RNA–Protein interactions for RNA: ENST00000505705.1

LIMCH1-206, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 437 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-206ENST00000505705 CTRB1P17538 263 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 PSMB8P28062 276 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 NKX2-1P43699 371 aaPredicted RBP6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 KRTAP10-3P60369 221 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 CFHR3Q02985 330 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 WT1-ASQ06250 92 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 OXA1LQ15070 435 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 CTRB2Q6GPI1 263 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 OR1L6Q8NGR2 347 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 DTD1Q8TEA8 209 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 CITED1Q99966 193 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 KLK15Q9H2R5 256 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 RBKSQ9H477 322 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 ZFP57Q9NU63 452 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 PAIP2BQ9ULR5 123 aaKnown RBP6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 ALG5Q9Y673 324 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 JMJD1CQ15652 2540 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 IGLC7A0M8Q6 106 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 FAM90A26D6RGX4 464 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 SOX15O60248 233 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 OR2J3O76001 311 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 IFNA10P01566 189 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 IGLV1-40P01703 118 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 IGHV3-11P01762 117 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 CRYGCP07315 174 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 IAPPP10997 89 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 RPL23AP62750 156 aaKnown RBP6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 RPP30P78346 268 aaKnown RBP6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 CD83Q01151 205 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 DEFA5Q01523 94 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 ATP5G2Q06055 141 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 TNFRSF9Q07011 255 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 C19orf54Q5BKX5 351 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 C19orf35Q6ZS72 473 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 NDUFA11Q86Y39 141 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 OR2C3Q8N628 320 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 ZBTB8BQ8NAP8 495 aaPredicted RBP6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 KLHL30-AS1Q8NEE0 82 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 SPATA3Q8NHX4 192 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 PINX1Q96BK5 328 aaKnown RBP6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 MISP3Q96FF7 219 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 USMG5Q96IX5 58 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 OR10C1Q96KK4 312 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 C2orf50Q96LR7 162 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 OR5B12Q96R08 314 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 MAGT1Q9H0U3 335 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 MED28Q9H204 178 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 HSPB7Q9UBY9 170 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 FBXL7Q9UJT9 491 aa6.41□□□□□ -1.38
LIMCH1-206ENST00000505705 FAM223BA6NKX1 122 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 J3QL48 77 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 L7N2F9 121 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 M0QZ24 198 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 SYNGR2O43760 224 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 PITX3O75364 302 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 SIX6O95475 246 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 HTR2BP41595 481 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 S100A10P60903 97 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 POLR2GP62487 172 aaKnown RBP eCLIP6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 VAMP2P63027 116 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 RHOGP84095 191 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 C2orf68Q2NKX9 166 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 C15orf32Q32M92 178 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 TCTEX1D4Q5JR98 221 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 NOXA1Q86UR1 476 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 FAM223AQ8IWN6 122 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 ZNF491Q8N8L2 437 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 NECAP1Q8NC96 275 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 OR4D5Q8NGN0 318 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 OR1P1Q8NH06 330 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 WIPF2Q8TF74 440 aaPredicted RBP6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 EEF1AKMT3Q96AZ1 226 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 UBE2E2Q96LR5 201 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 CIB3Q96Q77 187 aaPredicted RBP6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 P2RX4Q99571 388 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 MGAT4CQ9UBM8 478 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 LSM5Q9Y4Y9 91 aaKnown RBP6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 F11RQ9Y624 299 aaKnown RBP6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 U3KQ87 197 aa6.4□□□□□ -1.38
LIMCH1-206ENST00000505705 SETD2Q9BYW2 2564 aaPredicted RBP6.4□□□□□ -1.39
LIMCH1-206ENST00000505705 NF1P21359 2839 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 IGHV3-21A0A0B4J1V1 117 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 C7orf66A4D0T2 115 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 ANKRD34BA5PLL1 514 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 CORTO00230 105 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 SSSCA1O60232 199 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 NDUFB8O95169 186 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 LY86O95711 162 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 IGHV3-23P01764 117 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 PF4P02776 101 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 RLN2P04090 185 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 IFNA4P05014 189 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 PVALBP20472 110 aaPredicted RBP6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 CDX1P47902 265 aaPredicted RBP6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 BCAP31P51572 246 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 RAB11AP62491 216 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 CYCSP99999 105 aaKnown RBP6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 AARDQ4LEZ3 155 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 PDLIM3Q53GG5 364 aaPredicted RBP6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 SPANXN5Q5MJ07 72 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms