RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 ZNF474Q6S9Z5 364 aaPredicted RBP13.46□□□□□ -0.25
COL6A1-206ENST00000498614 MMD2Q8IY49 270 aa13.46□□□□□ -0.25
COL6A1-206ENST00000498614 EAF1Q96JC9 268 aaPredicted RBP13.46□□□□□ -0.25
COL6A1-206ENST00000498614 LPAR2Q9HBW0 351 aa13.46□□□□□ -0.25
COL6A1-206ENST00000498614 FBXL7Q9UJT9 491 aa13.46□□□□□ -0.25
COL6A1-206ENST00000498614 MGST3O14880 152 aa13.45□□□□□ -0.26
COL6A1-206ENST00000498614 ZNF134P52741 427 aa13.45□□□□□ -0.26
COL6A1-206ENST00000498614 RELBQ01201 579 aa13.45□□□□□ -0.26
COL6A1-206ENST00000498614 Q0VG73 95 aa13.45□□□□□ -0.26
COL6A1-206ENST00000498614 ARSJQ5FYB0 599 aaPredicted RBP13.45□□□□□ -0.26
COL6A1-206ENST00000498614 UTF1Q5T230 341 aa13.45□□□□□ -0.26
COL6A1-206ENST00000498614 OR8I2Q8N0Y5 310 aa13.45□□□□□ -0.26
COL6A1-206ENST00000498614 C11orf52Q96A22 123 aa13.45□□□□□ -0.26
COL6A1-206ENST00000498614 V9GYV3 84 aa13.45□□□□□ -0.26
COL6A1-206ENST00000498614 ITPR1Q14643 2758 aa13.45□□□□□ -0.26
COL6A1-206ENST00000498614 ACACBO00763 2458 aa13.45□□□□□ -0.26
COL6A1-206ENST00000498614 RPEL1Q2QD12 228 aa13.45□□□□□ -0.26
COL6A1-206ENST00000498614 STPG3Q8N7X2 389 aa13.45□□□□□ -0.26
COL6A1-206ENST00000498614 ST6GALNAC3Q8NDV1 305 aa13.45□□□□□ -0.26
COL6A1-206ENST00000498614 LEAP2Q969E1 77 aa13.45□□□□□ -0.26
COL6A1-206ENST00000498614 RBM14Q96PK6 669 aaKnown RBP13.45□□□□□ -0.26
COL6A1-206ENST00000498614 FAM103A1Q9BTL3 118 aaKnown RBP13.45□□□□□ -0.26
COL6A1-206ENST00000498614 GNB4Q9HAV0 340 aa13.45□□□□□ -0.26
COL6A1-206ENST00000498614 JPT1Q9UK76 154 aa13.45□□□□□ -0.26
COL6A1-206ENST00000498614 TRGV10A0A0A0MS01 117 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 FAM90A9PA6NNJ1 464 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 A8MXE2 369 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 C9JCJ5 164 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 C1orf174Q8IYL3 243 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 OR52E5Q8NH55 327 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 ITLN1Q8WWA0 313 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 NPVFQ9HCQ7 196 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 FAM215AQ9Y5M1 114 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 SPINK4O60575 86 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 KLF3P57682 345 aaPredicted RBP13.44□□□□□ -0.26
COL6A1-206ENST00000498614 LOXL3P58215 753 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 RHOBP62745 196 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 GAGE1Q13065 139 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 IGFL3Q6UXB1 125 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 FAM90A1Q86YD7 464 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 FAM169BQ8N8A8 192 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 Q8N976 141 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 OR4P4Q8NGL7 312 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 PPP1R35Q8TAP8 253 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 TMEM140Q9NV12 185 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 TCF19Q9Y242 345 aa13.44□□□□□ -0.26
COL6A1-206ENST00000498614 TET2Q6N021 2002 aaPredicted RBP13.43□□□□□ -0.26
COL6A1-206ENST00000498614 KRTDAPP60985 99 aa13.43□□□□□ -0.26
COL6A1-206ENST00000498614 ERVK-16P61578 105 aa13.43□□□□□ -0.26
COL6A1-206ENST00000498614 SIGLECL1Q8N7X8 197 aa13.43□□□□□ -0.26
COL6A1-206ENST00000498614 IFI27L2Q9H2X8 130 aa13.43□□□□□ -0.26
COL6A1-206ENST00000498614 RP1L1Q8IWN7 2480 aaPredicted RBP13.43□□□□□ -0.26
COL6A1-206ENST00000498614 TIMM23BQ5SRD1 257 aa13.43□□□□□ -0.26
COL6A1-206ENST00000498614 Q6ZS92 163 aa13.43□□□□□ -0.26
COL6A1-206ENST00000498614 C1orf229Q6ZS94 237 aaPredicted RBP13.43□□□□□ -0.26
COL6A1-206ENST00000498614 UHRF2Q96PU4 802 aa13.43□□□□□ -0.26
COL6A1-206ENST00000498614 SPTA1P02549 2419 aa13.42□□□□□ -0.26
COL6A1-206ENST00000498614 GPX1P07203 203 aa13.42□□□□□ -0.26
COL6A1-206ENST00000498614 TFPI2P48307 235 aa13.42□□□□□ -0.26
COL6A1-206ENST00000498614 KIAA1644Q3SXP7 199 aa13.42□□□□□ -0.26
COL6A1-206ENST00000498614 CENPWQ5EE01 88 aa13.42□□□□□ -0.26
COL6A1-206ENST00000498614 DUX4L9Q6RFH8 374 aaPredicted RBP13.42□□□□□ -0.26
COL6A1-206ENST00000498614 MIR17HGQ75NE6 70 aa13.42□□□□□ -0.26
COL6A1-206ENST00000498614 SFXN3Q9BWM7 321 aa13.42□□□□□ -0.26
COL6A1-206ENST00000498614 GNB1LQ9BYB4 327 aa13.42□□□□□ -0.26
COL6A1-206ENST00000498614 CALYQ9NYX4 217 aa13.42□□□□□ -0.26
COL6A1-206ENST00000498614 LY96Q9Y6Y9 160 aa13.42□□□□□ -0.26
COL6A1-206ENST00000498614 GLRXP35754 106 aa13.42□□□□□ -0.26
COL6A1-206ENST00000498614 CFHR2P36980 270 aa13.42□□□□□ -0.26
COL6A1-206ENST00000498614 TEPPQ6URK8 271 aa13.42□□□□□ -0.26
COL6A1-206ENST00000498614 ICE1Q9Y2F5 2266 aa13.41□□□□□ -0.26
COL6A1-206ENST00000498614 DSCAMO60469 2012 aa13.41□□□□□ -0.26
COL6A1-206ENST00000498614 F2RL2O00254 374 aa13.41□□□□□ -0.26
COL6A1-206ENST00000498614 ACTL6BO94805 426 aa13.41□□□□□ -0.26
COL6A1-206ENST00000498614 DOLPP1Q86YN1 238 aa13.41□□□□□ -0.26
COL6A1-206ENST00000498614 S1PR3Q99500 378 aa13.41□□□□□ -0.26
COL6A1-206ENST00000498614 RNASE7Q9H1E1 156 aaKnown RBP13.41□□□□□ -0.26
COL6A1-206ENST00000498614 DCAF16Q9NXF7 216 aa13.41□□□□□ -0.26
COL6A1-206ENST00000498614 NAT8BQ9UHF3 227 aa13.41□□□□□ -0.26
COL6A1-206ENST00000498614 TBL2Q9Y4P3 447 aaKnown RBP13.41□□□□□ -0.26
COL6A1-206ENST00000498614 DIRC3C9JPN6 131 aa13.4□□□□□ -0.26
COL6A1-206ENST00000498614 MT-CO2P00403 227 aa13.4□□□□□ -0.26
COL6A1-206ENST00000498614 IGFBP2P18065 325 aa13.4□□□□□ -0.26
COL6A1-206ENST00000498614 CRYBB3P26998 211 aa13.4□□□□□ -0.26
COL6A1-206ENST00000498614 SLC35B1P78383 322 aa13.4□□□□□ -0.26
COL6A1-206ENST00000498614 FXYD3Q14802 87 aa13.4□□□□□ -0.26
COL6A1-206ENST00000498614 CR1LQ2VPA4 569 aa13.4□□□□□ -0.26
COL6A1-206ENST00000498614 RCHY1Q96PM5 261 aa13.4□□□□□ -0.26
COL6A1-206ENST00000498614 PPP1R14DQ9NXH3 145 aa13.4□□□□□ -0.26
COL6A1-206ENST00000498614 ZNF586Q9NXT0 402 aa13.4□□□□□ -0.26
COL6A1-206ENST00000498614 KALRNO60229 2985 aa13.4□□□□□ -0.26
COL6A1-206ENST00000498614 PKD1L2Q7Z442 2459 aa13.4□□□□□ -0.26
COL6A1-206ENST00000498614 TRBV9A0A0B4J1U6 114 aa13.4□□□□□ -0.26
COL6A1-206ENST00000498614 LHBP01229 141 aa13.4□□□□□ -0.26
COL6A1-206ENST00000498614 GNG4P50150 75 aa13.4□□□□□ -0.26
COL6A1-206ENST00000498614 UCNP55089 124 aa13.4□□□□□ -0.26
COL6A1-206ENST00000498614 TCL1AP56279 114 aa13.4□□□□□ -0.26
COL6A1-206ENST00000498614 PQLC2Q6ZP29 291 aa13.4□□□□□ -0.26
COL6A1-206ENST00000498614 CA2P00918 260 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 MYOD1P15172 320 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms