RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 MYCNOSP40205 109 aa11.14□□□□□ -0.63
HLA-F-229ENST00000489502 HOXA1P49639 335 aaPredicted RBP11.14□□□□□ -0.63
HLA-F-229ENST00000489502 RUNX1Q01196 453 aa11.14□□□□□ -0.63
HLA-F-229ENST00000489502 FHL3Q13643 280 aa11.14□□□□□ -0.63
HLA-F-229ENST00000489502 C11orf87Q6NUJ2 197 aa11.14□□□□□ -0.63
HLA-F-229ENST00000489502 LYG2Q86SG7 212 aa11.14□□□□□ -0.63
HLA-F-229ENST00000489502 FAM223AQ8IWN6 122 aa11.14□□□□□ -0.63
HLA-F-229ENST00000489502 OR11H1Q8NG94 326 aa11.14□□□□□ -0.63
HLA-F-229ENST00000489502 OR52B4Q8NGK2 314 aa11.14□□□□□ -0.63
HLA-F-229ENST00000489502 PDCD10Q9BUL8 212 aa11.14□□□□□ -0.63
HLA-F-229ENST00000489502 FBXL7Q9UJT9 491 aa11.14□□□□□ -0.63
HLA-F-229ENST00000489502 A0A0G2JLM5 398 aa11.13□□□□□ -0.63
HLA-F-229ENST00000489502 ANKRD34BA5PLL1 514 aa11.13□□□□□ -0.63
HLA-F-229ENST00000489502 MFSD2BA6NFX1 497 aa11.13□□□□□ -0.63
HLA-F-229ENST00000489502 NDUFB8O95169 186 aa11.13□□□□□ -0.63
HLA-F-229ENST00000489502 DHFRP00374 187 aa11.13□□□□□ -0.63
HLA-F-229ENST00000489502 TRBV12-3P01733 135 aa11.13□□□□□ -0.63
HLA-F-229ENST00000489502 IGHV3-23P01764 117 aa11.13□□□□□ -0.63
HLA-F-229ENST00000489502 HOXB5P09067 269 aa11.13□□□□□ -0.63
HLA-F-229ENST00000489502 SULT1A3P0DMM9 295 aa11.13□□□□□ -0.63
HLA-F-229ENST00000489502 SULT1A4P0DMN0 295 aa11.13□□□□□ -0.63
HLA-F-229ENST00000489502 CD33P20138 364 aa11.13□□□□□ -0.63
HLA-F-229ENST00000489502 MFAP2P55001 183 aa11.13□□□□□ -0.63
HLA-F-229ENST00000489502 ZNF616Q08AN1 781 aa11.13□□□□□ -0.63
HLA-F-229ENST00000489502 C15orf32Q32M92 178 aa11.13□□□□□ -0.63
HLA-F-229ENST00000489502 HSD17B13Q7Z5P4 300 aaPredicted RBP11.13□□□□□ -0.63
HLA-F-229ENST00000489502 NECAP1Q8NC96 275 aa11.13□□□□□ -0.63
HLA-F-229ENST00000489502 OR1N2Q8NGR9 330 aa11.13□□□□□ -0.63
HLA-F-229ENST00000489502 SEC22CQ9BRL7 303 aa11.13□□□□□ -0.63
HLA-F-229ENST00000489502 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.13□□□□□ -0.63
HLA-F-229ENST00000489502 F11RQ9Y624 299 aaKnown RBP11.13□□□□□ -0.63
HLA-F-229ENST00000489502 DUXBA0A1W2PPF3 345 aa11.12□□□□□ -0.63
HLA-F-229ENST00000489502 H2AFB2P0C5Z0 115 aa11.12□□□□□ -0.63
HLA-F-229ENST00000489502 SLURP1P55000 103 aa11.12□□□□□ -0.63
HLA-F-229ENST00000489502 ATP5G2Q06055 141 aa11.12□□□□□ -0.63
HLA-F-229ENST00000489502 SMCO1Q147U7 214 aa11.12□□□□□ -0.63
HLA-F-229ENST00000489502 AARDQ4LEZ3 155 aa11.12□□□□□ -0.63
HLA-F-229ENST00000489502 NRARPQ7Z6K4 114 aa11.12□□□□□ -0.63
HLA-F-229ENST00000489502 OR2C3Q8N628 320 aa11.12□□□□□ -0.63
HLA-F-229ENST00000489502 LRTM2Q8N967 370 aa11.12□□□□□ -0.63
HLA-F-229ENST00000489502 USMG5Q96IX5 58 aa11.12□□□□□ -0.63
HLA-F-229ENST00000489502 IGHV3-21A0A0B4J1V1 117 aa11.11□□□□□ -0.63
HLA-F-229ENST00000489502 LINC01619G3V211 115 aa11.11□□□□□ -0.63
HLA-F-229ENST00000489502 ADAP1O75689 374 aa11.11□□□□□ -0.63
HLA-F-229ENST00000489502 DUS4LO95620 317 aaKnown RBP11.11□□□□□ -0.63
HLA-F-229ENST00000489502 HIST1H1BP16401 226 aaKnown RBP11.11□□□□□ -0.63
HLA-F-229ENST00000489502 DEFA1P59665 94 aa11.11□□□□□ -0.63
HLA-F-229ENST00000489502 DEFA3P59666 94 aa11.11□□□□□ -0.63
HLA-F-229ENST00000489502 GGNBP1Q5YKI7 109 aa11.11□□□□□ -0.63
HLA-F-229ENST00000489502 SLC25A24Q6NUK1 477 aa11.11□□□□□ -0.63
HLA-F-229ENST00000489502 ZNF343Q6P1L6 599 aa11.11□□□□□ -0.63
HLA-F-229ENST00000489502 C1QL4Q86Z23 238 aa11.11□□□□□ -0.63
HLA-F-229ENST00000489502 COQ8AQ8NI60 647 aa11.11□□□□□ -0.63
HLA-F-229ENST00000489502 DPF1Q92782 380 aa11.11□□□□□ -0.63
HLA-F-229ENST00000489502 CCDC140Q96MF4 163 aa11.11□□□□□ -0.63
HLA-F-229ENST00000489502 CEBPZOSA8MTT3 80 aa11.1□□□□□ -0.63
HLA-F-229ENST00000489502 OR8U8P0C7N1 319 aa11.1□□□□□ -0.63
HLA-F-229ENST00000489502 IGLL1P15814 213 aa11.1□□□□□ -0.63
HLA-F-229ENST00000489502 SPCS3P61009 180 aa11.1□□□□□ -0.63
HLA-F-229ENST00000489502 KLK9Q2XQG4 91 aa11.1□□□□□ -0.63
HLA-F-229ENST00000489502 OR1S1Q8NH92 325 aa11.1□□□□□ -0.63
HLA-F-229ENST00000489502 ENY2Q9NPA8 101 aa11.1□□□□□ -0.63
HLA-F-229ENST00000489502 KLK9Q9UKQ9 250 aa11.1□□□□□ -0.63
HLA-F-229ENST00000489502 TMED3Q9Y3Q3 217 aa11.1□□□□□ -0.63
HLA-F-229ENST00000489502 MPTX1A8MV57 137 aa11.09□□□□□ -0.63
HLA-F-229ENST00000489502 PPP5D1E7EU14 171 aa11.09□□□□□ -0.63
HLA-F-229ENST00000489502 G3V4G9 280 aa11.09□□□□□ -0.63
HLA-F-229ENST00000489502 HSPB1P04792 205 aaKnown RBP11.09□□□□□ -0.63
HLA-F-229ENST00000489502 HOXD3P31249 432 aaPredicted RBP11.09□□□□□ -0.63
HLA-F-229ENST00000489502 ERHP84090 104 aaKnown RBP11.09□□□□□ -0.63
HLA-F-229ENST00000489502 TNFRSF9Q07011 255 aa11.09□□□□□ -0.63
HLA-F-229ENST00000489502 ZNF114Q8NC26 417 aa11.09□□□□□ -0.63
HLA-F-229ENST00000489502 OR1P1Q8NH06 330 aa11.09□□□□□ -0.63
HLA-F-229ENST00000489502 OR52E5Q8NH55 327 aa11.09□□□□□ -0.63
HLA-F-229ENST00000489502 MISP3Q96FF7 219 aa11.09□□□□□ -0.63
HLA-F-229ENST00000489502 PEF1Q9UBV8 284 aaKnown RBP11.09□□□□□ -0.63
HLA-F-229ENST00000489502 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.08□□□□□ -0.64
HLA-F-229ENST00000489502 PIGBOS1A0A0B4J2F0 54 aa11.08□□□□□ -0.64
HLA-F-229ENST00000489502 A0A1B0GU03 582 aa11.08□□□□□ -0.64
HLA-F-229ENST00000489502 K7EIM0 57 aa11.08□□□□□ -0.64
HLA-F-229ENST00000489502 BMPR1BO00238 502 aa11.08□□□□□ -0.64
HLA-F-229ENST00000489502 CCSO14618 274 aa11.08□□□□□ -0.64
HLA-F-229ENST00000489502 CYB5BO43169 146 aa11.08□□□□□ -0.64
HLA-F-229ENST00000489502 RNASE2P10153 161 aaKnown RBP11.08□□□□□ -0.64
HLA-F-229ENST00000489502 SPNP16150 400 aa11.08□□□□□ -0.64
HLA-F-229ENST00000489502 PDLIM3Q53GG5 364 aaPredicted RBP11.08□□□□□ -0.64
HLA-F-229ENST00000489502 OXLD1Q5BKU9 147 aa11.08□□□□□ -0.64
HLA-F-229ENST00000489502 CLEC19AQ6UXS0 136 aa11.08□□□□□ -0.64
HLA-F-229ENST00000489502 WFDC9Q8NEX5 89 aa11.08□□□□□ -0.64
HLA-F-229ENST00000489502 ZNF431Q8TF32 576 aaPredicted RBP11.08□□□□□ -0.64
HLA-F-229ENST00000489502 MITD1Q8WV92 249 aa11.08□□□□□ -0.64
HLA-F-229ENST00000489502 DCUN1D4Q92564 292 aa11.08□□□□□ -0.64
HLA-F-229ENST00000489502 DLX4Q92988 240 aaPredicted RBP11.08□□□□□ -0.64
HLA-F-229ENST00000489502 EEF1AKMT3Q96AZ1 226 aa11.08□□□□□ -0.64
HLA-F-229ENST00000489502 RBKSQ9H477 322 aa11.08□□□□□ -0.64
HLA-F-229ENST00000489502 RANGRFQ9HD47 186 aaPredicted RBP11.08□□□□□ -0.64
HLA-F-229ENST00000489502 HEYLQ9NQ87 328 aaPredicted RBP11.08□□□□□ -0.64
HLA-F-229ENST00000489502 ZC4H2Q9NQZ6 224 aa11.08□□□□□ -0.64
HLA-F-229ENST00000489502 HSPB7Q9UBY9 170 aa11.08□□□□□ -0.64
HLA-F-229ENST00000489502 MEGF8Q7Z7M0 2845 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms