RNA–Protein interactions for RNA: ENST00000490883.1

SEMA3A-207, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 237 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-207ENST00000490883 LYNX1P0DP58 116 aa1.2□□□□□ -2.22
SEMA3A-207ENST00000490883 HIST1H1TP22492 207 aaPredicted RBP1.2□□□□□ -2.22
SEMA3A-207ENST00000490883 SUPT4H1P63272 117 aaKnown RBP1.2□□□□□ -2.22
SEMA3A-207ENST00000490883 IFITM2Q01629 132 aa1.2□□□□□ -2.22
SEMA3A-207ENST00000490883 ELOBQ15370 118 aa1.2□□□□□ -2.22
SEMA3A-207ENST00000490883 ACOT6Q3I5F7 207 aaPredicted RBP1.2□□□□□ -2.22
SEMA3A-207ENST00000490883 Q6ZS49 121 aa1.2□□□□□ -2.22
SEMA3A-207ENST00000490883 DCXRQ7Z4W1 244 aa1.2□□□□□ -2.22
SEMA3A-207ENST00000490883 C20orf196Q8IYI0 205 aa1.2□□□□□ -2.22
SEMA3A-207ENST00000490883 ZNF439Q8NDP4 499 aa1.2□□□□□ -2.22
SEMA3A-207ENST00000490883 RASSF5Q8WWW0 418 aa1.2□□□□□ -2.22
SEMA3A-207ENST00000490883 PPP1R2P1Q96PQ5 205 aa1.2□□□□□ -2.22
SEMA3A-207ENST00000490883 DERL1Q9BUN8 251 aa1.2□□□□□ -2.22
SEMA3A-207ENST00000490883 FLG2Q5D862 2391 aaPredicted RBP1.2□□□□□ -2.22
SEMA3A-207ENST00000490883 SNAPC4Q5SXM2 1469 aa1.19□□□□□ -2.22
SEMA3A-207ENST00000490883 TNNC2P02585 160 aa1.19□□□□□ -2.22
SEMA3A-207ENST00000490883 METTL15P1P0C7V9 234 aa1.19□□□□□ -2.22
SEMA3A-207ENST00000490883 RPS4Y1P22090 263 aaKnown RBP1.19□□□□□ -2.22
SEMA3A-207ENST00000490883 SULT1A1P50225 295 aa1.19□□□□□ -2.22
SEMA3A-207ENST00000490883 PSME3P61289 254 aa1.19□□□□□ -2.22
SEMA3A-207ENST00000490883 ZNF345Q14585 488 aa1.19□□□□□ -2.22
SEMA3A-207ENST00000490883 NDUFA5Q16718 116 aa1.19□□□□□ -2.22
SEMA3A-207ENST00000490883 CCDC88AQ3V6T2 1871 aa1.19□□□□□ -2.22
SEMA3A-207ENST00000490883 AADACL3Q5VUY0 350 aa1.19□□□□□ -2.22
SEMA3A-207ENST00000490883 ALPK2Q86TB3 2170 aa1.19□□□□□ -2.22
SEMA3A-207ENST00000490883 LRRC25Q8N386 305 aaPredicted RBP1.19□□□□□ -2.22
SEMA3A-207ENST00000490883 OR8J2Q8NGG1 315 aa1.19□□□□□ -2.22
SEMA3A-207ENST00000490883 MRPL30Q8TCC3 161 aaKnown RBP1.19□□□□□ -2.22
SEMA3A-207ENST00000490883 C11orf40Q8WZ69 217 aa1.19□□□□□ -2.22
SEMA3A-207ENST00000490883 VPS29Q9UBQ0 182 aa1.19□□□□□ -2.22
SEMA3A-207ENST00000490883 DOCK5Q9H7D0 1870 aa1.18□□□□□ -2.22
SEMA3A-207ENST00000490883 IGKV1D-43A0A0B4J1Z2 117 aa1.18□□□□□ -2.22
SEMA3A-207ENST00000490883 SMIM23A6NLE4 172 aa1.18□□□□□ -2.22
SEMA3A-207ENST00000490883 SDCBPO00560 298 aaPredicted RBP1.18□□□□□ -2.22
SEMA3A-207ENST00000490883 IGKV1-5P01602 117 aa1.18□□□□□ -2.22
SEMA3A-207ENST00000490883 HLA-DRB1P01911 266 aa1.18□□□□□ -2.22
SEMA3A-207ENST00000490883 CLPSP04118 112 aa1.18□□□□□ -2.22
SEMA3A-207ENST00000490883 SERPINA6P08185 405 aa1.18□□□□□ -2.22
SEMA3A-207ENST00000490883 CD79AP11912 226 aa1.18□□□□□ -2.22
SEMA3A-207ENST00000490883 KRTAP10-4P60372 401 aaPredicted RBP1.18□□□□□ -2.22
SEMA3A-207ENST00000490883 SNRPD2P62316 118 aaKnown RBP1.18□□□□□ -2.22
SEMA3A-207ENST00000490883 RPL22L1Q6P5R6 122 aaKnown RBP1.18□□□□□ -2.22
SEMA3A-207ENST00000490883 OR13C4Q8NGS5 318 aa1.18□□□□□ -2.22
SEMA3A-207ENST00000490883 C10orf105Q8TEF2 133 aa1.18□□□□□ -2.22
SEMA3A-207ENST00000490883 NIPSNAP1Q9BPW8 284 aa1.18□□□□□ -2.22
SEMA3A-207ENST00000490883 MED9Q9NWA0 146 aa1.18□□□□□ -2.22
SEMA3A-207ENST00000490883 MRPL27Q9P0M9 148 aaKnown RBP1.18□□□□□ -2.22
SEMA3A-207ENST00000490883 PSMD12O00232 456 aaPredicted RBP1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 FAAHO00519 579 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 CHP2O43745 196 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 PMP2P02689 132 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 HIST1H2BOP23527 126 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 HIST1H2BBP33778 126 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 HIST1H2BDP58876 126 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 HIST1H2BCP62807 126 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 HBA1P69905 142 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 STX5Q13190 355 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 HIST2H2BEQ16778 126 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 RPS19BP1Q86WX3 136 aaKnown RBP1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 Q8N2B8 174 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 HIST1H2BHQ93079 126 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 TMEM106AQ96A25 262 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 HIST1H2BNQ99877 126 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 HIST1H2BMQ99879 126 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 ADAT1Q9BUB4 502 aaKnown RBP1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 YIPF3Q9GZM5 350 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 PRTFDC1Q9NRG1 225 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 FBXL12Q9NXK8 326 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 TP73-AS1Q9UF72 201 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 KIF13BQ9NQT8 1826 aa1.17□□□□□ -2.22
SEMA3A-207ENST00000490883 WRNQ14191 1432 aaPredicted RBP eCLIP1.16□□□□□ -2.22
SEMA3A-207ENST00000490883 IGKV3D-7A0A0C4DH55 119 aa1.16□□□□□ -2.22
SEMA3A-207ENST00000490883 IGKV3OR2-268A0A0C4DH90 116 aa1.16□□□□□ -2.22
SEMA3A-207ENST00000490883 KPNA3O00505 521 aaPredicted RBP1.16□□□□□ -2.22
SEMA3A-207ENST00000490883 RGS21Q2M5E4 152 aa1.16□□□□□ -2.22
SEMA3A-207ENST00000490883 LCN15Q6UWW0 184 aa1.16□□□□□ -2.22
SEMA3A-207ENST00000490883 C15orf53Q8NAA6 179 aa1.16□□□□□ -2.22
SEMA3A-207ENST00000490883 PFN4Q8NHR9 129 aa1.16□□□□□ -2.22
SEMA3A-207ENST00000490883 PKIGQ9Y2B9 76 aa1.16□□□□□ -2.22
SEMA3A-207ENST00000490883 MTUS2Q5JR59 1369 aa1.16□□□□□ -2.22
SEMA3A-207ENST00000490883 PLB1Q6P1J6 1458 aa1.16□□□□□ -2.22
SEMA3A-207ENST00000490883 CLDN24A6NM45 220 aa1.15□□□□□ -2.23
SEMA3A-207ENST00000490883 TTRP02766 147 aa1.15□□□□□ -2.23
SEMA3A-207ENST00000490883 RPL5P46777 297 aaKnown RBP1.15□□□□□ -2.23
SEMA3A-207ENST00000490883 EIF2B2P49770 351 aaKnown RBP1.15□□□□□ -2.23
SEMA3A-207ENST00000490883 RPS20P60866 119 aaKnown RBP1.15□□□□□ -2.23
SEMA3A-207ENST00000490883 ITGB3BPQ13352 177 aaPredicted RBP1.15□□□□□ -2.23
SEMA3A-207ENST00000490883 ZNF846Q147U1 533 aa1.15□□□□□ -2.23
SEMA3A-207ENST00000490883 KCNJ8Q15842 424 aa1.15□□□□□ -2.23
SEMA3A-207ENST00000490883 SPANXN3Q5MJ09 141 aa1.15□□□□□ -2.23
SEMA3A-207ENST00000490883 CLDN22Q8N7P3 220 aa1.15□□□□□ -2.23
SEMA3A-207ENST00000490883 MCFD2Q8NI22 146 aa1.15□□□□□ -2.23
SEMA3A-207ENST00000490883 TOMM6Q96B49 74 aa1.15□□□□□ -2.23
SEMA3A-207ENST00000490883 TSPAN32Q96QS1 320 aa1.15□□□□□ -2.23
SEMA3A-207ENST00000490883 C20orf27Q9GZN8 174 aa1.15□□□□□ -2.23
SEMA3A-207ENST00000490883 COMMD5Q9GZQ3 224 aa1.15□□□□□ -2.23
SEMA3A-207ENST00000490883 SOX21Q9Y651 276 aaPredicted RBP1.15□□□□□ -2.23
SEMA3A-207ENST00000490883 NUP155O75694 1391 aa1.15□□□□□ -2.23
SEMA3A-207ENST00000490883 GLI3P10071 1580 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms