RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 SNAPC5O75971 98 aa8.74□□□□□ -1.01
ACTN4-206ENST00000489451 S1PR2O95136 353 aa8.74□□□□□ -1.01
ACTN4-206ENST00000489451 CLEC3BP05452 202 aa8.74□□□□□ -1.01
ACTN4-206ENST00000489451 HIST1H1BP16401 226 aaKnown RBP8.74□□□□□ -1.01
ACTN4-206ENST00000489451 GPR183P32249 361 aa8.74□□□□□ -1.01
ACTN4-206ENST00000489451 LPAR6P43657 344 aa8.74□□□□□ -1.01
ACTN4-206ENST00000489451 MFAP2P55001 183 aa8.74□□□□□ -1.01
ACTN4-206ENST00000489451 TAS2R19P59542 299 aa8.74□□□□□ -1.01
ACTN4-206ENST00000489451 SSBP1Q04837 148 aaKnown RBP8.74□□□□□ -1.01
ACTN4-206ENST00000489451 PHLDA2Q53GA4 152 aa8.74□□□□□ -1.01
ACTN4-206ENST00000489451 OR10W1Q8NGF6 305 aa8.74□□□□□ -1.01
ACTN4-206ENST00000489451 OR52B4Q8NGK2 314 aa8.74□□□□□ -1.01
ACTN4-206ENST00000489451 IL17DQ8TAD2 202 aa8.74□□□□□ -1.01
ACTN4-206ENST00000489451 DIRAS2Q96HU8 199 aa8.74□□□□□ -1.01
ACTN4-206ENST00000489451 ZNF436Q9C0F3 470 aaPredicted RBP8.74□□□□□ -1.01
ACTN4-206ENST00000489451 C6orf62Q9GZU0 229 aaPredicted RBP8.74□□□□□ -1.01
ACTN4-206ENST00000489451 FAM212BQ9NTI7 297 aaPredicted RBP8.74□□□□□ -1.01
ACTN4-206ENST00000489451 TMEM140Q9NV12 185 aa8.74□□□□□ -1.01
ACTN4-206ENST00000489451 VPS13DQ5THJ4 4388 aa8.74□□□□□ -1.01
ACTN4-206ENST00000489451 LOC102724200A0A096LPH7 203 aaPredicted RBP8.73□□□□□ -1.01
ACTN4-206ENST00000489451 CCDC160A6NGH7 325 aa8.73□□□□□ -1.01
ACTN4-206ENST00000489451 KRASP01116 189 aa8.73□□□□□ -1.01
ACTN4-206ENST00000489451 CD3DP04234 171 aa8.73□□□□□ -1.01
ACTN4-206ENST00000489451 SERPINE2P07093 398 aa8.73□□□□□ -1.01
ACTN4-206ENST00000489451 PGAM2P15259 253 aa8.73□□□□□ -1.01
ACTN4-206ENST00000489451 IL18Q14116 193 aa8.73□□□□□ -1.01
ACTN4-206ENST00000489451 FAM106AQ4KMX7 169 aa8.73□□□□□ -1.01
ACTN4-206ENST00000489451 THOC7Q6I9Y2 204 aaKnown RBP8.73□□□□□ -1.01
ACTN4-206ENST00000489451 SLC16A13Q7RTY0 426 aa8.73□□□□□ -1.01
ACTN4-206ENST00000489451 HSD17B13Q7Z5P4 300 aaPredicted RBP8.73□□□□□ -1.01
ACTN4-206ENST00000489451 TBC1D26Q86UD7 250 aa8.73□□□□□ -1.01
ACTN4-206ENST00000489451 TMEM229BQ8NBD8 167 aa8.73□□□□□ -1.01
ACTN4-206ENST00000489451 DYNC2LI1Q8TCX1 351 aa8.73□□□□□ -1.01
ACTN4-206ENST00000489451 ZNF486Q96H40 463 aaPredicted RBP8.73□□□□□ -1.01
ACTN4-206ENST00000489451 TSC22D3Q99576 134 aa8.73□□□□□ -1.01
ACTN4-206ENST00000489451 SRSF8Q9BRL6 282 aaKnown RBP8.73□□□□□ -1.01
ACTN4-206ENST00000489451 QTRT1Q9BXR0 403 aaKnown RBP8.73□□□□□ -1.01
ACTN4-206ENST00000489451 FXYD6Q9H0Q3 95 aa8.73□□□□□ -1.01
ACTN4-206ENST00000489451 FKBP11Q9NYL4 201 aa8.73□□□□□ -1.01
ACTN4-206ENST00000489451 THYN1Q9P016 225 aa8.73□□□□□ -1.01
ACTN4-206ENST00000489451 TRBV7-1A0A0A6YYK4 115 aa8.72□□□□□ -1.01
ACTN4-206ENST00000489451 H3BMQ9 156 aa8.72□□□□□ -1.01
ACTN4-206ENST00000489451 RAB3DO95716 219 aa8.72□□□□□ -1.01
ACTN4-206ENST00000489451 RPA2P15927 270 aa8.72□□□□□ -1.01
ACTN4-206ENST00000489451 WT1-ASQ06250 92 aa8.72□□□□□ -1.01
ACTN4-206ENST00000489451 MEF2DQ14814 521 aa8.72□□□□□ -1.01
ACTN4-206ENST00000489451 ODF3L2Q3SX64 289 aa8.72□□□□□ -1.01
ACTN4-206ENST00000489451 ZNF585BQ52M93 769 aa8.72□□□□□ -1.01
ACTN4-206ENST00000489451 WFDC3Q8IUB2 231 aa8.72□□□□□ -1.01
ACTN4-206ENST00000489451 CADM3Q8N126 398 aa8.72□□□□□ -1.01
ACTN4-206ENST00000489451 TERB2Q8NHR7 220 aa8.72□□□□□ -1.01
ACTN4-206ENST00000489451 ZFAND1Q8TCF1 268 aa8.72□□□□□ -1.01
ACTN4-206ENST00000489451 TMEM190Q8WZ59 177 aa8.72□□□□□ -1.01
ACTN4-206ENST00000489451 CXorf58Q96LI9 332 aa8.72□□□□□ -1.01
ACTN4-206ENST00000489451 MIXL1Q9H2W2 232 aa8.72□□□□□ -1.01
ACTN4-206ENST00000489451 RSL24D1Q9UHA3 163 aaKnown RBP8.72□□□□□ -1.01
ACTN4-206ENST00000489451 UBQLN2Q9UHD9 624 aa8.72□□□□□ -1.01
ACTN4-206ENST00000489451 PRNDQ9UKY0 176 aa8.72□□□□□ -1.01
ACTN4-206ENST00000489451 TRAV25A0A0B4J276 109 aa8.71□□□□□ -1.02
ACTN4-206ENST00000489451 A0A0J9YWU9 116 aa8.71□□□□□ -1.02
ACTN4-206ENST00000489451 TGOLN2O43493 480 aa8.71□□□□□ -1.02
ACTN4-206ENST00000489451 ATG12O94817 140 aa8.71□□□□□ -1.02
ACTN4-206ENST00000489451 TRAPPC2P0DI81 140 aa8.71□□□□□ -1.02
ACTN4-206ENST00000489451 TRAPPC2BP0DI82 140 aa8.71□□□□□ -1.02
ACTN4-206ENST00000489451 PTBP1P26599 531 aaKnown RBP eCLIP8.71□□□□□ -1.022e-6■■■□□ 17.1
ACTN4-206ENST00000489451 G6PCP35575 357 aa8.71□□□□□ -1.02
ACTN4-206ENST00000489451 SCGB2B2Q4G0G5 96 aa8.71□□□□□ -1.02
ACTN4-206ENST00000489451 STEAP1BQ6NZ63 245 aa8.71□□□□□ -1.02
ACTN4-206ENST00000489451 CCDC71LQ8N9Z2 235 aa8.71□□□□□ -1.02
ACTN4-206ENST00000489451 OR1L8Q8NGR8 309 aa8.71□□□□□ -1.02
ACTN4-206ENST00000489451 MCFD2Q8NI22 146 aa8.71□□□□□ -1.02
ACTN4-206ENST00000489451 SMIM4Q8WVI0 70 aa8.71□□□□□ -1.02
ACTN4-206ENST00000489451 MARC2Q969Z3 335 aa8.71□□□□□ -1.02
ACTN4-206ENST00000489451 MRPL27Q9P0M9 148 aaKnown RBP8.71□□□□□ -1.02
ACTN4-206ENST00000489451 HECTD4Q9Y4D8 3996 aa8.71□□□□□ -1.02
ACTN4-206ENST00000489451 FABP12A6NFH5 140 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 DISC1C4P0D8 188 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 CTDSPLO15194 276 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 CD74P04233 296 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 ADMP35318 185 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 ELLP55199 621 aaPredicted RBP8.7□□□□□ -1.02
ACTN4-206ENST00000489451 PIGPP57054 158 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 RND3P61587 244 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 PMS2P11Q13670 270 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 PLET1Q6UQ28 207 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 H2BFWTQ7Z2G1 175 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 GDPD1Q8N9F7 314 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 OR1L6Q8NGR2 347 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 OR5B3Q8NH48 314 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 OR4A16Q8NH70 328 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 TMEM56Q96MV1 263 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 CHRDL1Q9BU40 450 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 HINT2Q9BX68 163 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 SLIRPQ9GZT3 109 aaKnown RBP8.7□□□□□ -1.02
ACTN4-206ENST00000489451 C5orf66Q9H5L9 145 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 COPZ2Q9P299 210 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 OR51B2Q9Y5P1 312 aa8.7□□□□□ -1.02
ACTN4-206ENST00000489451 IGHV3OR16-8A0A075B7F1 116 aa8.69□□□□□ -1.02
ACTN4-206ENST00000489451 IGHV3-21A0A0B4J1V1 117 aa8.69□□□□□ -1.02
ACTN4-206ENST00000489451 TEX50A0A1B0GTY4 177 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms