RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 PRR20BP86481 221 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 PRR20AP86496 221 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 CATR1Q13166 79 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 AADACL3Q5VUY0 350 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 SPSB3Q6PJ21 355 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 LILRB2Q8N423 598 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 STPG3Q8N7X2 389 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 OR1L8Q8NGR8 309 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 OR5B3Q8NH48 314 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 PHLDA1Q8WV24 401 aaPredicted RBP11.41□□□□□ -0.58
COL2A1-207ENST00000490609 GALNT14Q96FL9 552 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 ATP6V0BQ99437 205 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 C15orf62A8K5M9 175 aa11.4□□□□□ -0.58
COL2A1-207ENST00000490609 I3L2K1 104 aa11.4□□□□□ -0.58
COL2A1-207ENST00000490609 KRASP01116 189 aa11.4□□□□□ -0.58
COL2A1-207ENST00000490609 RLN1P04808 185 aa11.4□□□□□ -0.58
COL2A1-207ENST00000490609 NAT1P18440 290 aa11.4□□□□□ -0.58
COL2A1-207ENST00000490609 G6PCP35575 357 aa11.4□□□□□ -0.58
COL2A1-207ENST00000490609 THOC7Q6I9Y2 204 aaKnown RBP11.4□□□□□ -0.58
COL2A1-207ENST00000490609 LYSMD2Q8IV50 215 aa11.4□□□□□ -0.58
COL2A1-207ENST00000490609 CD300LFQ8TDQ1 290 aa11.4□□□□□ -0.58
COL2A1-207ENST00000490609 MOB3AQ96BX8 217 aa11.4□□□□□ -0.58
COL2A1-207ENST00000490609 OR10C1Q96KK4 312 aa11.4□□□□□ -0.58
COL2A1-207ENST00000490609 C20orf24Q9BUV8 137 aa11.4□□□□□ -0.58
COL2A1-207ENST00000490609 OR51B2Q9Y5P1 312 aa11.4□□□□□ -0.58
COL2A1-207ENST00000490609 IGHV3-49A0A0A0MS15 119 aa11.39□□□□□ -0.59
COL2A1-207ENST00000490609 IGHV7-4-1A0A0J9YVY3 117 aa11.39□□□□□ -0.59
COL2A1-207ENST00000490609 IGKV1-39P01597 117 aa11.39□□□□□ -0.59
COL2A1-207ENST00000490609 IGKV1D-39P04432 117 aa11.39□□□□□ -0.59
COL2A1-207ENST00000490609 LGALS9CQ6DKI2 356 aa11.39□□□□□ -0.59
COL2A1-207ENST00000490609 LAMTOR1Q6IAA8 161 aa11.39□□□□□ -0.59
COL2A1-207ENST00000490609 HSD17B13Q7Z5P4 300 aaPredicted RBP11.39□□□□□ -0.59
COL2A1-207ENST00000490609 FCGR1BQ92637 280 aa11.39□□□□□ -0.59
COL2A1-207ENST00000490609 LSM10Q969L4 123 aaKnown RBP11.39□□□□□ -0.59
COL2A1-207ENST00000490609 DGCR14Q96DF8 476 aaKnown RBP11.39□□□□□ -0.59
COL2A1-207ENST00000490609 FXYD6Q9H0Q3 95 aa11.39□□□□□ -0.59
COL2A1-207ENST00000490609 TMEM14BQ9NUH8 114 aa11.39□□□□□ -0.59
COL2A1-207ENST00000490609 OR4C46A6NHA9 309 aa11.38□□□□□ -0.59
COL2A1-207ENST00000490609 XRCC3O43542 346 aa11.38□□□□□ -0.59
COL2A1-207ENST00000490609 PMP2P02689 132 aa11.38□□□□□ -0.59
COL2A1-207ENST00000490609 NANOS2P60321 138 aaKnown RBP11.38□□□□□ -0.59
COL2A1-207ENST00000490609 ZNF2Q9BSG1 426 aaPredicted RBP11.38□□□□□ -0.59
COL2A1-207ENST00000490609 RHPN1-AS1Q9BWJ2 59 aa11.38□□□□□ -0.59
COL2A1-207ENST00000490609 HINT2Q9BX68 163 aa11.38□□□□□ -0.59
COL2A1-207ENST00000490609 VCX3BQ9H321 246 aa11.38□□□□□ -0.59
COL2A1-207ENST00000490609 EHFQ9NZC4 300 aa11.38□□□□□ -0.59
COL2A1-207ENST00000490609 KLK5Q9Y337 293 aaPredicted RBP11.38□□□□□ -0.59
COL2A1-207ENST00000490609 LOC100506127A0A0U1RQW1 187 aa11.37□□□□□ -0.59
COL2A1-207ENST00000490609 IGHV3-48P01763 117 aa11.37□□□□□ -0.59
COL2A1-207ENST00000490609 APOHP02749 345 aaPredicted RBP11.37□□□□□ -0.59
COL2A1-207ENST00000490609 CBX5P45973 191 aa11.37□□□□□ -0.59
COL2A1-207ENST00000490609 UBAC2Q8NBM4 344 aa11.37□□□□□ -0.59
COL2A1-207ENST00000490609 OR1P1Q8NH06 330 aa11.37□□□□□ -0.59
COL2A1-207ENST00000490609 CSTL1Q9H114 145 aa11.37□□□□□ -0.59
COL2A1-207ENST00000490609 DIABLOQ9NR28 239 aa11.37□□□□□ -0.59
COL2A1-207ENST00000490609 IGHV3OR16-13A0A075B7E8 117 aa11.36□□□□□ -0.59
COL2A1-207ENST00000490609 IGHV3-74A0A0B4J1X5 117 aa11.36□□□□□ -0.59
COL2A1-207ENST00000490609 GIG44P09565 113 aaPredicted RBP11.36□□□□□ -0.59
COL2A1-207ENST00000490609 Q56UQ5 140 aa11.36□□□□□ -0.59
COL2A1-207ENST00000490609 FAM24BQ8N5W8 94 aa11.36□□□□□ -0.59
COL2A1-207ENST00000490609 TMEM116Q8NCL8 245 aa11.36□□□□□ -0.59
COL2A1-207ENST00000490609 SEC22AQ96IW7 307 aa11.36□□□□□ -0.59
COL2A1-207ENST00000490609 YTHDF1Q9BYJ9 559 aaKnown RBP11.36□□□□□ -0.59
COL2A1-207ENST00000490609 NXF2Q9GZY0 626 aaKnown RBP11.36□□□□□ -0.59
COL2A1-207ENST00000490609 DNAH11Q96DT5 4516 aa11.36□□□□□ -0.59
COL2A1-207ENST00000490609 C15orf61A6NNL5 157 aa11.35□□□□□ -0.59
COL2A1-207ENST00000490609 TFPI2P48307 235 aa11.35□□□□□ -0.59
COL2A1-207ENST00000490609 HERV-K104P61576 105 aa11.35□□□□□ -0.59
COL2A1-207ENST00000490609 GBGT1Q8N5D6 347 aa11.35□□□□□ -0.59
COL2A1-207ENST00000490609 SLC25A46Q96AG3 418 aa11.35□□□□□ -0.59
COL2A1-207ENST00000490609 RARRES2Q99969 163 aa11.35□□□□□ -0.59
COL2A1-207ENST00000490609 IGKV3-7A0A075B6H7 116 aa11.34□□□□□ -0.59
COL2A1-207ENST00000490609 MPTX1A8MV57 137 aa11.34□□□□□ -0.59
COL2A1-207ENST00000490609 GPR31O00270 319 aa11.34□□□□□ -0.59
COL2A1-207ENST00000490609 DEFB4AO15263 64 aa11.34□□□□□ -0.59
COL2A1-207ENST00000490609 RPS19P39019 145 aaKnown RBP11.34□□□□□ -0.59
COL2A1-207ENST00000490609 TAS2R20P59543 309 aa11.34□□□□□ -0.59
COL2A1-207ENST00000490609 ERVK-16P61578 105 aa11.34□□□□□ -0.59
COL2A1-207ENST00000490609 ZNF114Q8NC26 417 aa11.34□□□□□ -0.59
COL2A1-207ENST00000490609 OR11H2Q8NH07 326 aa11.34□□□□□ -0.59
COL2A1-207ENST00000490609 GATAD1Q8WUU5 269 aa11.34□□□□□ -0.59
COL2A1-207ENST00000490609 ST8SIA2Q92186 375 aa11.34□□□□□ -0.59
COL2A1-207ENST00000490609 C11orf68Q9H3H3 251 aaKnown RBP11.34□□□□□ -0.59
COL2A1-207ENST00000490609 VSIRQ9H7M9 311 aa11.34□□□□□ -0.59
COL2A1-207ENST00000490609 PRNDQ9UKY0 176 aa11.34□□□□□ -0.59
COL2A1-207ENST00000490609 TRAV14DV4A0A0A6YYC5 116 aa11.33□□□□□ -0.6
COL2A1-207ENST00000490609 NUPL2O15504 423 aaKnown RBP11.33□□□□□ -0.6
COL2A1-207ENST00000490609 CYB5BO43169 146 aa11.33□□□□□ -0.6
COL2A1-207ENST00000490609 MT-CO2P00403 227 aa11.33□□□□□ -0.6
COL2A1-207ENST00000490609 IZUMO4Q1ZYL8 232 aa11.33□□□□□ -0.6
COL2A1-207ENST00000490609 PHLDA2Q53GA4 152 aa11.33□□□□□ -0.6
COL2A1-207ENST00000490609 TOMM20LQ6UXN7 152 aa11.33□□□□□ -0.6
COL2A1-207ENST00000490609 TXN2Q99757 166 aa11.33□□□□□ -0.6
COL2A1-207ENST00000490609 ZFAND3Q9H8U3 227 aa11.33□□□□□ -0.6
COL2A1-207ENST00000490609 IFT46Q9NQC8 304 aa11.33□□□□□ -0.6
COL2A1-207ENST00000490609 APLNQ9ULZ1 77 aa11.33□□□□□ -0.6
COL2A1-207ENST00000490609 SNAPC5O75971 98 aa11.32□□□□□ -0.6
COL2A1-207ENST00000490609 P0C879 139 aa11.32□□□□□ -0.6
COL2A1-207ENST00000490609 HLA-DMAP28067 261 aa11.32□□□□□ -0.6
COL2A1-207ENST00000490609 HRH1P35367 487 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms