RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 ST8SIA2Q92186 375 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 KRTAP4-8Q9BYQ9 185 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 MS4A6AQ9H2W1 248 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 PLCXD1Q9NUJ7 323 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 TMEM140Q9NV12 185 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 NSG2Q9Y328 171 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 LSM2Q9Y333 95 aaKnown RBP6.58□□□□□ -1.36
CCDC171-209ENST00000498725 X6R8D5 127 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 TRAV14DV4A0A0A6YYC5 116 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 SMIM30A4D0T7 59 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 METTL21EPA6NDL7 271 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 K7EIM0 57 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 DFFBO76075 338 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 APOHP02749 345 aaPredicted RBP6.57□□□□□ -1.36
CCDC171-209ENST00000498725 FCER2P06734 321 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 CTSGP08311 255 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 GIG44P09565 113 aaPredicted RBP6.57□□□□□ -1.36
CCDC171-209ENST00000498725 CTXN2P0C2S0 81 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 C4BPBP20851 252 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 DTYMKP23919 212 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 FXYD4P59646 89 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 FABP5Q01469 135 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 RELQ04864 619 aaPredicted RBP6.57□□□□□ -1.36
CCDC171-209ENST00000498725 IRF3Q14653 427 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 SOHLH1Q5JUK2 328 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 FAM90A2PQ658T7 463 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 Q6ZS49 121 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 C10orf67Q8IYJ2 551 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 LILRB2Q8N423 598 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 OR51H1Q8NH63 302 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 MISP3Q96FF7 219 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 ZNF414Q96IQ9 312 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 AIFM2Q9BRQ8 373 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 CENPOQ9BU64 300 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 FKBP14Q9NWM8 211 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 TBC1D24Q9ULP9 559 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 F11RQ9Y624 299 aaKnown RBP6.57□□□□□ -1.36
CCDC171-209ENST00000498725 NACAE9PAV3 2078 aa6.57□□□□□ -1.36
CCDC171-209ENST00000498725 TMEM235A6NFC5 223 aa6.56□□□□□ -1.36
CCDC171-209ENST00000498725 NQO2P16083 231 aa6.56□□□□□ -1.36
CCDC171-209ENST00000498725 TAS2R31P59538 309 aa6.56□□□□□ -1.36
CCDC171-209ENST00000498725 C1orf134Q5TEV5 83 aa6.56□□□□□ -1.36
CCDC171-209ENST00000498725 CNIH2Q6PI25 160 aa6.56□□□□□ -1.36
CCDC171-209ENST00000498725 Q6ZRM9 215 aa6.56□□□□□ -1.36
CCDC171-209ENST00000498725 TRPT1Q86TN4 253 aaKnown RBP6.56□□□□□ -1.36
CCDC171-209ENST00000498725 Q8N3U1 123 aa6.56□□□□□ -1.36
CCDC171-209ENST00000498725 STXBP6Q8NFX7 210 aa6.56□□□□□ -1.36
CCDC171-209ENST00000498725 OR1L8Q8NGR8 309 aa6.56□□□□□ -1.36
CCDC171-209ENST00000498725 SLC25A46Q96AG3 418 aa6.56□□□□□ -1.36
CCDC171-209ENST00000498725 DGCR14Q96DF8 476 aaKnown RBP6.56□□□□□ -1.36
CCDC171-209ENST00000498725 SLC5A7Q9GZV3 580 aa6.56□□□□□ -1.36
CCDC171-209ENST00000498725 DNAH11Q96DT5 4516 aa6.56□□□□□ -1.36
CCDC171-209ENST00000498725 ZNF705EA8MWA4 302 aaPredicted RBP6.55□□□□□ -1.36
CCDC171-209ENST00000498725 HPRT1P00492 218 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 ZNF688P0C7X2 276 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 HTN3P15516 51 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 RAB6AP20340 208 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 NPY1RP25929 384 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 FCGR2CP31995 323 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 RANBP1P43487 201 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 EMP1P54849 157 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 MFAP4P55083 255 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 GNG2P59768 71 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 ARPC4P59998 168 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 TNP2Q05952 138 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 CATR1Q13166 79 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 SSX1Q16384 188 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 ACTL10Q5JWF8 245 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 UBE2UQ5VVX9 321 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 ZNF773Q6PK81 442 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 Q6ZR54 194 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 OR13F1Q8NGS4 319 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 PINX1Q96BK5 328 aaKnown RBP6.55□□□□□ -1.36
CCDC171-209ENST00000498725 OR10C1Q96KK4 312 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 SRSF8Q9BRL6 282 aaKnown RBP6.55□□□□□ -1.36
CCDC171-209ENST00000498725 SCRT2Q9NQ03 307 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 TMEM14BQ9NUH8 114 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 ANXA10Q9UJ72 324 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 OR51B2Q9Y5P1 312 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 HSPG2P98160 4391 aa6.55□□□□□ -1.36
CCDC171-209ENST00000498725 IFITM5A6NNB3 132 aa6.54□□□□□ -1.36
CCDC171-209ENST00000498725 PDCD5O14737 125 aa6.54□□□□□ -1.36
CCDC171-209ENST00000498725 SSX5O60225 188 aa6.54□□□□□ -1.36
CCDC171-209ENST00000498725 GNG7O60262 68 aa6.54□□□□□ -1.36
CCDC171-209ENST00000498725 CDK2AP2O75956 126 aa6.54□□□□□ -1.36
CCDC171-209ENST00000498725 SPP1P10451 314 aa6.54□□□□□ -1.36
CCDC171-209ENST00000498725 ERVK-16P61578 105 aa6.54□□□□□ -1.36
CCDC171-209ENST00000498725 TRAM1Q15629 374 aa6.54□□□□□ -1.36
CCDC171-209ENST00000498725 AADACL3Q5VUY0 350 aa6.54□□□□□ -1.36
CCDC171-209ENST00000498725 HACD4Q5VWC8 232 aa6.54□□□□□ -1.36
CCDC171-209ENST00000498725 MORN3Q6PF18 240 aaPredicted RBP6.54□□□□□ -1.36
CCDC171-209ENST00000498725 TMEM17Q86X19 198 aa6.54□□□□□ -1.36
CCDC171-209ENST00000498725 DUSP18Q8NEJ0 188 aa6.54□□□□□ -1.36
CCDC171-209ENST00000498725 LSM10Q969L4 123 aaKnown RBP6.54□□□□□ -1.36
CCDC171-209ENST00000498725 GINS3Q9BRX5 216 aa6.54□□□□□ -1.36
CCDC171-209ENST00000498725 CCDC90BQ9GZT6 254 aa6.54□□□□□ -1.36
CCDC171-209ENST00000498725 NXF2Q9GZY0 626 aaKnown RBP6.54□□□□□ -1.36
CCDC171-209ENST00000498725 DCSTAMPQ9H295 470 aa6.54□□□□□ -1.36
CCDC171-209ENST00000498725 NDUFA4L2Q9NRX3 87 aa6.54□□□□□ -1.36
CCDC171-209ENST00000498725 RBFOX2O43251 390 aaKnown RBP eCLIP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms