RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 ZNF773Q6PK81 442 aa14.32□□□□□ -0.12
UPK3B-205ENST00000490360 CADM3Q8N126 398 aa14.32□□□□□ -0.12
UPK3B-205ENST00000490360 NUDCD2Q8WVJ2 157 aa14.32□□□□□ -0.12
UPK3B-205ENST00000490360 BORCS5Q969J3 196 aa14.32□□□□□ -0.12
UPK3B-205ENST00000490360 TXN2Q99757 166 aa14.32□□□□□ -0.12
UPK3B-205ENST00000490360 DUSP21Q9H596 190 aa14.32□□□□□ -0.12
UPK3B-205ENST00000490360 NDUFA4L2Q9NRX3 87 aa14.32□□□□□ -0.12
UPK3B-205ENST00000490360 TMEM235A6NFC5 223 aa14.31□□□□□ -0.12
UPK3B-205ENST00000490360 RGS10O43665 173 aa14.31□□□□□ -0.12
UPK3B-205ENST00000490360 EIF4EP06730 217 aaKnown RBP14.31□□□□□ -0.12
UPK3B-205ENST00000490360 FCGR2CP31995 323 aa14.31□□□□□ -0.12
UPK3B-205ENST00000490360 OGFRL1Q5TC84 451 aaPredicted RBP14.31□□□□□ -0.12
UPK3B-205ENST00000490360 STHQ8IWL8 128 aa14.31□□□□□ -0.12
UPK3B-205ENST00000490360 GINS3Q9BRX5 216 aa14.31□□□□□ -0.12
UPK3B-205ENST00000490360 IGKV3-7A0A075B6H7 116 aa14.3□□□□□ -0.12
UPK3B-205ENST00000490360 IGHV4-28A0A0C4DH34 117 aa14.3□□□□□ -0.12
UPK3B-205ENST00000490360 DNASE2O00115 360 aaPredicted RBP14.3□□□□□ -0.12
UPK3B-205ENST00000490360 PPYP01298 95 aa14.3□□□□□ -0.12
UPK3B-205ENST00000490360 AMBPP02760 352 aa14.3□□□□□ -0.12
UPK3B-205ENST00000490360 MORN3Q6PF18 240 aaPredicted RBP14.3□□□□□ -0.12
UPK3B-205ENST00000490360 Q6ZTC4 211 aa14.3□□□□□ -0.12
UPK3B-205ENST00000490360 TCF24Q7RTU0 167 aa14.3□□□□□ -0.12
UPK3B-205ENST00000490360 GBGT1Q8N5D6 347 aa14.3□□□□□ -0.12
UPK3B-205ENST00000490360 TMEM56Q96MV1 263 aa14.3□□□□□ -0.12
UPK3B-205ENST00000490360 SLC5A7Q9GZV3 580 aa14.3□□□□□ -0.12
UPK3B-205ENST00000490360 DNAH17Q9UFH2 4485 aa14.3□□□□□ -0.12
UPK3B-205ENST00000490360 IGHV3-21A0A0B4J1V1 117 aa14.29□□□□□ -0.12
UPK3B-205ENST00000490360 RTL8CO15255 209 aa14.29□□□□□ -0.12
UPK3B-205ENST00000490360 RBMY1A1P0DJD3 496 aaKnown RBP14.29□□□□□ -0.12
UPK3B-205ENST00000490360 RBMY1CP0DJD4 496 aa14.29□□□□□ -0.12
UPK3B-205ENST00000490360 SPP1P10451 314 aa14.29□□□□□ -0.12
UPK3B-205ENST00000490360 MFAP4P55083 255 aa14.29□□□□□ -0.12
UPK3B-205ENST00000490360 RBMY1FQ15415 496 aaKnown RBP14.29□□□□□ -0.12
UPK3B-205ENST00000490360 LGALS9BQ3B8N2 356 aa14.29□□□□□ -0.12
UPK3B-205ENST00000490360 DUSP18Q8NEJ0 188 aa14.29□□□□□ -0.12
UPK3B-205ENST00000490360 OR1P1Q8NH06 330 aa14.29□□□□□ -0.12
UPK3B-205ENST00000490360 GIMAP1Q8WWP7 306 aa14.29□□□□□ -0.12
UPK3B-205ENST00000490360 FKBP11Q9NYL4 201 aa14.29□□□□□ -0.12
UPK3B-205ENST00000490360 IGHV3-49A0A0A0MS15 119 aa14.28□□□□□ -0.12
UPK3B-205ENST00000490360 MARCH11A6NNE9 402 aa14.28□□□□□ -0.12
UPK3B-205ENST00000490360 ZNF705EA8MWA4 302 aaPredicted RBP14.28□□□□□ -0.12
UPK3B-205ENST00000490360 SNAPC5O75971 98 aa14.28□□□□□ -0.12
UPK3B-205ENST00000490360 DEFB131AP59861 70 aa14.28□□□□□ -0.12
UPK3B-205ENST00000490360 PRSS48Q7RTY5 328 aa14.28□□□□□ -0.12
UPK3B-205ENST00000490360 BEST4Q8NFU0 473 aa14.28□□□□□ -0.12
UPK3B-205ENST00000490360 HINT2Q9BX68 163 aa14.28□□□□□ -0.12
UPK3B-205ENST00000490360 NXF2Q9GZY0 626 aaKnown RBP14.28□□□□□ -0.12
UPK3B-205ENST00000490360 MS4A6AQ9H2W1 248 aa14.28□□□□□ -0.12
UPK3B-205ENST00000490360 SSX5O60225 188 aa14.27□□□□□ -0.13
UPK3B-205ENST00000490360 AADACL3Q5VUY0 350 aa14.27□□□□□ -0.13
UPK3B-205ENST00000490360 OR51H1Q8NH63 302 aa14.27□□□□□ -0.13
UPK3B-205ENST00000490360 NDUFAF3Q9BU61 184 aa14.27□□□□□ -0.13
UPK3B-205ENST00000490360 VSIRQ9H7M9 311 aa14.27□□□□□ -0.13
UPK3B-205ENST00000490360 OR51B2Q9Y5P1 312 aa14.27□□□□□ -0.13
UPK3B-205ENST00000490360 ABCA13Q86UQ4 5058 aa14.27□□□□□ -0.13
UPK3B-205ENST00000490360 TRDV1A0A1B0GX56 115 aa14.26□□□□□ -0.13
UPK3B-205ENST00000490360 ST8SIA3O43173 380 aa14.26□□□□□ -0.13
UPK3B-205ENST00000490360 LEMD1Q68G75 181 aa14.26□□□□□ -0.13
UPK3B-205ENST00000490360 ZNF414Q96IQ9 312 aa14.26□□□□□ -0.13
UPK3B-205ENST00000490360 TMEM231Q9H6L2 316 aa14.26□□□□□ -0.13
UPK3B-205ENST00000490360 PRNDQ9UKY0 176 aa14.26□□□□□ -0.13
UPK3B-205ENST00000490360 PKD1P98161 4303 aa14.25□□□□□ -0.13
UPK3B-205ENST00000490360 DEFB131BA0A096LNP1 70 aa14.25□□□□□ -0.13
UPK3B-205ENST00000490360 RPL11P62913 178 aaKnown RBP14.25□□□□□ -0.13
UPK3B-205ENST00000490360 SOHLH1Q5JUK2 328 aa14.25□□□□□ -0.13
UPK3B-205ENST00000490360 ZNF818PQ6ZRF7 136 aa14.25□□□□□ -0.13
UPK3B-205ENST00000490360 SLC25A46Q96AG3 418 aa14.25□□□□□ -0.13
UPK3B-205ENST00000490360 NDUFB11Q9NX14 153 aa14.25□□□□□ -0.13
UPK3B-205ENST00000490360 IGHV3OR16-13A0A075B7E8 117 aa14.24□□□□□ -0.13
UPK3B-205ENST00000490360 IGHV3-74A0A0B4J1X5 117 aa14.24□□□□□ -0.13
UPK3B-205ENST00000490360 NOTOA8MTQ0 251 aa14.24□□□□□ -0.13
UPK3B-205ENST00000490360 GNG7O60262 68 aa14.24□□□□□ -0.13
UPK3B-205ENST00000490360 GIG44P09565 113 aaPredicted RBP14.24□□□□□ -0.13
UPK3B-205ENST00000490360 F2RP25116 425 aa14.24□□□□□ -0.13
UPK3B-205ENST00000490360 ZNF367Q7RTV3 350 aa14.24□□□□□ -0.13
UPK3B-205ENST00000490360 TRPT1Q86TN4 253 aaKnown RBP14.24□□□□□ -0.13
UPK3B-205ENST00000490360 HOGA1Q86XE5 327 aa14.24□□□□□ -0.13
UPK3B-205ENST00000490360 TSC22D3Q99576 134 aa14.24□□□□□ -0.13
UPK3B-205ENST00000490360 TBC1D24Q9ULP9 559 aa14.24□□□□□ -0.13
UPK3B-205ENST00000490360 DNAH11Q96DT5 4516 aa14.23□□□□□ -0.13
UPK3B-205ENST00000490360 ELOA3CA0A087WX78 387 aaPredicted RBP14.23□□□□□ -0.13
UPK3B-205ENST00000490360 I3L2K1 104 aa14.23□□□□□ -0.13
UPK3B-205ENST00000490360 NPY1RP25929 384 aa14.23□□□□□ -0.13
UPK3B-205ENST00000490360 FXYD4P59646 89 aa14.23□□□□□ -0.13
UPK3B-205ENST00000490360 TBCEQ15813 527 aaPredicted RBP14.23□□□□□ -0.13
UPK3B-205ENST00000490360 TPRA1Q86W33 373 aa14.23□□□□□ -0.13
UPK3B-205ENST00000490360 ST8SIA2Q92186 375 aa14.23□□□□□ -0.13
UPK3B-205ENST00000490360 GRAMD2BQ96HH9 432 aa14.23□□□□□ -0.13
UPK3B-205ENST00000490360 TMEM14BQ9NUH8 114 aa14.23□□□□□ -0.13
UPK3B-205ENST00000490360 X6R8D5 127 aa14.23□□□□□ -0.13
UPK3B-205ENST00000490360 DYNC1H1Q14204 4646 aaKnown RBP14.22□□□□□ -0.13
UPK3B-205ENST00000490360 M0R2N4 97 aa14.22□□□□□ -0.13
UPK3B-205ENST00000490360 EBAG9O00559 213 aa14.22□□□□□ -0.13
UPK3B-205ENST00000490360 KRASP01116 189 aa14.22□□□□□ -0.13
UPK3B-205ENST00000490360 HERV-K104P61576 105 aa14.22□□□□□ -0.13
UPK3B-205ENST00000490360 ZNF114Q8NC26 417 aa14.22□□□□□ -0.13
UPK3B-205ENST00000490360 TSPAN14Q8NG11 270 aa14.22□□□□□ -0.13
UPK3B-205ENST00000490360 MISP3Q96FF7 219 aa14.22□□□□□ -0.13
UPK3B-205ENST00000490360 AGRNO00468 2067 aa14.21□□□□□ -0.13
UPK3B-205ENST00000490360 A0A1W2PS18 150 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms