171 aa8.13□□□□□ -1.11
POLR2J3-213ENST00000508848 SEC14L6B5MCN3 397 aa8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 CORTO00230 105 aa8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 ST8SIA3O43173 380 aa8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 OR2J3O76001 311 aa8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 NDUFB8O95169 186 aa8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 LY86O95711 162 aa8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 HLA-AP01891 365 aaKnown RBP8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 AKR1C4P17516 323 aa8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 MECP2P51608 486 aaKnown RBP8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 SUB1P53999 127 aaKnown RBP eCLIP8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 EXOSC2Q13868 293 aaKnown RBP8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 NMSQ5H8A3 153 aa8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 TMEM268Q5VZI3 342 aa8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 Q6ZRM9 215 aa8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 CENPSQ8N2Z9 138 aa8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 ZNF502Q8TBZ5 544 aa8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 OR5B12Q96R08 314 aa8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 PDCD10Q9BUL8 212 aa8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 PLEKHA3Q9HB20 300 aa8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 TMED3Q9Y3Q3 217 aa8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 DNAH3Q8TD57 4116 aa8.12□□□□□ -1.11
POLR2J3-213ENST00000508848 FAM90A26D6RGX4 464 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 BMPR1BO00238 502 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 PLA2G10O15496 165 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 SFT2D2O95562 160 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 PRH1P02810 166 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 SULT1A3P0DMM9 295 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 SULT1A4P0DMN0 295 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 SNCAP37840 140 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 HTR2BP41595 481 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 SLURP1P55000 103 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 ELLP55199 621 aaPredicted RBP8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 RAB25P57735 213 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 RPEL1Q2QD12 228 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 FAM106AQ4KMX7 169 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 SLC25A24Q6NUK1 477 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 NOXA1Q86UR1 476 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 C1QL4Q86Z23 238 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 OR9G4Q8NGQ1 327 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 GPR146Q96CH1 333 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 WDR12Q9GZL7 423 aaKnown RBP8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 PEMTQ9UBM1 199 aa8.11□□□□□ -1.11
POLR2J3-213ENST00000508848 COL7A1Q02388 2944 aa8.1□□□□□ -1.11
POLR2J3-213ENST00000508848 A0A0G2JRQ6 117 aa8.1□□□□□ -1.11
POLR2J3-213ENST00000508848 ANKRD34BA5PLL1 514 aa8.1□□□□□ -1.11
POLR2J3-213ENST00000508848 I3L2K1 104 aa8.1□□□□□ -1.11
POLR2J3-213ENST00000508848 K7EIM0 57 aa8.1□□□□□ -1.11
POLR2J3-213ENST00000508848 LYRM1O43325 122 aa8.1□□□□□ -1.11
POLR2J3-213ENST00000508848 PITX3O75364 302 aa8.1□□□□□ -1.11
POLR2J3-213ENST00000508848 IFNA17P01571 189 aa8.1□□□□□ -1.11
POLR2J3-213ENST00000508848 CLEC3BP05452 202 aa8.1□□□□□ -1.11
POLR2J3-213ENST00000508848 BTCP35070 178 aa8.1□□□□□ -1.11
POLR2J3-213ENST00000508848 MFAP2P55001 183 aa8.1□□□□□ -1.11
POLR2J3-213ENST00000508848 ZNF846Q147U1 533 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms