RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 CRYZL1O95825 349 aa1.15□□□□□ -2.23
PHC3-216ENST00000497171 PMP2P02689 132 aa1.15□□□□□ -2.23
PHC3-216ENST00000497171 C1QAP02745 245 aa1.15□□□□□ -2.23
PHC3-216ENST00000497171 RPSAP08865 295 aaKnown RBP1.15□□□□□ -2.23
PHC3-216ENST00000497171 RPL5P46777 297 aaKnown RBP1.15□□□□□ -2.23
PHC3-216ENST00000497171 MYL6P60660 151 aa1.15□□□□□ -2.23
PHC3-216ENST00000497171 KISS1Q15726 138 aa1.15□□□□□ -2.23
PHC3-216ENST00000497171 NNATQ16517 81 aa1.15□□□□□ -2.23
PHC3-216ENST00000497171 LPCAT3Q6P1A2 487 aa1.15□□□□□ -2.23
PHC3-216ENST00000497171 RPL22L1Q6P5R6 122 aaKnown RBP1.15□□□□□ -2.23
PHC3-216ENST00000497171 Q6ZSA8 131 aa1.15□□□□□ -2.23
PHC3-216ENST00000497171 AAED1Q7RTV5 226 aa1.15□□□□□ -2.23
PHC3-216ENST00000497171 C20orf196Q8IYI0 205 aa1.15□□□□□ -2.23
PHC3-216ENST00000497171 OR8J2Q8NGG1 315 aa1.15□□□□□ -2.23
PHC3-216ENST00000497171 TMEM106AQ96A25 262 aa1.15□□□□□ -2.23
PHC3-216ENST00000497171 C8orf76Q96K31 380 aa1.15□□□□□ -2.23
PHC3-216ENST00000497171 DERL1Q9BUN8 251 aa1.15□□□□□ -2.23
PHC3-216ENST00000497171 C11orf68Q9H3H3 251 aaKnown RBP1.15□□□□□ -2.23
PHC3-216ENST00000497171 BAIAP2Q9UQB8 552 aa1.15□□□□□ -2.23
PHC3-216ENST00000497171 COL4A1P02462 1669 aa1.15□□□□□ -2.23
PHC3-216ENST00000497171 RALGAPA2Q2PPJ7 1873 aa1.15□□□□□ -2.23
PHC3-216ENST00000497171 MAST2Q6P0Q8 1798 aa1.14□□□□□ -2.23
PHC3-216ENST00000497171 CLDN24A6NM45 220 aa1.14□□□□□ -2.23
PHC3-216ENST00000497171 FAAHO00519 579 aa1.14□□□□□ -2.23
PHC3-216ENST00000497171 CHP2O43745 196 aa1.14□□□□□ -2.23
PHC3-216ENST00000497171 METTL15P1P0C7V9 234 aa1.14□□□□□ -2.23
PHC3-216ENST00000497171 FXYD2P54710 66 aa1.14□□□□□ -2.23
PHC3-216ENST00000497171 SNRPD2P62316 118 aaKnown RBP1.14□□□□□ -2.23
PHC3-216ENST00000497171 AESQ08117 197 aa1.14□□□□□ -2.23
PHC3-216ENST00000497171 ACOT6Q3I5F7 207 aaPredicted RBP1.14□□□□□ -2.23
PHC3-216ENST00000497171 IBA57Q5T440 356 aaKnown RBP1.14□□□□□ -2.23
PHC3-216ENST00000497171 CLVS1Q8IUQ0 354 aaPredicted RBP1.14□□□□□ -2.23
PHC3-216ENST00000497171 LINC00471Q8N535 108 aa1.14□□□□□ -2.23
PHC3-216ENST00000497171 CLDN22Q8N7P3 220 aa1.14□□□□□ -2.23
PHC3-216ENST00000497171 FBXL12Q9NXK8 326 aa1.14□□□□□ -2.23
PHC3-216ENST00000497171 TTC21AQ8NDW8 1320 aa1.14□□□□□ -2.23
PHC3-216ENST00000497171 KIAA2026Q5HYC2 2103 aa1.13□□□□□ -2.23
PHC3-216ENST00000497171 TRAV9-1A0A075B6T8 112 aa1.13□□□□□ -2.23
PHC3-216ENST00000497171 IGKV1D-43A0A0B4J1Z2 117 aa1.13□□□□□ -2.23
PHC3-216ENST00000497171 TMEM212A6NML5 194 aa1.13□□□□□ -2.23
PHC3-216ENST00000497171 IBA57-AS1B1ANH7 110 aa1.13□□□□□ -2.23
PHC3-216ENST00000497171 F8W036 122 aa1.13□□□□□ -2.23
PHC3-216ENST00000497171 HIST1H1TP22492 207 aaPredicted RBP1.13□□□□□ -2.23
PHC3-216ENST00000497171 CDKN2CP42773 168 aa1.13□□□□□ -2.23
PHC3-216ENST00000497171 RPS20P60866 119 aaKnown RBP1.13□□□□□ -2.23
PHC3-216ENST00000497171 RUNX1Q01196 453 aa1.13□□□□□ -2.23
PHC3-216ENST00000497171 SPANXN3Q5MJ09 141 aa1.13□□□□□ -2.23
PHC3-216ENST00000497171 SYPL2Q5VXT5 272 aa1.13□□□□□ -2.23
PHC3-216ENST00000497171 DHFR2Q86XF0 187 aa1.13□□□□□ -2.23
PHC3-216ENST00000497171 C1orf158Q8N1D5 194 aa1.13□□□□□ -2.23
PHC3-216ENST00000497171 RASSF5Q8WWW0 418 aa1.13□□□□□ -2.23
PHC3-216ENST00000497171 C11orf40Q8WZ69 217 aa1.13□□□□□ -2.23
PHC3-216ENST00000497171 SCGB3A1Q96QR1 104 aa1.13□□□□□ -2.23
PHC3-216ENST00000497171 CCDC88AQ3V6T2 1871 aa1.13□□□□□ -2.23
PHC3-216ENST00000497171 TENM1Q9UKZ4 2725 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 EXOC1LA0A1B0GW35 172 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 DPRXA6NFQ7 191 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 OR4C46A6NHA9 309 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 PIRO00625 290 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 IGKV1-5P01602 117 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 STX5Q13190 355 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 ZNF345Q14585 488 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 CDK5R1Q15078 307 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 Q1T7F1 81 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 LCN15Q6UWW0 184 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 DPPA3Q6W0C5 159 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 KRT222Q8N1A0 295 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 CMSS1Q9BQ75 279 aaKnown RBP1.12□□□□□ -2.23
PHC3-216ENST00000497171 TMEM147Q9BVK8 224 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 OR51V1Q9H2C8 321 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.12□□□□□ -2.23
PHC3-216ENST00000497171 SLC39A9Q9NUM3 307 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 CKLFQ9UBR5 152 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 TP73-AS1Q9UF72 201 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 TMEM56-RWDD3S4R434 201 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 MALRD1Q5VYJ5 2156 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 WRNQ14191 1432 aaPredicted RBP eCLIP1.12□□□□□ -2.23
PHC3-216ENST00000497171 MYO3BQ8WXR4 1341 aa1.12□□□□□ -2.23
PHC3-216ENST00000497171 ZFHX2Q9C0A1 2572 aaPredicted RBP1.11□□□□□ -2.23
PHC3-216ENST00000497171 MTUS2Q5JR59 1369 aa1.11□□□□□ -2.23
PHC3-216ENST00000497171 KIF13BQ9NQT8 1826 aa1.11□□□□□ -2.23
PHC3-216ENST00000497171 IGKV2-40A0A087WW87 121 aaPredicted RBP1.11□□□□□ -2.23
PHC3-216ENST00000497171 PQLC2LA1A4F0 135 aa1.11□□□□□ -2.23
PHC3-216ENST00000497171 TRAPPC13A5PLN9 417 aa1.11□□□□□ -2.23
PHC3-216ENST00000497171 IGKV2D-40P01614 121 aaPredicted RBP1.11□□□□□ -2.23
PHC3-216ENST00000497171 SERPINA6P08185 405 aa1.11□□□□□ -2.23
PHC3-216ENST00000497171 ZNF80P51504 273 aaPredicted RBP1.11□□□□□ -2.23
PHC3-216ENST00000497171 SURF2Q15527 256 aaPredicted RBP1.11□□□□□ -2.23
PHC3-216ENST00000497171 KRTAP21-3Q3LHN1 58 aa1.11□□□□□ -2.23
PHC3-216ENST00000497171 KHDC3LQ587J8 217 aa1.11□□□□□ -2.23
PHC3-216ENST00000497171 C9orf163Q8N9P6 203 aa1.11□□□□□ -2.23
PHC3-216ENST00000497171 OR13C4Q8NGS5 318 aa1.11□□□□□ -2.23
PHC3-216ENST00000497171 H1FXQ92522 213 aaKnown RBP1.11□□□□□ -2.23
PHC3-216ENST00000497171 TOMM6Q96B49 74 aa1.11□□□□□ -2.23
PHC3-216ENST00000497171 SERPINI1Q99574 410 aa1.11□□□□□ -2.23
PHC3-216ENST00000497171 NIPSNAP1Q9BPW8 284 aa1.11□□□□□ -2.23
PHC3-216ENST00000497171 ADAT1Q9BUB4 502 aaKnown RBP1.11□□□□□ -2.23
PHC3-216ENST00000497171 YIPF3Q9GZM5 350 aa1.11□□□□□ -2.23
PHC3-216ENST00000497171 CCDC90BQ9GZT6 254 aa1.11□□□□□ -2.23
PHC3-216ENST00000497171 SOX21Q9Y651 276 aaPredicted RBP1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 195.6 ms