RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 Q6ZSR3 168 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 ZNF645Q8N7E2 425 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 OR13A1Q8NGR1 328 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 RAB37Q96AX2 223 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 WDR54Q9H977 334 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 B4GALT7Q9UBV7 327 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 U3KQA8 63 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 NAV3Q8IVL0 2385 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 CRYABP02511 175 aaKnown RBP6.31□□□□□ -1.4
NEDD9-208ENST00000504387 STAG3L2P0CL84 134 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 STAG3L3P0CL85 134 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 NPY1RP25929 384 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 FXYD7P58549 80 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 C6orf15Q6UXA7 325 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-208ENST00000504387 ZNF497Q6ZNH5 498 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 OR52E5Q8NH55 327 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 PRDM14Q9GZV8 571 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 ZNRD1Q9P1U0 126 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 SSUH2Q9Y2M2 353 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 IGHV3OR15-7A0A075B7D8 119 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 RNF212BA8MTL3 300 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 PPIAL4DF5H284 164 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.3□□□□□ -1.4
NEDD9-208ENST00000504387 CD46P15529 392 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 CDKN1BP46527 198 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 GPR12P47775 334 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 B3GALT5-AS1P59052 145 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 RPL19P84098 196 aaKnown RBP6.3□□□□□ -1.4
NEDD9-208ENST00000504387 TCF24Q7RTU0 167 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 PPP1R32Q7Z5V6 425 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 MEGF9Q9H1U4 602 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 FNDC4Q9H6D8 234 aaPredicted RBP6.3□□□□□ -1.4
NEDD9-208ENST00000504387 DUSP13Q9UII6 198 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 KMT2EQ8IZD2 1858 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 OR4C46A6NHA9 309 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 DKK1O94907 266 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 GNG5P63218 68 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 FOXF2Q12947 444 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 TM4SF20Q53R12 229 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 MORN5Q5VZ52 161 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 MDP1Q86V88 176 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 OR8B3Q8NGG8 313 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 C18orf32Q8TCD1 76 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 BLNKQ8WV28 456 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 KCNE4Q8WWG9 221 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 HILPDAQ9Y5L2 63 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 WNK2Q9Y3S1 2297 aa6.3□□□□□ -1.4
NEDD9-208ENST00000504387 ZNF207O43670 478 aaKnown RBP6.29□□□□□ -1.4
NEDD9-208ENST00000504387 PYYP10082 97 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 Q0VG73 95 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 VWC2Q2TAL6 325 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 OCIAD2Q56VL3 154 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 Q6ZS49 121 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 SPSB4Q96A44 273 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 SARAFQ96BY9 339 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 TPPP3Q9BW30 176 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 SF3B5Q9BWJ5 86 aaKnown RBP6.29□□□□□ -1.4
NEDD9-208ENST00000504387 ZNF391Q9UJN7 358 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 ADGRG4Q8IZF6 3080 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 TET2Q6N021 2002 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-208ENST00000504387 COL4A2P08572 1712 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 MED13LQ71F56 2210 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 DMXL1Q9Y485 3027 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 IGHV3-21A0A0B4J1V1 117 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 FAM90A10PA6NDY2 464 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 FAM90A18PA6NE21 464 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 FAM181BA6NEQ2 426 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 FAM90A16PA6NEW6 464 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 FAM90A20PA6NIJ5 464 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 FAM90A8PA6NJQ4 464 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 FAM90A7PA6NKC0 464 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 FAM90A22PA8MWA6 464 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 FAM90A12PA8MX19 464 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 FAM90A5PA8MXJ8 464 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 FAM90A23PA8MXZ1 464 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 J3QT63 122 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 FAM90A15PP0C7V4 464 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 FAM90A13PP0C7W8 464 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 FAM90A14PP0C7W9 464 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 FAM90A24PP0C7X0 464 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 RHOBP62745 196 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 FAM201AQ5SY85 155 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 GDF5OSQ5U4N7 250 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 Q8NFD4 153 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 OR5B3Q8NH48 314 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 POM121L2Q96KW2 1035 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 SFXN3Q9BWM7 321 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 ARRDC1-AS1Q9H2J1 176 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 ABI3Q9P2A4 366 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 TRAV9-2A0A087WT02 112 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 TRAV8-6A0A0B4J262 113 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 A0A1W2PRD5 423 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 A0A1W2PRF3 423 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 A0A1W2PRM7 423 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 KLK10O43240 276 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 UBE2G1P62253 170 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 CX3CL1P78423 397 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 ZNF718Q3SXZ3 478 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 DHRS13Q6UX07 377 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 SPACA3Q8IXA5 215 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms