RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 PRRT1Q99946 306 aa6.92□□□□□ -1.3
SUPT20H-220ENST00000490716 ZFAND3Q9H8U3 227 aa6.92□□□□□ -1.3
SUPT20H-220ENST00000490716 MRPL36Q9P0J6 103 aaKnown RBP6.92□□□□□ -1.3
SUPT20H-220ENST00000490716 ST8SIA3O43173 380 aa6.92□□□□□ -1.3
SUPT20H-220ENST00000490716 TRAPPC2P0DI81 140 aa6.92□□□□□ -1.3
SUPT20H-220ENST00000490716 TRAPPC2BP0DI82 140 aa6.92□□□□□ -1.3
SUPT20H-220ENST00000490716 IFITM3Q01628 133 aa6.92□□□□□ -1.3
SUPT20H-220ENST00000490716 IL18Q14116 193 aa6.92□□□□□ -1.3
SUPT20H-220ENST00000490716 C11orf87Q6NUJ2 197 aa6.92□□□□□ -1.3
SUPT20H-220ENST00000490716 HSPB7Q9UBY9 170 aa6.92□□□□□ -1.3
SUPT20H-220ENST00000490716 ZNF256Q9Y2P7 627 aaPredicted RBP6.92□□□□□ -1.3
SUPT20H-220ENST00000490716 HSPE1P61604 102 aaKnown RBP6.92□□□□□ -1.3
SUPT20H-220ENST00000490716 IZUMO4Q1ZYL8 232 aa6.92□□□□□ -1.3
SUPT20H-220ENST00000490716 TBC1D24Q9ULP9 559 aa6.92□□□□□ -1.3
SUPT20H-220ENST00000490716 IZUMO1RA6ND01 250 aa6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 ANKRD55Q3KP44 614 aa6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 UNQ9165/PRO28630Q6UXU0 137 aa6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 Q8N402 240 aa6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 OR1L8Q8NGR8 309 aa6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 GPR146Q96CH1 333 aa6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 TXN2Q99757 166 aa6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 FNDC4Q9H6D8 234 aaPredicted RBP6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 U3KQE9 123 aa6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 SCAF4O95104 1147 aaKnown RBP6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 NDUFB6O95139 128 aa6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 PF4P02776 101 aa6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 PRB2P02812 416 aaPredicted RBP6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 IL15RAQ13261 267 aa6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 C6orf62Q9GZU0 229 aaPredicted RBP6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 FKBP11Q9NYL4 201 aa6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 MLXQ9UH92 298 aa6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 DUXBA0A1W2PPF3 345 aa6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 PPP5D1E7EU14 171 aa6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 IGHV3-11P01762 117 aa6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 ELLP55199 621 aaPredicted RBP6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 SCARB1Q8WTV0 552 aa6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 RBPMSQ93062 196 aaKnown RBP6.91□□□□□ -1.3
SUPT20H-220ENST00000490716 DNAH2Q9P225 4427 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 NXPH3O95157 252 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 KRASP01116 189 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 PPP5CP53041 499 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 PLGLAQ15195 96 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 SSX9Q7RTT3 188 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 CHRDL1Q9BU40 450 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 NSG2Q9Y328 171 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 C2orf70A6NJV1 201 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 PMS2P5A8MQ11 134 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 SEC14L6B5MCN3 397 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 REG1AP05451 166 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 APELAP0DMC3 54 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 DEFB114Q30KQ6 69 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 CNPY1Q3B7I2 92 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 SP6Q3SY56 376 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 DCUN1D5Q9BTE7 237 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 FBXL7Q9UJT9 491 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 FAT2Q9NYQ8 4349 aa6.9□□□□□ -1.3
SUPT20H-220ENST00000490716 C13orf42A0A1B0GVH6 325 aa6.9□□□□□ -1.31
SUPT20H-220ENST00000490716 K7EMT4 169 aa6.9□□□□□ -1.31
SUPT20H-220ENST00000490716 CNIH1O95406 144 aa6.9□□□□□ -1.31
SUPT20H-220ENST00000490716 SPNP16150 400 aa6.9□□□□□ -1.31
SUPT20H-220ENST00000490716 ZP3P21754 424 aa6.9□□□□□ -1.31
SUPT20H-220ENST00000490716 UBE2MP61081 183 aaKnown RBP6.9□□□□□ -1.31
SUPT20H-220ENST00000490716 ATP5G2Q06055 141 aa6.9□□□□□ -1.31
SUPT20H-220ENST00000490716 C2orf83Q53S99 150 aa6.9□□□□□ -1.31
SUPT20H-220ENST00000490716 RNASE12Q5GAN4 147 aaKnown RBP6.9□□□□□ -1.31
SUPT20H-220ENST00000490716 SLC35G3Q8N808 338 aa6.9□□□□□ -1.31
SUPT20H-220ENST00000490716 TM2D3Q9BRN9 247 aa6.9□□□□□ -1.31
SUPT20H-220ENST00000490716 HECTD4Q9Y4D8 3996 aa6.9□□□□□ -1.31
SUPT20H-220ENST00000490716 DISC1C4P0D8 188 aa6.89□□□□□ -1.31
SUPT20H-220ENST00000490716 OR2J3O76001 311 aa6.89□□□□□ -1.31
SUPT20H-220ENST00000490716 TMEM190Q8WZ59 177 aa6.89□□□□□ -1.31
SUPT20H-220ENST00000490716 C17orf77Q96MU5 243 aa6.89□□□□□ -1.31
SUPT20H-220ENST00000490716 RBM7Q9Y580 266 aaKnown RBP6.89□□□□□ -1.31
SUPT20H-220ENST00000490716 A0A0B4J2A0 478 aa6.89□□□□□ -1.31
SUPT20H-220ENST00000490716 IL7P13232 177 aa6.89□□□□□ -1.31
SUPT20H-220ENST00000490716 GP9P14770 177 aa6.89□□□□□ -1.31
SUPT20H-220ENST00000490716 TMEM128Q5BJH2 165 aa6.89□□□□□ -1.31
SUPT20H-220ENST00000490716 BSCL2Q96G97 398 aaPredicted RBP6.89□□□□□ -1.31
SUPT20H-220ENST00000490716 CXorf58Q96LI9 332 aa6.89□□□□□ -1.31
SUPT20H-220ENST00000490716 SLC25A21Q9BQT8 299 aaPredicted RBP6.89□□□□□ -1.31
SUPT20H-220ENST00000490716 SHPKQ9UHJ6 478 aa6.89□□□□□ -1.31
SUPT20H-220ENST00000490716 IGKV1D-37A0A075B6S9 117 aa6.89□□□□□ -1.31
SUPT20H-220ENST00000490716 OR5B12Q96R08 314 aa6.89□□□□□ -1.31
SUPT20H-220ENST00000490716 TSC22D3Q99576 134 aa6.89□□□□□ -1.31
SUPT20H-220ENST00000490716 FAM110AQ9BQ89 295 aa6.89□□□□□ -1.31
SUPT20H-220ENST00000490716 RGS5O15539 181 aa6.88□□□□□ -1.31
SUPT20H-220ENST00000490716 TGOLN2O43493 480 aa6.88□□□□□ -1.31
SUPT20H-220ENST00000490716 TMEM116Q8NCL8 245 aa6.88□□□□□ -1.31
SUPT20H-220ENST00000490716 OR4D5Q8NGN0 318 aa6.88□□□□□ -1.31
SUPT20H-220ENST00000490716 CITED4Q96RK1 184 aa6.88□□□□□ -1.31
SUPT20H-220ENST00000490716 VSIRQ9H7M9 311 aa6.88□□□□□ -1.31
SUPT20H-220ENST00000490716 GGCTO75223 188 aaKnown RBP6.88□□□□□ -1.31
SUPT20H-220ENST00000490716 OR1L6Q8NGR2 347 aa6.88□□□□□ -1.31
SUPT20H-220ENST00000490716 SFT2D2O95562 160 aa6.88□□□□□ -1.31
SUPT20H-220ENST00000490716 SPCS3P61009 180 aa6.88□□□□□ -1.31
SUPT20H-220ENST00000490716 CCDC71LQ8N9Z2 235 aa6.88□□□□□ -1.31
SUPT20H-220ENST00000490716 C7orf50Q9BRJ6 194 aaKnown RBP6.88□□□□□ -1.31
SUPT20H-220ENST00000490716 PRR13Q9NZ81 148 aa6.88□□□□□ -1.31
SUPT20H-220ENST00000490716 NAP1L6A6NFF2 107 aa6.87□□□□□ -1.31
SUPT20H-220ENST00000490716 NDUFA4O00483 81 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms