RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 LGI3Q8N145 548 aa11.09□□□□□ -0.63
SRGAP3-208ENST00000490348 NECAP1Q8NC96 275 aa11.09□□□□□ -0.63
SRGAP3-208ENST00000490348 OR1N2Q8NGR9 330 aa11.09□□□□□ -0.63
SRGAP3-208ENST00000490348 USMG5Q96IX5 58 aa11.09□□□□□ -0.63
SRGAP3-208ENST00000490348 PRKDCP78527 4128 aaKnown RBP11.09□□□□□ -0.63
SRGAP3-208ENST00000490348 A0A0G2JLM5 398 aa11.08□□□□□ -0.64
SRGAP3-208ENST00000490348 HLA-AP01891 365 aaKnown RBP11.08□□□□□ -0.64
SRGAP3-208ENST00000490348 SRPXP78539 464 aa11.08□□□□□ -0.64
SRGAP3-208ENST00000490348 ZNF616Q08AN1 781 aa11.08□□□□□ -0.64
SRGAP3-208ENST00000490348 DCTN2Q13561 401 aaKnown RBP11.08□□□□□ -0.64
SRGAP3-208ENST00000490348 HSD17B13Q7Z5P4 300 aaPredicted RBP11.08□□□□□ -0.64
SRGAP3-208ENST00000490348 NUDT15Q9NV35 164 aa11.08□□□□□ -0.64
SRGAP3-208ENST00000490348 FBXL7Q9UJT9 491 aa11.08□□□□□ -0.64
SRGAP3-208ENST00000490348 F11RQ9Y624 299 aaKnown RBP11.08□□□□□ -0.64
SRGAP3-208ENST00000490348 TRAV6A0A075B6T7 132 aa11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 DEFA4P12838 97 aa11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 PDLIM3Q53GG5 364 aaPredicted RBP11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 OR2C3Q8N628 320 aa11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 S4R3C0 116 aa11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 ANKRD34BA5PLL1 514 aa11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 MFSD2BA6NFX1 497 aa11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 G3V4G9 280 aa11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 DHFRP00374 187 aa11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 IFNA17P01571 189 aa11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 CD33P20138 364 aa11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 MECP2P51608 486 aaKnown RBP11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 SLURP1P55000 103 aa11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 RAB25P57735 213 aa11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 ATP5G2Q06055 141 aa11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 EXOSC2Q13868 293 aaKnown RBP11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 C11orf87Q6NUJ2 197 aa11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 LYG2Q86SG7 212 aa11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 OR52B4Q8NGK2 314 aa11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 PLEKHA3Q9HB20 300 aa11.07□□□□□ -0.64
SRGAP3-208ENST00000490348 FAM240BA0A1B0GVZ2 78 aa11.06□□□□□ -0.64
SRGAP3-208ENST00000490348 DUXBA0A1W2PPF3 345 aa11.06□□□□□ -0.64
SRGAP3-208ENST00000490348 INS-IGF2F8WCM5 200 aa11.06□□□□□ -0.64
SRGAP3-208ENST00000490348 LINC01619G3V211 115 aa11.06□□□□□ -0.64
SRGAP3-208ENST00000490348 NXPH3O95157 252 aa11.06□□□□□ -0.64
SRGAP3-208ENST00000490348 IGHV3-23P01764 117 aa11.06□□□□□ -0.64
SRGAP3-208ENST00000490348 HSPB1P04792 205 aaKnown RBP11.06□□□□□ -0.64
SRGAP3-208ENST00000490348 SULT1A3P0DMM9 295 aa11.06□□□□□ -0.64
SRGAP3-208ENST00000490348 SULT1A4P0DMN0 295 aa11.06□□□□□ -0.64
SRGAP3-208ENST00000490348 IGLL1P15814 213 aa11.06□□□□□ -0.64
SRGAP3-208ENST00000490348 C4orf46Q504U0 113 aa11.06□□□□□ -0.64
SRGAP3-208ENST00000490348 OXLD1Q5BKU9 147 aa11.06□□□□□ -0.64
SRGAP3-208ENST00000490348 MZT2BQ6NZ67 158 aa11.06□□□□□ -0.64
SRGAP3-208ENST00000490348 ZNF114Q8NC26 417 aa11.06□□□□□ -0.64
SRGAP3-208ENST00000490348 OR52E5Q8NH55 327 aa11.06□□□□□ -0.64
SRGAP3-208ENST00000490348 CCDC140Q96MF4 163 aa11.06□□□□□ -0.64
SRGAP3-208ENST00000490348 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.05□□□□□ -0.64
SRGAP3-208ENST00000490348 PITX3O75364 302 aa11.05□□□□□ -0.64
SRGAP3-208ENST00000490348 DUS4LO95620 317 aaKnown RBP11.05□□□□□ -0.64
SRGAP3-208ENST00000490348 OR8U8P0C7N1 319 aa11.05□□□□□ -0.64
SRGAP3-208ENST00000490348 HIST1H1BP16401 226 aaKnown RBP11.05□□□□□ -0.64
SRGAP3-208ENST00000490348 HOXD3P31249 432 aaPredicted RBP11.05□□□□□ -0.64
SRGAP3-208ENST00000490348 SPCS3P61009 180 aa11.05□□□□□ -0.64
SRGAP3-208ENST00000490348 SMCO1Q147U7 214 aa11.05□□□□□ -0.64
SRGAP3-208ENST00000490348 SAMD5Q5TGI4 173 aa11.05□□□□□ -0.64
SRGAP3-208ENST00000490348 NRARPQ7Z6K4 114 aa11.05□□□□□ -0.64
SRGAP3-208ENST00000490348 C1QL4Q86Z23 238 aa11.05□□□□□ -0.64
SRGAP3-208ENST00000490348 OR1P1Q8NH06 330 aa11.05□□□□□ -0.64
SRGAP3-208ENST00000490348 DLX4Q92988 240 aaPredicted RBP11.05□□□□□ -0.64
SRGAP3-208ENST00000490348 PEF1Q9UBV8 284 aaKnown RBP11.05□□□□□ -0.64
SRGAP3-208ENST00000490348 A0A1B0GU03 582 aa11.04□□□□□ -0.64
SRGAP3-208ENST00000490348 MPTX1A8MV57 137 aa11.04□□□□□ -0.64
SRGAP3-208ENST00000490348 K7EIM0 57 aa11.04□□□□□ -0.64
SRGAP3-208ENST00000490348 BMPR1BO00238 502 aa11.04□□□□□ -0.64
SRGAP3-208ENST00000490348 ADAP1O75689 374 aa11.04□□□□□ -0.64
SRGAP3-208ENST00000490348 HOXB5P09067 269 aa11.04□□□□□ -0.64
SRGAP3-208ENST00000490348 GGNBP1Q5YKI7 109 aa11.04□□□□□ -0.64
SRGAP3-208ENST00000490348 SLC25A24Q6NUK1 477 aa11.04□□□□□ -0.64
SRGAP3-208ENST00000490348 MITD1Q8WV92 249 aa11.04□□□□□ -0.64
SRGAP3-208ENST00000490348 DCUN1D4Q92564 292 aa11.04□□□□□ -0.64
SRGAP3-208ENST00000490348 DPF1Q92782 380 aa11.04□□□□□ -0.64
SRGAP3-208ENST00000490348 PDCD10Q9BUL8 212 aa11.04□□□□□ -0.64
SRGAP3-208ENST00000490348 RANGRFQ9HD47 186 aaPredicted RBP11.04□□□□□ -0.64
SRGAP3-208ENST00000490348 HSPB7Q9UBY9 170 aa11.04□□□□□ -0.64
SRGAP3-208ENST00000490348 IGHV3-21A0A0B4J1V1 117 aa11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 PPP5D1E7EU14 171 aa11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 H2AFB2P0C5Z0 115 aa11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 HOXA1P49639 335 aaPredicted RBP11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 TNFRSF9Q07011 255 aa11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 BSXQ3C1V8 233 aa11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 PVRIGQ6DKI7 326 aa11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 DUSP18Q8NEJ0 188 aa11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 ZNF502Q8TBZ5 544 aa11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 RCC1LQ96I51 464 aaKnown RBP11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 SEC22CQ9BRL7 303 aa11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 TMED3Q9Y3Q3 217 aa11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 F8W735 103 aaPredicted RBP11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 RNASE2P10153 161 aaKnown RBP11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 ERHP84090 104 aaKnown RBP11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 COQ8AQ8NI60 647 aa11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 ENKURQ8TC29 256 aa11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 TMEM170AQ8WVE7 144 aa11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 PPP1R14BQ96C90 147 aa11.03□□□□□ -0.64
SRGAP3-208ENST00000490348 PIGBOS1A0A0B4J2F0 54 aa11.02□□□□□ -0.65
SRGAP3-208ENST00000490348 I3L2K1 104 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms