RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 SLC25A38Q96DW6 304 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 ZNF414Q96IQ9 312 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 CMTM3Q96MX0 182 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 CHRDL1Q9BU40 450 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 NXF2Q9GZY0 626 aaKnown RBP4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 VSIRQ9H7M9 311 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 RRP15Q9Y3B9 282 aaKnown RBP4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 S4R3C0 116 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 VPS13DQ5THJ4 4388 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 HERC2O95714 4834 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 TRAV18A0A075B6X5 111 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 TRAV14DV4A0A0A6YYC5 116 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 OR2T8A6NH00 312 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 C15orf61A6NNL5 157 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 I3L2K1 104 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 GPR31O00270 319 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 NUPL2O15504 423 aaKnown RBP4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 TNFSF12O43508 249 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 PGLYRP1O75594 196 aaPredicted RBP4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 SNAPC5O75971 98 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 S1PR2O95136 353 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 CTSDP07339 412 aaPredicted RBP4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 RPA2P15927 270 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 MFAP4P55083 255 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 UCP3P55916 312 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 TAS2R46P59540 309 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 HERV-K104P61576 105 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 PAFAH1B2P68402 229 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 PMS2P11Q13670 270 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 AADACL3Q5VUY0 350 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 TMEM116Q8NCL8 245 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 OR5H6Q8NGV6 325 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 C11orf45Q8TAV5 145 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 FCAMRQ8WWV6 532 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 S100A16Q96FQ6 103 aaKnown RBP4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 CNBD2Q96M20 576 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 RNF2Q99496 336 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 RARRES2Q99969 163 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 GINS3Q9BRX5 216 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 RHPN1-AS1Q9BWJ2 59 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 OR51B2Q9Y5P1 312 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 DNAH10Q8IVF4 4471 aa4.48□□□□□ -1.69
LSM3P4-201ENST00000502948 DNAH6Q9C0G6 4158 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 CORTO00230 105 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 KRASP01116 189 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 IFNA4P05014 189 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 PSMB9P28065 219 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 S100GP29377 79 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 LPAR6P43657 344 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 HSPE1P61604 102 aaKnown RBP4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 PRCDQ00LT1 54 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 RBMS2Q15434 407 aaKnown RBP4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 KCTD21Q4G0X4 260 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 UBE2NLQ5JXB2 153 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 RPP25LQ8N5L8 163 aaKnown RBP4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 DUSP18Q8NEJ0 188 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 OR6F1Q8NGZ6 308 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 OR51H1Q8NH63 302 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 C2CD4CQ8TF44 421 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 GRAMD2BQ96HH9 432 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 SEC22AQ96IW7 307 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 GPHA2Q96T91 129 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 KRTAP17-1Q9BYP8 105 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 TMEM231Q9H6L2 316 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 SEPSECSQ9HD40 501 aaKnown RBP4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 EHFQ9NZC4 300 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 UBQLN2Q9UHD9 624 aa4.47□□□□□ -1.69
LSM3P4-201ENST00000502948 IGHV3-35A0A0C4DH35 117 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 A0A1W2PS18 150 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 ZNF705EA8MWA4 302 aaPredicted RBP4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 B3GALNT1O75752 331 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 RLN1P04808 185 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 SPP1P10451 314 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 PTHLHP12272 177 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 MIFP14174 115 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 RPL5P46777 297 aaKnown RBP4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 NPBWR1P48145 328 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 FXYD4P59646 89 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 ERHP84090 104 aaKnown RBP4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 TMEM187Q14656 261 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 Q56UQ5 140 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 IDNKQ5T6J7 187 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 MORN3Q6PF18 240 aaPredicted RBP4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 LINC00336Q6ZUF6 198 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 TMEM17Q86X19 198 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 LYSMD2Q8IV50 215 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 TSPAN14Q8NG11 270 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 OR11H2Q8NH07 326 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 GPX8Q8TED1 209 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 ZNF486Q96H40 463 aaPredicted RBP4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 ZNF2Q9BSG1 426 aaPredicted RBP4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 C20orf24Q9BUV8 137 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 Q9H521 79 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 SCPEP1Q9HB40 452 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 APLNQ9ULZ1 77 aa4.46□□□□□ -1.7
LSM3P4-201ENST00000502948 HECTD4Q9Y4D8 3996 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 TRAV30A0A087WSZ9 112 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 SMIM30A4D0T7 59 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 DBX1A6NMT0 343 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 GNG7O60262 68 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms