RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 KLK11Q9UBX7 282 aa16.91■□□□□ 0.3
CDC42SE2-207ENST00000504701 UBQLN2Q9UHD9 624 aa16.91■□□□□ 0.3
CDC42SE2-207ENST00000504701 FAM25AB3EWG3 89 aa16.9■□□□□ 0.3
CDC42SE2-207ENST00000504701 FAM25CB3EWG5 89 aa16.9■□□□□ 0.3
CDC42SE2-207ENST00000504701 FAM25GB3EWG6 89 aa16.9■□□□□ 0.3
CDC42SE2-207ENST00000504701 IGHV3-48P01763 117 aa16.9■□□□□ 0.3
CDC42SE2-207ENST00000504701 SPINK9Q5DT21 86 aa16.9■□□□□ 0.3
CDC42SE2-207ENST00000504701 CMTM3Q96MX0 182 aa16.9■□□□□ 0.3
CDC42SE2-207ENST00000504701 MRPL27Q9P0M9 148 aaKnown RBP16.9■□□□□ 0.3
CDC42SE2-207ENST00000504701 PRNDQ9UKY0 176 aa16.9■□□□□ 0.3
CDC42SE2-207ENST00000504701 UFC1Q9Y3C8 167 aa16.9■□□□□ 0.3
CDC42SE2-207ENST00000504701 RORCP51449 518 aa16.89■□□□□ 0.29
CDC42SE2-207ENST00000504701 HSD17B13Q7Z5P4 300 aaPredicted RBP16.89■□□□□ 0.29
CDC42SE2-207ENST00000504701 OR4D10Q8NGI6 311 aa16.89■□□□□ 0.29
CDC42SE2-207ENST00000504701 OR52I2Q8NH67 350 aa16.89■□□□□ 0.29
CDC42SE2-207ENST00000504701 BSCL2Q96G97 398 aaPredicted RBP16.89■□□□□ 0.29
CDC42SE2-207ENST00000504701 C20orf24Q9BUV8 137 aa16.89■□□□□ 0.29
CDC42SE2-207ENST00000504701 GABARAPO95166 117 aa16.88■□□□□ 0.29
CDC42SE2-207ENST00000504701 ELLP55199 621 aaPredicted RBP16.88■□□□□ 0.29
CDC42SE2-207ENST00000504701 UCP3P55916 312 aa16.88■□□□□ 0.29
CDC42SE2-207ENST00000504701 Q56UQ5 140 aa16.88■□□□□ 0.29
CDC42SE2-207ENST00000504701 GPR107Q5VW38 600 aa16.88■□□□□ 0.29
CDC42SE2-207ENST00000504701 RBPMS2Q6ZRY4 209 aaKnown RBP16.88■□□□□ 0.29
CDC42SE2-207ENST00000504701 SLC38A6Q8IZM9 456 aa16.88■□□□□ 0.29
CDC42SE2-207ENST00000504701 CADM3Q8N126 398 aa16.88■□□□□ 0.29
CDC42SE2-207ENST00000504701 OR1L6Q8NGR2 347 aa16.88■□□□□ 0.29
CDC42SE2-207ENST00000504701 OR5B3Q8NH48 314 aa16.88■□□□□ 0.29
CDC42SE2-207ENST00000504701 MARC2Q969Z3 335 aa16.88■□□□□ 0.29
CDC42SE2-207ENST00000504701 HYDINQ4G0P3 5121 aa16.87■□□□□ 0.29
CDC42SE2-207ENST00000504701 CD3DP04234 171 aa16.87■□□□□ 0.29
CDC42SE2-207ENST00000504701 MISP3Q96FF7 219 aa16.87■□□□□ 0.29
CDC42SE2-207ENST00000504701 TMEM56Q96MV1 263 aa16.87■□□□□ 0.29
CDC42SE2-207ENST00000504701 ABHD1Q96SE0 405 aa16.87■□□□□ 0.29
CDC42SE2-207ENST00000504701 EXTL2Q9UBQ6 330 aa16.87■□□□□ 0.29
CDC42SE2-207ENST00000504701 I3L2K1 104 aa16.86■□□□□ 0.29
CDC42SE2-207ENST00000504701 CYB5BO43169 146 aa16.86■□□□□ 0.29
CDC42SE2-207ENST00000504701 PGAM2P15259 253 aa16.86■□□□□ 0.29
CDC42SE2-207ENST00000504701 LPCAT3Q6P1A2 487 aa16.86■□□□□ 0.29
CDC42SE2-207ENST00000504701 H2BFWTQ7Z2G1 175 aa16.86■□□□□ 0.29
CDC42SE2-207ENST00000504701 LHFPL1Q86WI0 220 aa16.86■□□□□ 0.29
CDC42SE2-207ENST00000504701 OR2C3Q8N628 320 aa16.86■□□□□ 0.29
CDC42SE2-207ENST00000504701 TP53RKQ96S44 253 aa16.86■□□□□ 0.29
CDC42SE2-207ENST00000504701 OVOL2Q9BRP0 275 aa16.86■□□□□ 0.29
CDC42SE2-207ENST00000504701 GGTLC1Q9BX51 225 aa16.86■□□□□ 0.29
CDC42SE2-207ENST00000504701 C5orf66Q9H5L9 145 aa16.86■□□□□ 0.29
CDC42SE2-207ENST00000504701 DAZ1Q9NQZ3 744 aaKnown RBP16.86■□□□□ 0.29
CDC42SE2-207ENST00000504701 IGHV3-49A0A0A0MS15 119 aa16.85■□□□□ 0.29
CDC42SE2-207ENST00000504701 TRAV25A0A0B4J276 109 aa16.85■□□□□ 0.29
CDC42SE2-207ENST00000504701 NDUFA4O00483 81 aa16.85■□□□□ 0.29
CDC42SE2-207ENST00000504701 IGKV1-5P01602 117 aa16.85■□□□□ 0.29
CDC42SE2-207ENST00000504701 CTSGP08311 255 aa16.85■□□□□ 0.29
CDC42SE2-207ENST00000504701 PPP5CP53041 499 aa16.85■□□□□ 0.29
CDC42SE2-207ENST00000504701 OR1P1Q8NH06 330 aa16.85■□□□□ 0.29
CDC42SE2-207ENST00000504701 OR4A16Q8NH70 328 aa16.85■□□□□ 0.29
CDC42SE2-207ENST00000504701 TSC22D3Q99576 134 aa16.85■□□□□ 0.29
CDC42SE2-207ENST00000504701 MIXL1Q9H2W2 232 aa16.85■□□□□ 0.29
CDC42SE2-207ENST00000504701 FAM212BQ9NTI7 297 aaPredicted RBP16.85■□□□□ 0.29
CDC42SE2-207ENST00000504701 FKBP11Q9NYL4 201 aa16.85■□□□□ 0.29
CDC42SE2-207ENST00000504701 LOC102724200A0A096LPH7 203 aaPredicted RBP16.84■□□□□ 0.29
CDC42SE2-207ENST00000504701 S100GP29377 79 aa16.84■□□□□ 0.29
CDC42SE2-207ENST00000504701 PRCDQ00LT1 54 aa16.84■□□□□ 0.29
CDC42SE2-207ENST00000504701 ODF3L2Q3SX64 289 aa16.84■□□□□ 0.29
CDC42SE2-207ENST00000504701 MZT2AQ6P582 158 aa16.84■□□□□ 0.29
CDC42SE2-207ENST00000504701 SPSB3Q6PJ21 355 aa16.84■□□□□ 0.29
CDC42SE2-207ENST00000504701 PLECQ15149 4684 aaKnown RBP16.84■□□□□ 0.29
CDC42SE2-207ENST00000504701 MT-CO2P00403 227 aa16.83■□□□□ 0.28
CDC42SE2-207ENST00000504701 ZNF182P17025 639 aaPredicted RBP16.83■□□□□ 0.28
CDC42SE2-207ENST00000504701 PIGPP57054 158 aa16.83■□□□□ 0.28
CDC42SE2-207ENST00000504701 ANKRD55Q3KP44 614 aa16.83■□□□□ 0.28
CDC42SE2-207ENST00000504701 RNASE10Q5GAN6 216 aaKnown RBP16.83■□□□□ 0.28
CDC42SE2-207ENST00000504701 PINX1Q96BK5 328 aaKnown RBP16.83■□□□□ 0.28
CDC42SE2-207ENST00000504701 MTFP1Q9UDX5 166 aa16.83■□□□□ 0.28
CDC42SE2-207ENST00000504701 TSPAN4O14817 238 aa16.82■□□□□ 0.28
CDC42SE2-207ENST00000504701 CTSDP07339 412 aaPredicted RBP16.82■□□□□ 0.28
CDC42SE2-207ENST00000504701 P0C879 139 aa16.82■□□□□ 0.28
CDC42SE2-207ENST00000504701 RND3P61587 244 aa16.82■□□□□ 0.28
CDC42SE2-207ENST00000504701 SP6Q3SY56 376 aa16.82■□□□□ 0.28
CDC42SE2-207ENST00000504701 FAAP20Q6NZ36 180 aa16.82■□□□□ 0.28
CDC42SE2-207ENST00000504701 SPAG8Q99932 426 aaPredicted RBP16.82■□□□□ 0.28
CDC42SE2-207ENST00000504701 IGHV3OR16-13A0A075B7E8 117 aa16.81■□□□□ 0.28
CDC42SE2-207ENST00000504701 IGHV3-74A0A0B4J1X5 117 aa16.81■□□□□ 0.28
CDC42SE2-207ENST00000504701 A0A0B4J293 547 aa16.81■□□□□ 0.28
CDC42SE2-207ENST00000504701 A0A0G2JRQ6 117 aa16.81■□□□□ 0.28
CDC42SE2-207ENST00000504701 HSPE1P61604 102 aaKnown RBP16.81■□□□□ 0.28
CDC42SE2-207ENST00000504701 EWSR1Q01844 656 aaKnown RBP eCLIP16.81■□□□□ 0.28
CDC42SE2-207ENST00000504701 SPCS2Q15005 226 aa16.81■□□□□ 0.28
CDC42SE2-207ENST00000504701 ZNF124Q15973 351 aa16.81■□□□□ 0.28
CDC42SE2-207ENST00000504701 ZNF114Q8NC26 417 aa16.81■□□□□ 0.28
CDC42SE2-207ENST00000504701 RNF2Q99496 336 aa16.81■□□□□ 0.28
CDC42SE2-207ENST00000504701 OR13C8Q8NGS7 320 aa16.8■□□□□ 0.28
CDC42SE2-207ENST00000504701 AP3S1Q92572 193 aa16.8■□□□□ 0.28
CDC42SE2-207ENST00000504701 ATP6V0BQ99437 205 aa16.8■□□□□ 0.28
CDC42SE2-207ENST00000504701 SMPXQ9UHP9 88 aa16.8■□□□□ 0.28
CDC42SE2-207ENST00000504701 ALMS1Q8TCU4 4167 aa16.8■□□□□ 0.28
CDC42SE2-207ENST00000504701 IGKV3-7A0A075B6H7 116 aa16.79■□□□□ 0.28
CDC42SE2-207ENST00000504701 K7EMT4 169 aa16.79■□□□□ 0.28
CDC42SE2-207ENST00000504701 CTDSP2O14595 271 aa16.79■□□□□ 0.28
CDC42SE2-207ENST00000504701 ST8SIA3O43173 380 aa16.79■□□□□ 0.28
CDC42SE2-207ENST00000504701 YIF1AO95070 293 aa16.79■□□□□ 0.28
CDC42SE2-207ENST00000504701 MFAP4P55083 255 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms