RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 HHLA2Q9UM44 414 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 CFAP46Q8IYW2 2715 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 KMT2EQ8IZD2 1858 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 A0A1B0GV72 72 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 SNURFLB1AK76 121 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 H0YJW9 148 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 K7EN84 100 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 FCN1O00602 326 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 NKX2-8O15522 239 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 NDUFB4O95168 129 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 FAM87AP0C7U9 286 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 ZNF728P0DKX0 622 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 IAPPP10997 89 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 SLC25A6P12236 298 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 DUSP1P28562 367 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 CAMPP49913 170 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 YPEL3P61236 119 aaPredicted RBP4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 Q6ZRM9 215 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 TCF24Q7RTU0 167 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 PNKDQ8N490 385 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 OR51T1Q8NGJ9 327 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 OR10G8Q8NGN5 311 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 TMEM59Q9BXS4 323 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 PSG11Q9UQ72 335 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 ZNF835Q9Y2P0 537 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 CREBBPQ92793 2442 aa4.82□□□□□ -1.64
SOX2-OT-218ENST00000498731 DUXBA0A1W2PPF3 345 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 GAGE10A6NGK3 116 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 FOXI3A8MTJ6 420 aaPredicted RBP4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 RNF212BA8MTL3 300 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 H3BUT2 72 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 RAMP3O60896 148 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 CNIH1O95406 144 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 IGFBP2P18065 325 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 PTGDSP41222 190 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 RPL24P83731 157 aaKnown RBP4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 Q0VFX4 171 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 OR1C1Q15619 314 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 SIGLEC15Q6ZMC9 328 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 OR2AE1Q8NHA4 323 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 LHX4Q969G2 390 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 OXGR1Q96P68 337 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 FBLN5Q9UBX5 448 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 PSG8Q9UQ74 426 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 RAXQ9Y2V3 346 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 LSM4Q9Y4Z0 139 aaKnown RBP4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 CPAMD8Q8IZJ3 1885 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 C7orf71A4D174 169 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 FAM90A27PA6NNH2 459 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 LIFP15018 202 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 MDH2P40926 338 aaKnown RBP4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 MAGEA5P43359 124 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 TCL1AP56279 114 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 DSCR4P56555 118 aaPredicted RBP4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 TNXAQ16473 311 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 RNF183Q96D59 192 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 GPX7Q96SL4 187 aaPredicted RBP4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 SIGMAR1Q99720 223 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 NPFFR1Q9GZQ6 430 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 PNRC2Q9NPJ4 139 aaKnown RBP4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 FREM1Q5H8C1 2179 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 DOCK10Q96BY6 2186 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 IGLV1-36A0A0B4J1U3 117 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 TRAV1-1A0A0B4J248 108 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 IGHV3-64DA0A0J9YX35 117 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 PINLYPA6NC86 204 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 TNFRSF13BO14836 293 aaPredicted RBP4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 SERPINE2P07093 398 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 CD40P25942 277 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 SRP14P37108 136 aaKnown RBP4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 ARF6P62330 175 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 OR10D3Q8NH80 312 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 MBD3L1Q8WWY6 194 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 DDB2Q92466 427 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 ZNF837Q96EG3 531 aaPredicted RBP4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 SERTAD4Q9NUC0 356 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 PEMTQ9UBM1 199 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 B4GALT7Q9UBV7 327 aa4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 BOKQ9UMX3 212 aaPredicted RBP4.81□□□□□ -1.64
SOX2-OT-218ENST00000498731 ANGPTL7O43827 346 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 SRIP30626 198 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 ZNF121P58317 390 aaPredicted RBP4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 KIR3DS1Q14943 382 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 C5orf64Q2M2E5 130 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 DEFB109BQ30KR1 87 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 SLC22A24Q8N4F4 322 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 SPSB1Q96BD6 273 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 TAAR6Q96RI8 345 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 RAB40CQ96S21 281 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 DEPPQ9NTK1 212 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 A0A1W2PNU3 283 aaPredicted RBP4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 HSPB2A8KAH6 182 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 TRAF3IP2O43734 574 aaPredicted RBP4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 ZIC3O60481 467 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 ZNF324O75467 553 aaPredicted RBP4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 CA1P00915 261 aaPredicted RBP4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 GNRHRP30968 328 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 HSPB2Q16082 182 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 STUMQ69YW2 141 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms