RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 DERL1Q9BUN8 251 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 SOX21Q9Y651 276 aaPredicted RBP0.65□□□□□ -2.31
RBM39-242ENST00000498280 TTC21AQ8NDW8 1320 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 IGKV3-7A0A075B6H7 116 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 IGKV2-40A0A087WW87 121 aaPredicted RBP0.64□□□□□ -2.31
RBM39-242ENST00000498280 IRGMA1A4Y4 181 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 NIPSNAP2O75323 286 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 AHSA1O95433 338 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 IGKV1-5P01602 117 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 IGKV2D-40P01614 121 aaPredicted RBP0.64□□□□□ -2.31
RBM39-242ENST00000498280 NFYAP23511 347 aaPredicted RBP0.64□□□□□ -2.31
RBM39-242ENST00000498280 HIST1H2BOP23527 126 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 HIST1H2BBP33778 126 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 ZNF80P51504 273 aaPredicted RBP0.64□□□□□ -2.31
RBM39-242ENST00000498280 HIST1H2BDP58876 126 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 DEFA1P59665 94 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 HIST1H2BCP62807 126 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 HBA1P69905 142 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 RUNX1Q01196 453 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 KCNJ8Q15842 424 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 NDUFA5Q16718 116 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 HIST2H2BEQ16778 126 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.64□□□□□ -2.31
RBM39-242ENST00000498280 CCDC122Q5T0U0 273 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 BPIFA4PQ86YQ2 179 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 IQCF2Q8IXL9 164 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 C1orf158Q8N1D5 194 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 MRPL30Q8TCC3 161 aaKnown RBP0.64□□□□□ -2.31
RBM39-242ENST00000498280 RASSF5Q8WWW0 418 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 HIST1H2BHQ93079 126 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 TMEM106AQ96A25 262 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 PPP1R2P1Q96PQ5 205 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 HIST1H2BNQ99877 126 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 HIST1H2BMQ99879 126 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 NOSIPQ9Y314 301 aaKnown RBP0.64□□□□□ -2.31
RBM39-242ENST00000498280 SNAPC4Q5SXM2 1469 aa0.64□□□□□ -2.31
RBM39-242ENST00000498280 BAZ2BQ9UIF8 2168 aaKnown RBP0.64□□□□□ -2.31
RBM39-242ENST00000498280 CCDC88AQ3V6T2 1871 aa0.63□□□□□ -2.31
RBM39-242ENST00000498280 ADCY9O60503 1353 aa0.63□□□□□ -2.31
RBM39-242ENST00000498280 RTTNQ86VV8 2226 aa0.63□□□□□ -2.31
RBM39-242ENST00000498280 PSMD12O00232 456 aaPredicted RBP0.63□□□□□ -2.31
RBM39-242ENST00000498280 FAAHO00519 579 aa0.63□□□□□ -2.31
RBM39-242ENST00000498280 SHBGP04278 402 aa0.63□□□□□ -2.31
RBM39-242ENST00000498280 METTL15P1P0C7V9 234 aa0.63□□□□□ -2.31
RBM39-242ENST00000498280 HIST1H1TP22492 207 aaPredicted RBP0.63□□□□□ -2.31
RBM39-242ENST00000498280 ZNF846Q147U1 533 aa0.63□□□□□ -2.31
RBM39-242ENST00000498280 HIST3H3Q16695 136 aa0.63□□□□□ -2.31
RBM39-242ENST00000498280 PTRHD1Q6GMV3 140 aaKnown RBP0.63□□□□□ -2.31
RBM39-242ENST00000498280 LCN15Q6UWW0 184 aa0.63□□□□□ -2.31
RBM39-242ENST00000498280 DCXRQ7Z4W1 244 aa0.63□□□□□ -2.31
RBM39-242ENST00000498280 WFDC11Q8NEX6 87 aa0.63□□□□□ -2.31
RBM39-242ENST00000498280 C11orf40Q8WZ69 217 aa0.63□□□□□ -2.31
RBM39-242ENST00000498280 IMP4Q96G21 291 aaKnown RBP0.63□□□□□ -2.31
RBM39-242ENST00000498280 ARL5BQ96KC2 179 aa0.63□□□□□ -2.31
RBM39-242ENST00000498280 REG4Q9BYZ8 158 aa0.63□□□□□ -2.31
RBM39-242ENST00000498280 YIPF3Q9GZM5 350 aa0.63□□□□□ -2.31
RBM39-242ENST00000498280 C11orf68Q9H3H3 251 aaKnown RBP0.63□□□□□ -2.31
RBM39-242ENST00000498280 FREM1Q5H8C1 2179 aa0.63□□□□□ -2.31
RBM39-242ENST00000498280 MYOFQ9NZM1 2061 aa0.63□□□□□ -2.31
RBM39-242ENST00000498280 PCDH15Q96QU1 1955 aa0.63□□□□□ -2.31
RBM39-242ENST00000498280 HEATR5AQ86XA9 2040 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 MTUS2Q5JR59 1369 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 IGKV1D-42A0A075B6H8 117 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 M0R036 132 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 CHP2O43745 196 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 LYPLA2O95372 231 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 HLA-DRB1P01911 266 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 IFNA16P05015 189 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 CRYGAP11844 174 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 CD79AP11912 226 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 FKBP2P26885 142 aaKnown RBP0.62□□□□□ -2.31
RBM39-242ENST00000498280 G6PCP35575 357 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 RPL5P46777 297 aaKnown RBP0.62□□□□□ -2.31
RBM39-242ENST00000498280 SULT1A1P50225 295 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 RPS20P60866 119 aaKnown RBP0.62□□□□□ -2.31
RBM39-242ENST00000498280 SNRPD2P62316 118 aaKnown RBP0.62□□□□□ -2.31
RBM39-242ENST00000498280 ITGB3BPQ13352 177 aaPredicted RBP0.62□□□□□ -2.31
RBM39-242ENST00000498280 IMPG1Q17R60 797 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 ACOT6Q3I5F7 207 aaPredicted RBP0.62□□□□□ -2.31
RBM39-242ENST00000498280 C10orf55Q5SWW7 151 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 RPL22L1Q6P5R6 122 aaKnown RBP0.62□□□□□ -2.31
RBM39-242ENST00000498280 Q6ZQT0 140 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 AAED1Q7RTV5 226 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 CLVS1Q8IUQ0 354 aaPredicted RBP0.62□□□□□ -2.31
RBM39-242ENST00000498280 C20orf196Q8IYI0 205 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 LRRC25Q8N386 305 aaPredicted RBP0.62□□□□□ -2.31
RBM39-242ENST00000498280 ANKRD29Q8N6D5 301 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 PFN4Q8NHR9 129 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 MCFD2Q8NI22 146 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 MED9Q9NWA0 146 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 FBXL12Q9NXK8 326 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 STRCQ7RTU9 1775 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 WRNQ14191 1432 aaPredicted RBP eCLIP0.62□□□□□ -2.31
RBM39-242ENST00000498280 FLG2Q5D862 2391 aaPredicted RBP0.62□□□□□ -2.31
RBM39-242ENST00000498280 HECW2Q9P2P5 1572 aa0.62□□□□□ -2.31
RBM39-242ENST00000498280 HECW1Q76N89 1606 aa0.61□□□□□ -2.31
RBM39-242ENST00000498280 TRAV14DV4A0A0A6YYC5 116 aa0.61□□□□□ -2.31
RBM39-242ENST00000498280 DPRXA6NFQ7 191 aa0.61□□□□□ -2.31
RBM39-242ENST00000498280 HCRTO43612 131 aa0.61□□□□□ -2.31
RBM39-242ENST00000498280 RNASE3P12724 160 aaKnown RBP0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms