RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 PAQR4Q8N4S7 273 aaPredicted RBP16.09■□□□□ 0.17
COL27A1-207ENST00000494090 CBLN4Q9NTU7 201 aa16.09■□□□□ 0.17
COL27A1-207ENST00000494090 PEMTQ9UBM1 199 aa16.09■□□□□ 0.17
COL27A1-207ENST00000494090 AHCTF1Q8WYP5 2266 aa16.09■□□□□ 0.17
COL27A1-207ENST00000494090 LOC102724200A0A096LPH7 203 aaPredicted RBP16.09■□□□□ 0.17
COL27A1-207ENST00000494090 C7orf69Q9H7B7 122 aa16.09■□□□□ 0.17
COL27A1-207ENST00000494090 LINC00271P0C7V0 271 aa16.09■□□□□ 0.17
COL27A1-207ENST00000494090 Q6AWC8 147 aa16.09■□□□□ 0.17
COL27A1-207ENST00000494090 GTF3AQ92664 365 aaKnown RBP16.09■□□□□ 0.17
COL27A1-207ENST00000494090 LOC105371267A0A1B0GV96 52 aa16.09■□□□□ 0.17
COL27A1-207ENST00000494090 TNFRSF18Q9Y5U5 241 aa16.09■□□□□ 0.17
COL27A1-207ENST00000494090 CD69Q07108 199 aa16.08■□□□□ 0.17
COL27A1-207ENST00000494090 H7C2G1 150 aa16.08■□□□□ 0.16
COL27A1-207ENST00000494090 PSMG4Q5JS54 123 aa16.08■□□□□ 0.16
COL27A1-207ENST00000494090 SCGB1A1P11684 91 aa16.08■□□□□ 0.16
COL27A1-207ENST00000494090 TRAV9-1A0A075B6T8 112 aa16.08■□□□□ 0.16
COL27A1-207ENST00000494090 PLPPR1Q8TBJ4 325 aa16.08■□□□□ 0.16
COL27A1-207ENST00000494090 NPFFR1Q9GZQ6 430 aa16.08■□□□□ 0.16
COL27A1-207ENST00000494090 MYOD1P15172 320 aa16.07■□□□□ 0.16
COL27A1-207ENST00000494090 PAX1P15863 534 aa16.07■□□□□ 0.16
COL27A1-207ENST00000494090 LHX2P50458 406 aa16.07■□□□□ 0.16
COL27A1-207ENST00000494090 FGF16O43320 207 aa16.07■□□□□ 0.16
COL27A1-207ENST00000494090 C9orf106Q8NAJ2 232 aa16.07■□□□□ 0.16
COL27A1-207ENST00000494090 OTX1P32242 354 aaPredicted RBP16.07■□□□□ 0.16
COL27A1-207ENST00000494090 DPH3Q96FX2 82 aa16.07■□□□□ 0.16
COL27A1-207ENST00000494090 SUMO2P61956 95 aaKnown RBP16.07■□□□□ 0.16
COL27A1-207ENST00000494090 FMC1Q96HJ9 113 aa16.07■□□□□ 0.16
COL27A1-207ENST00000494090 SCO2A0A1W2PP80 73 aa16.06■□□□□ 0.16
COL27A1-207ENST00000494090 FOXA2Q9Y261 457 aaPredicted RBP16.06■□□□□ 0.16
COL27A1-207ENST00000494090 TET1Q8NFU7 2136 aa16.06■□□□□ 0.16
COL27A1-207ENST00000494090 H0YIZ8 118 aa16.06■□□□□ 0.16
COL27A1-207ENST00000494090 CIARTQ8N365 385 aaPredicted RBP16.06■□□□□ 0.16
COL27A1-207ENST00000494090 IGKV1D-13A0A0B4J2D9 117 aa16.06■□□□□ 0.16
COL27A1-207ENST00000494090 IGHV3-35A0A0C4DH35 117 aa16.06■□□□□ 0.16
COL27A1-207ENST00000494090 IGKV1-13P0DP09 117 aa16.06■□□□□ 0.16
COL27A1-207ENST00000494090 GREB1Q4ZG55 1949 aa16.06■□□□□ 0.16
COL27A1-207ENST00000494090 DPRXA6NFQ7 191 aa16.06■□□□□ 0.16
COL27A1-207ENST00000494090 OR11H12B2RN74 326 aa16.06■□□□□ 0.16
COL27A1-207ENST00000494090 OR11H1Q8NG94 326 aa16.06■□□□□ 0.16
COL27A1-207ENST00000494090 OR11H2Q8NH07 326 aa16.06■□□□□ 0.16
COL27A1-207ENST00000494090 ATP5G3P48201 142 aa16.05■□□□□ 0.16
COL27A1-207ENST00000494090 MRPL20Q9BYC9 149 aaKnown RBP16.05■□□□□ 0.16
COL27A1-207ENST00000494090 WDR90Q96KV7 1748 aa16.05■□□□□ 0.16
COL27A1-207ENST00000494090 PEX7O00628 323 aa16.05■□□□□ 0.16
COL27A1-207ENST00000494090 YPEL1O60688 119 aa16.05■□□□□ 0.16
COL27A1-207ENST00000494090 TGFAP01135 160 aa16.05■□□□□ 0.16
COL27A1-207ENST00000494090 TBR1Q16650 682 aa16.05■□□□□ 0.16
COL27A1-207ENST00000494090 FAM131CQ96AQ9 280 aa16.05■□□□□ 0.16
COL27A1-207ENST00000494090 YPEL2Q96QA6 119 aa16.05■□□□□ 0.16
COL27A1-207ENST00000494090 TMEM262E9PQX1 116 aa16.05■□□□□ 0.16
COL27A1-207ENST00000494090 SLC17A3O00476 420 aa16.05■□□□□ 0.16
COL27A1-207ENST00000494090 OR52E5Q8NH55 327 aa16.05■□□□□ 0.16
COL27A1-207ENST00000494090 SEMA5BQ9P283 1151 aa16.05■□□□□ 0.16
COL27A1-207ENST00000494090 ZNF319Q9P2F9 582 aa16.05■□□□□ 0.16
COL27A1-207ENST00000494090 LTBP1Q14766 1721 aa16.05■□□□□ 0.16
COL27A1-207ENST00000494090 DOCK4Q8N1I0 1966 aa16.05■□□□□ 0.16
COL27A1-207ENST00000494090 CASP8AP2Q9UKL3 1982 aa16.05■□□□□ 0.16
COL27A1-207ENST00000494090 ASXL3Q9C0F0 2248 aa16.05■□□□□ 0.16
COL27A1-207ENST00000494090 HOXA5P20719 270 aa16.05■□□□□ 0.16
COL27A1-207ENST00000494090 A0A0A6YYD4 124 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 TRAV24A0A0B4J272 114 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 ATP5LO75964 103 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 CFHR1Q03591 330 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 TMEM105Q8N8V8 129 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 KLK15Q9H2R5 256 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 C7orf71A4D174 169 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 GPR183P32249 361 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 C9JCJ5 164 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 NBR2O15453 112 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 IGKV3-20P01619 116 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 MRAP2Q96G30 205 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 PRELID3AQ96N28 172 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 FAM186AA6NE01 2351 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 CELA3BP08861 270 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 FAM201AQ5SY85 155 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 ZNF497Q6ZNH5 498 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 ATOH7Q8N100 152 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 E9PLN8 166 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 LRTM2Q8N967 370 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 VKORC1Q9BQB6 163 aa16.04■□□□□ 0.16
COL27A1-207ENST00000494090 WDR82Q6UXN9 313 aa16.03■□□□□ 0.16
COL27A1-207ENST00000494090 C2orf88Q9BSF0 95 aa16.03■□□□□ 0.16
COL27A1-207ENST00000494090 ZFP36L1Q07352 338 aaKnown RBP16.03■□□□□ 0.16
COL27A1-207ENST00000494090 DUX3Q96PT4 197 aa16.03■□□□□ 0.16
COL27A1-207ENST00000494090 A1L4Q6 167 aa16.03■□□□□ 0.16
COL27A1-207ENST00000494090 ID3Q02535 119 aa16.03■□□□□ 0.16
COL27A1-207ENST00000494090 PARD6GQ9BYG4 376 aaPredicted RBP16.03■□□□□ 0.16
COL27A1-207ENST00000494090 DNAL4O96015 105 aa16.03■□□□□ 0.16
COL27A1-207ENST00000494090 MST1P26927 711 aa16.03■□□□□ 0.16
COL27A1-207ENST00000494090 PRSS22Q9GZN4 317 aa16.03■□□□□ 0.16
COL27A1-207ENST00000494090 IGHV3OR16-13A0A075B7E8 117 aa16.02■□□□□ 0.16
COL27A1-207ENST00000494090 IGHV3-74A0A0B4J1X5 117 aa16.02■□□□□ 0.16
COL27A1-207ENST00000494090 A0A1B0GUT8 65 aa16.02■□□□□ 0.16
COL27A1-207ENST00000494090 RPL23P62829 140 aaKnown RBP16.02■□□□□ 0.16
COL27A1-207ENST00000494090 ITLN2Q8WWU7 325 aaPredicted RBP16.02■□□□□ 0.16
COL27A1-207ENST00000494090 SLC50A1Q9BRV3 221 aa16.02■□□□□ 0.16
COL27A1-207ENST00000494090 PLP1P60201 277 aa16.02■□□□□ 0.16
COL27A1-207ENST00000494090 SRSF3P84103 164 aaKnown RBP16.02■□□□□ 0.16
COL27A1-207ENST00000494090 PVRIGQ6DKI7 326 aa16.02■□□□□ 0.16
COL27A1-207ENST00000494090 ZNF414Q96IQ9 312 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms