RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SIRPDQ9H106 197 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 MINOS1-NBL1R4GNA1 71 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 TIMM23O14925 209 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 FOXH1O75593 365 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 ACTL6BO94805 426 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 VENTXO95231 258 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 GPX4P36969 197 aaPredicted RBP11.28□□□□□ -0.6
PTPN7-216ENST00000492977 WT1-ASQ06250 92 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 KLRD1Q13241 179 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 ICAM4Q14773 271 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 CCDC144NLQ6NUI1 221 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 TMEM144Q7Z5S9 345 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 SUN5Q8TC36 379 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 C1orf159Q96HA4 380 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 GGTLC1Q9BX51 225 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 TPSG1Q9NRR2 321 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 CFAP46Q8IYW2 2715 aa11.28□□□□□ -0.6
PTPN7-216ENST00000492977 LOC102723971A0A1B0GUV8 181 aa11.27□□□□□ -0.61
PTPN7-216ENST00000492977 SEC14L6B5MCN3 397 aa11.27□□□□□ -0.61
PTPN7-216ENST00000492977 NDUFS8O00217 210 aa11.27□□□□□ -0.61
PTPN7-216ENST00000492977 IFNA1P01562 189 aa11.27□□□□□ -0.61
PTPN7-216ENST00000492977 HOXB4P17483 251 aaPredicted RBP11.27□□□□□ -0.61
PTPN7-216ENST00000492977 CNTFRP26992 372 aa11.27□□□□□ -0.61
PTPN7-216ENST00000492977 RPL27AP46776 148 aaKnown RBP11.27□□□□□ -0.61
PTPN7-216ENST00000492977 CD69Q07108 199 aa11.27□□□□□ -0.61
PTPN7-216ENST00000492977 PPP1R27Q86WC6 154 aa11.27□□□□□ -0.61
PTPN7-216ENST00000492977 RNASEH2CQ8TDP1 164 aaKnown RBP11.27□□□□□ -0.61
PTPN7-216ENST00000492977 CFHR4Q92496 578 aa11.27□□□□□ -0.61
PTPN7-216ENST00000492977 PIMREGQ9BSJ6 248 aa11.27□□□□□ -0.61
PTPN7-216ENST00000492977 GNG13Q9P2W3 67 aa11.27□□□□□ -0.61
PTPN7-216ENST00000492977 METTL1Q9UBP6 276 aaKnown RBP11.27□□□□□ -0.61
PTPN7-216ENST00000492977 POLR3KQ9Y2Y1 108 aaPredicted RBP11.27□□□□□ -0.61
PTPN7-216ENST00000492977 DOPEY1Q5JWR5 2465 aa11.26□□□□□ -0.61
PTPN7-216ENST00000492977 SRP19P09132 144 aaKnown RBP11.26□□□□□ -0.61
PTPN7-216ENST00000492977 OR13C7P0DN81 318 aa11.26□□□□□ -0.61
PTPN7-216ENST00000492977 BCL2P10415 239 aa11.26□□□□□ -0.61
PTPN7-216ENST00000492977 RPL29P47914 159 aaKnown RBP11.26□□□□□ -0.61
PTPN7-216ENST00000492977 COMPP49747 757 aaPredicted RBP11.26□□□□□ -0.61
PTPN7-216ENST00000492977 FGF8P55075 233 aaPredicted RBP11.26□□□□□ -0.61
PTPN7-216ENST00000492977 SOHLH1Q5JUK2 328 aa11.26□□□□□ -0.61
PTPN7-216ENST00000492977 C10orf55Q5SWW7 151 aa11.26□□□□□ -0.61
PTPN7-216ENST00000492977 FAM122CQ6P4D5 195 aa11.26□□□□□ -0.61
PTPN7-216ENST00000492977 RBMS3Q6XE24 437 aaKnown RBP11.26□□□□□ -0.61
PTPN7-216ENST00000492977 LHFPL4Q7Z7J7 247 aa11.26□□□□□ -0.61
PTPN7-216ENST00000492977 FAM168AQ92567 244 aa11.26□□□□□ -0.61
PTPN7-216ENST00000492977 RAB24Q969Q5 203 aa11.26□□□□□ -0.61
PTPN7-216ENST00000492977 SLC25A22Q9H936 323 aa11.26□□□□□ -0.61
PTPN7-216ENST00000492977 HILPDAQ9Y5L2 63 aa11.26□□□□□ -0.61
PTPN7-216ENST00000492977 PXMP4Q9Y6I8 212 aa11.26□□□□□ -0.61
PTPN7-216ENST00000492977 TOX4O94842 621 aa11.25□□□□□ -0.61
PTPN7-216ENST00000492977 YIF1AO95070 293 aa11.25□□□□□ -0.61
PTPN7-216ENST00000492977 MOSP00540 346 aa11.25□□□□□ -0.61
PTPN7-216ENST00000492977 TAGLN2P37802 199 aaKnown RBP11.25□□□□□ -0.61
PTPN7-216ENST00000492977 CDC34P49427 236 aaPredicted RBP11.25□□□□□ -0.61
PTPN7-216ENST00000492977 LGALS4P56470 323 aa11.25□□□□□ -0.61
PTPN7-216ENST00000492977 GAMTQ14353 236 aa11.25□□□□□ -0.61
PTPN7-216ENST00000492977 TNXAQ16473 311 aa11.25□□□□□ -0.61
PTPN7-216ENST00000492977 TMEM249Q2WGJ8 235 aa11.25□□□□□ -0.61
PTPN7-216ENST00000492977 MIC13Q5XKP0 118 aa11.25□□□□□ -0.61
PTPN7-216ENST00000492977 CLRN3Q8NCR9 226 aa11.25□□□□□ -0.61
PTPN7-216ENST00000492977 RXFP4Q8TDU9 374 aa11.25□□□□□ -0.61
PTPN7-216ENST00000492977 TBL2Q9Y4P3 447 aaKnown RBP11.25□□□□□ -0.61
PTPN7-216ENST00000492977 A0A1W2PPV4 95 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 IGLC7A0M8Q6 106 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 ZFP92A6NM28 416 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 DNASE2O00115 360 aaPredicted RBP11.24□□□□□ -0.61
PTPN7-216ENST00000492977 NPBWR1P48145 328 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 UBE2E1P51965 193 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 B2MP61769 119 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 SAMD5Q5TGI4 173 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 ZNF114Q8NC26 417 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 NPBQ8NG41 125 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 P2RX4Q99571 388 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 SRSF8Q9BRL6 282 aaKnown RBP11.24□□□□□ -0.61
PTPN7-216ENST00000492977 FBXL15Q9H469 300 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 VAX2Q9UIW0 290 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 DCHS2Q6V1P9 2916 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 VWC2LB2RUY7 222 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 NBR2O15453 112 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 NDUFS6O75380 124 aaKnown RBP11.24□□□□□ -0.61
PTPN7-216ENST00000492977 SNRNP70P08621 437 aaKnown RBP11.24□□□□□ -0.61
PTPN7-216ENST00000492977 ATP5J2P56134 94 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 PVRIGQ6DKI7 326 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 CLEC2AQ6UVW9 174 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 SLC16A13Q7RTY0 426 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 STPG3Q8N7X2 389 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.24□□□□□ -0.61
PTPN7-216ENST00000492977 C10orf105Q8TEF2 133 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 SLC35E1Q96K37 410 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 SLC45A2Q9UMX9 530 aa11.24□□□□□ -0.61
PTPN7-216ENST00000492977 A0A1W2PRD5 423 aa11.23□□□□□ -0.61
PTPN7-216ENST00000492977 A0A1W2PRF3 423 aa11.23□□□□□ -0.61
PTPN7-216ENST00000492977 A0A1W2PRM7 423 aa11.23□□□□□ -0.61
PTPN7-216ENST00000492977 NDUFA3O95167 84 aa11.23□□□□□ -0.61
PTPN7-216ENST00000492977 PLGLAQ15195 96 aa11.23□□□□□ -0.61
PTPN7-216ENST00000492977 MMDQ15546 238 aa11.23□□□□□ -0.61
PTPN7-216ENST00000492977 SSX2Q16385 188 aa11.23□□□□□ -0.61
PTPN7-216ENST00000492977 ETFRF1Q6IPR1 90 aa11.23□□□□□ -0.61
PTPN7-216ENST00000492977 SLC35E3Q7Z769 313 aa11.23□□□□□ -0.61
PTPN7-216ENST00000492977 OR2T10Q8NGZ9 312 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms