RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 A0A1W2PPQ1 181 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 CD3EP07766 207 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 RNASE2P10153 161 aaKnown RBP7.86□□□□□ -1.15
NPHP3-209ENST00000493732 CD69Q07108 199 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 UTF1Q5T230 341 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 FAM78BQ5VT40 261 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 SNRNP40Q96DI7 357 aaKnown RBP7.86□□□□□ -1.15
NPHP3-209ENST00000493732 C1orf159Q96HA4 380 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 SFRP2Q96HF1 295 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 WFIKKN1Q96NZ8 548 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 NABP2Q9BQ15 211 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 MRPL20Q9BYC9 149 aaKnown RBP7.86□□□□□ -1.15
NPHP3-209ENST00000493732 GSN-AS1Q9NRJ2 163 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 MIOXQ9UGB7 285 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 CELSR3Q9NYQ7 3312 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 SRRM4A7MD48 611 aaKnown RBP7.86□□□□□ -1.15
NPHP3-209ENST00000493732 DVL1O14640 695 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 LINC00869P0C866 280 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 DEFA4P12838 97 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 IGFBP2P18065 325 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 TGIF2LXQ8IUE1 241 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 NECAP1Q8NC96 275 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 OR4P4Q8NGL7 312 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 SEPSECSQ9HD40 501 aaKnown RBP7.86□□□□□ -1.15
NPHP3-209ENST00000493732 DMRT1Q9Y5R6 373 aa7.86□□□□□ -1.15
NPHP3-209ENST00000493732 RAI1Q7Z5J4 1906 aaPredicted RBP7.85□□□□□ -1.15
NPHP3-209ENST00000493732 PRRC2CQ9Y520 2896 aaKnown RBP7.85□□□□□ -1.15
NPHP3-209ENST00000493732 CUL9Q8IWT3 2517 aa7.85□□□□□ -1.15
NPHP3-209ENST00000493732 IGHV1-69-2A0A0G2JMI3 117 aa7.85□□□□□ -1.15
NPHP3-209ENST00000493732 SHISA9B4DS77 424 aa7.85□□□□□ -1.15
NPHP3-209ENST00000493732 CCL3L1P16619 93 aa7.85□□□□□ -1.15
NPHP3-209ENST00000493732 UCNP55089 124 aa7.85□□□□□ -1.15
NPHP3-209ENST00000493732 SELENOTP62341 195 aa7.85□□□□□ -1.15
NPHP3-209ENST00000493732 GAMTQ14353 236 aa7.85□□□□□ -1.15
NPHP3-209ENST00000493732 TMEM155Q4W5P6 130 aa7.85□□□□□ -1.15
NPHP3-209ENST00000493732 ACTL10Q5JWF8 245 aa7.85□□□□□ -1.15
NPHP3-209ENST00000493732 ETFRF1Q6IPR1 90 aa7.85□□□□□ -1.15
NPHP3-209ENST00000493732 OR10G8Q8NGN5 311 aa7.85□□□□□ -1.15
NPHP3-209ENST00000493732 OR1L4Q8NGR5 311 aa7.85□□□□□ -1.15
NPHP3-209ENST00000493732 PFDN5Q99471 154 aa7.85□□□□□ -1.15
NPHP3-209ENST00000493732 GPR61Q9BZJ8 451 aa7.85□□□□□ -1.15
NPHP3-209ENST00000493732 SH3BGRL2Q9UJC5 107 aa7.85□□□□□ -1.15
NPHP3-209ENST00000493732 PLCE1Q9P212 2302 aa7.85□□□□□ -1.15
NPHP3-209ENST00000493732 A0A1W2PRE2 83 aa7.84□□□□□ -1.15
NPHP3-209ENST00000493732 IFITM10A6NMD0 228 aa7.84□□□□□ -1.15
NPHP3-209ENST00000493732 E7EQL1 145 aa7.84□□□□□ -1.15
NPHP3-209ENST00000493732 RBP4P02753 201 aa7.84□□□□□ -1.15
NPHP3-209ENST00000493732 SOD3P08294 240 aa7.84□□□□□ -1.15
NPHP3-209ENST00000493732 OR5G3P0C626 314 aa7.84□□□□□ -1.15
NPHP3-209ENST00000493732 OR10J1P30954 320 aa7.84□□□□□ -1.15
NPHP3-209ENST00000493732 PRRX1P54821 245 aa7.84□□□□□ -1.15
NPHP3-209ENST00000493732 FOXC1Q12948 553 aa7.84□□□□□ -1.15
NPHP3-209ENST00000493732 C4orf17Q53FE4 359 aa7.84□□□□□ -1.15
NPHP3-209ENST00000493732 OR10D4PQ8NGN7 298 aa7.84□□□□□ -1.15
NPHP3-209ENST00000493732 OR1P1Q8NH06 330 aa7.84□□□□□ -1.15
NPHP3-209ENST00000493732 ST6GALNAC6Q969X2 333 aa7.84□□□□□ -1.15
NPHP3-209ENST00000493732 TET2Q6N021 2002 aaPredicted RBP7.84□□□□□ -1.15
NPHP3-209ENST00000493732 SCO2A0A1W2PP80 73 aa7.84□□□□□ -1.16
NPHP3-209ENST00000493732 C8orf88P0DMB2 117 aa7.84□□□□□ -1.16
NPHP3-209ENST00000493732 IGHV1-8P0DP01 117 aa7.84□□□□□ -1.16
NPHP3-209ENST00000493732 LOXP28300 417 aaPredicted RBP7.84□□□□□ -1.16
NPHP3-209ENST00000493732 PDLIM4P50479 330 aa7.84□□□□□ -1.16
NPHP3-209ENST00000493732 DLX6P56179 175 aa7.84□□□□□ -1.16
NPHP3-209ENST00000493732 BPIFB3P59826 476 aa7.84□□□□□ -1.16
NPHP3-209ENST00000493732 PSG5Q15238 335 aa7.84□□□□□ -1.16
NPHP3-209ENST00000493732 FBXL19-AS1Q494R0 122 aa7.84□□□□□ -1.16
NPHP3-209ENST00000493732 ZCCHC24Q8N2G6 241 aaKnown RBP7.84□□□□□ -1.16
NPHP3-209ENST00000493732 TEX45Q8NA69 505 aa7.84□□□□□ -1.16
NPHP3-209ENST00000493732 OR5T1Q8NG75 326 aa7.84□□□□□ -1.16
NPHP3-209ENST00000493732 TMEM133Q9H2Q1 129 aa7.84□□□□□ -1.16
NPHP3-209ENST00000493732 YTHDF2Q9Y5A9 579 aaKnown RBP7.84□□□□□ -1.16
NPHP3-209ENST00000493732 A0A0U1RQK1 487 aa7.83□□□□□ -1.16
NPHP3-209ENST00000493732 ZNF320A2RRD8 509 aa7.83□□□□□ -1.16
NPHP3-209ENST00000493732 XKRY2A2RUG3 117 aa7.83□□□□□ -1.16
NPHP3-209ENST00000493732 FABP4P15090 132 aa7.83□□□□□ -1.16
NPHP3-209ENST00000493732 CHRNB4P30926 498 aa7.83□□□□□ -1.16
NPHP3-209ENST00000493732 COMPP49747 757 aaPredicted RBP7.83□□□□□ -1.16
NPHP3-209ENST00000493732 COX19Q49B96 90 aa7.83□□□□□ -1.16
NPHP3-209ENST00000493732 PYY3Q5JQD4 70 aa7.83□□□□□ -1.16
NPHP3-209ENST00000493732 TEX38Q6PEX7 206 aa7.83□□□□□ -1.16
NPHP3-209ENST00000493732 SGMS2Q8NHU3 365 aa7.83□□□□□ -1.16
NPHP3-209ENST00000493732 OCC1Q8TAD7 63 aa7.83□□□□□ -1.16
NPHP3-209ENST00000493732 C22orf15Q8WYQ4 148 aa7.83□□□□□ -1.16
NPHP3-209ENST00000493732 PACRGQ96M98 296 aaPredicted RBP7.83□□□□□ -1.16
NPHP3-209ENST00000493732 DERL1Q9BUN8 251 aa7.83□□□□□ -1.16
NPHP3-209ENST00000493732 ELOVL1Q9BW60 279 aa7.83□□□□□ -1.16
NPHP3-209ENST00000493732 DNAJC4Q9NNZ3 241 aa7.83□□□□□ -1.16
NPHP3-209ENST00000493732 RALYQ9UKM9 306 aaKnown RBP7.83□□□□□ -1.16
NPHP3-209ENST00000493732 ZNF292O60281 2723 aa7.83□□□□□ -1.16
NPHP3-209ENST00000493732 HELTA6NFD8 242 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 CORTO00230 105 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 OR7C2O60412 319 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 ACTL6BO94805 426 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 IGHV2-70P01814 119 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 MYOD1P15172 320 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 HIST1H1BP16401 226 aaKnown RBP7.82□□□□□ -1.16
NPHP3-209ENST00000493732 LYPD2Q6UXB3 125 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 MIR17HGQ75NE6 70 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 DMRTC2Q8IXT2 367 aaPredicted RBP7.82□□□□□ -1.16
NPHP3-209ENST00000493732 MMD2Q8IY49 270 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms