RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 C3orf85A0A1B0GTC6 90 aa25.09■■□□□ 1.61
CBX4-203ENST00000494546 TMEM213A2RRL7 107 aa25.09■■□□□ 1.61
CBX4-203ENST00000494546 A8MWP6 167 aa25.09■■□□□ 1.61
CBX4-203ENST00000494546 MEF2DQ14814 521 aa25.09■■□□□ 1.61
CBX4-203ENST00000494546 GUCA2BQ16661 112 aa25.09■■□□□ 1.61
CBX4-203ENST00000494546 IZUMO4Q1ZYL8 232 aa25.09■■□□□ 1.61
CBX4-203ENST00000494546 UNQ9165/PRO28630Q6UXU0 137 aa25.09■■□□□ 1.61
CBX4-203ENST00000494546 CCDC71LQ8N9Z2 235 aa25.09■■□□□ 1.61
CBX4-203ENST00000494546 ISOC1Q96CN7 298 aa25.09■■□□□ 1.61
CBX4-203ENST00000494546 OR2T8A6NH00 312 aa25.08■■□□□ 1.61
CBX4-203ENST00000494546 TGOLN2O43493 480 aa25.08■■□□□ 1.61
CBX4-203ENST00000494546 CD81P60033 236 aa25.08■■□□□ 1.61
CBX4-203ENST00000494546 OR1L6Q8NGR2 347 aa25.08■■□□□ 1.61
CBX4-203ENST00000494546 TUBA4BQ9H853 241 aa25.08■■□□□ 1.61
CBX4-203ENST00000494546 ZNF785A8K8V0 405 aa25.07■■□□□ 1.6
CBX4-203ENST00000494546 CTDSPLO15194 276 aa25.07■■□□□ 1.6
CBX4-203ENST00000494546 AKR1C2P52895 323 aa25.07■■□□□ 1.6
CBX4-203ENST00000494546 SP6Q3SY56 376 aa25.07■■□□□ 1.6
CBX4-203ENST00000494546 TM4SF20Q53R12 229 aa25.07■■□□□ 1.6
CBX4-203ENST00000494546 UXS1Q8NBZ7 420 aa25.07■■□□□ 1.6
CBX4-203ENST00000494546 SCARB1Q8WTV0 552 aa25.07■■□□□ 1.6
CBX4-203ENST00000494546 SLIRPQ9GZT3 109 aaKnown RBP25.07■■□□□ 1.6
CBX4-203ENST00000494546 PALMDQ9NP74 551 aa25.07■■□□□ 1.6
CBX4-203ENST00000494546 C21orf62Q9NYP8 219 aa25.07■■□□□ 1.6
CBX4-203ENST00000494546 RABL2AQ9UBK7 228 aaPredicted RBP25.07■■□□□ 1.6
CBX4-203ENST00000494546 RABL2BQ9UNT1 228 aa25.07■■□□□ 1.6
CBX4-203ENST00000494546 IGKV1-5P01602 117 aa25.06■■□□□ 1.6
CBX4-203ENST00000494546 HSPE1P61604 102 aaKnown RBP25.06■■□□□ 1.6
CBX4-203ENST00000494546 PRCDQ00LT1 54 aa25.06■■□□□ 1.6
CBX4-203ENST00000494546 TRIM16LQ309B1 348 aa25.06■■□□□ 1.6
CBX4-203ENST00000494546 OR1P1Q8NH06 330 aa25.06■■□□□ 1.6
CBX4-203ENST00000494546 WDR89Q96FK6 387 aaPredicted RBP25.06■■□□□ 1.6
CBX4-203ENST00000494546 SLC2A8Q9NY64 477 aa25.06■■□□□ 1.6
CBX4-203ENST00000494546 DISC1C4P0D8 188 aa25.05■■□□□ 1.6
CBX4-203ENST00000494546 CTSDP07339 412 aaPredicted RBP25.05■■□□□ 1.6
CBX4-203ENST00000494546 OR2C3Q8N628 320 aa25.05■■□□□ 1.6
CBX4-203ENST00000494546 UBAC2Q8NBM4 344 aa25.05■■□□□ 1.6
CBX4-203ENST00000494546 NEURL2Q9BR09 285 aa25.05■■□□□ 1.6
CBX4-203ENST00000494546 K7EIM0 57 aa25.04■■□□□ 1.6
CBX4-203ENST00000494546 ATG12O94817 140 aa25.04■■□□□ 1.6
CBX4-203ENST00000494546 AKAIN1P0CW23 69 aa25.04■■□□□ 1.6
CBX4-203ENST00000494546 ZNF57Q68EA5 555 aaPredicted RBP25.04■■□□□ 1.6
CBX4-203ENST00000494546 OR4C16Q8NGL9 310 aa25.04■■□□□ 1.6
CBX4-203ENST00000494546 BSCL2Q96G97 398 aaPredicted RBP25.04■■□□□ 1.6
CBX4-203ENST00000494546 PLEKHA3Q9HB20 300 aa25.04■■□□□ 1.6
CBX4-203ENST00000494546 MLXQ9UH92 298 aa25.04■■□□□ 1.6
CBX4-203ENST00000494546 C14orf166Q9Y224 244 aaKnown RBP25.04■■□□□ 1.6
CBX4-203ENST00000494546 UFC1Q9Y3C8 167 aa25.04■■□□□ 1.6
CBX4-203ENST00000494546 CD7P09564 240 aa25.03■■□□□ 1.6
CBX4-203ENST00000494546 Q56UQ5 140 aa25.03■■□□□ 1.6
CBX4-203ENST00000494546 SPINK9Q5DT21 86 aa25.03■■□□□ 1.6
CBX4-203ENST00000494546 MISP3Q96FF7 219 aa25.03■■□□□ 1.6
CBX4-203ENST00000494546 ZNF436Q9C0F3 470 aaPredicted RBP25.03■■□□□ 1.6
CBX4-203ENST00000494546 SPSB3Q6PJ21 355 aa25.02■■□□□ 1.6
CBX4-203ENST00000494546 TMEM61Q8N0U2 210 aa25.02■■□□□ 1.6
CBX4-203ENST00000494546 MCFD2Q8NI22 146 aa25.02■■□□□ 1.6
CBX4-203ENST00000494546 TM2D3Q9BRN9 247 aa25.02■■□□□ 1.6
CBX4-203ENST00000494546 TNFSF8P32971 234 aa25.01■■□□□ 1.59
CBX4-203ENST00000494546 ERHP84090 104 aaKnown RBP25.01■■□□□ 1.59
CBX4-203ENST00000494546 BTNL8Q6UX41 500 aa25.01■■□□□ 1.59
CBX4-203ENST00000494546 RNASE11Q8TAA1 199 aaKnown RBP25.01■■□□□ 1.59
CBX4-203ENST00000494546 MARC2Q969Z3 335 aa25.01■■□□□ 1.59
CBX4-203ENST00000494546 ATP6V0BQ99437 205 aa25.01■■□□□ 1.59
CBX4-203ENST00000494546 CHRDL1Q9BU40 450 aa25.01■■□□□ 1.59
CBX4-203ENST00000494546 RSL24D1Q9UHA3 163 aaKnown RBP25.01■■□□□ 1.59
CBX4-203ENST00000494546 CEPT1Q9Y6K0 416 aa25.01■■□□□ 1.59
CBX4-203ENST00000494546 A0A0B4J293 547 aa25■■□□□ 1.59
CBX4-203ENST00000494546 F8W735 103 aaPredicted RBP25■■□□□ 1.59
CBX4-203ENST00000494546 P0C879 139 aa25■■□□□ 1.59
CBX4-203ENST00000494546 UCP1P25874 307 aa25■■□□□ 1.59
CBX4-203ENST00000494546 ELLP55199 621 aaPredicted RBP25■■□□□ 1.59
CBX4-203ENST00000494546 TMEM190Q8WZ59 177 aa25■■□□□ 1.59
CBX4-203ENST00000494546 RTBDNQ9BSG5 229 aaPredicted RBP25■■□□□ 1.59
CBX4-203ENST00000494546 HUWE1Q7Z6Z7 4374 aaKnown RBP24.99■■□□□ 1.59
CBX4-203ENST00000494546 TEX13DA0A0J9YY54 714 aaPredicted RBP24.99■■□□□ 1.59
CBX4-203ENST00000494546 FABP12A6NFH5 140 aa24.99■■□□□ 1.59
CBX4-203ENST00000494546 CCDC160A6NGH7 325 aa24.99■■□□□ 1.59
CBX4-203ENST00000494546 GSTZ1O43708 216 aaPredicted RBP24.99■■□□□ 1.59
CBX4-203ENST00000494546 B3GALNT1O75752 331 aa24.99■■□□□ 1.59
CBX4-203ENST00000494546 HAGHQ16775 308 aa24.99■■□□□ 1.59
CBX4-203ENST00000494546 SLC35G3Q8N808 338 aa24.99■■□□□ 1.59
CBX4-203ENST00000494546 ZNF114Q8NC26 417 aa24.99■■□□□ 1.59
CBX4-203ENST00000494546 RRNAD1Q96FB5 475 aaKnown RBP24.99■■□□□ 1.59
CBX4-203ENST00000494546 MRPL27Q9P0M9 148 aaKnown RBP24.99■■□□□ 1.59
CBX4-203ENST00000494546 ST8SIA3O43173 380 aa24.98■■□□□ 1.59
CBX4-203ENST00000494546 SCAF4O95104 1147 aaKnown RBP24.98■■□□□ 1.59
CBX4-203ENST00000494546 IFNA17P01571 189 aa24.98■■□□□ 1.59
CBX4-203ENST00000494546 OR5AC1P0C628 307 aa24.98■■□□□ 1.59
CBX4-203ENST00000494546 C8orf88P0DMB2 117 aa24.98■■□□□ 1.59
CBX4-203ENST00000494546 SURF2Q15527 256 aaPredicted RBP24.98■■□□□ 1.59
CBX4-203ENST00000494546 DEFB125Q8N687 156 aa24.98■■□□□ 1.59
CBX4-203ENST00000494546 OR51S1Q8NGJ8 323 aa24.98■■□□□ 1.59
CBX4-203ENST00000494546 PRRT1Q99946 306 aa24.98■■□□□ 1.59
CBX4-203ENST00000494546 PDCD10Q9BUL8 212 aa24.98■■□□□ 1.59
CBX4-203ENST00000494546 NXF2Q9GZY0 626 aaKnown RBP24.98■■□□□ 1.59
CBX4-203ENST00000494546 C5orf66Q9H5L9 145 aa24.98■■□□□ 1.59
CBX4-203ENST00000494546 ANKRD20A5PA0PJZ0 165 aa24.97■■□□□ 1.59
CBX4-203ENST00000494546 ADMP35318 185 aa24.97■■□□□ 1.59
CBX4-203ENST00000494546 PINX1Q96BK5 328 aaKnown RBP24.97■■□□□ 1.59
CBX4-203ENST00000494546 C20orf24Q9BUV8 137 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms