RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 IGHV3-35A0A0C4DH35 117 aa18.85■□□□□ 0.61
HMGN1-217ENST00000489072 IGKV1-5P01602 117 aa18.85■□□□□ 0.61
HMGN1-217ENST00000489072 OR4A16Q8NH70 328 aa18.85■□□□□ 0.61
HMGN1-217ENST00000489072 MARCH1Q8TCQ1 289 aa18.85■□□□□ 0.61
HMGN1-217ENST00000489072 ISOC1Q96CN7 298 aa18.85■□□□□ 0.61
HMGN1-217ENST00000489072 SLIRPQ9GZT3 109 aaKnown RBP18.85■□□□□ 0.61
HMGN1-217ENST00000489072 TECRQ9NZ01 308 aaKnown RBP18.85■□□□□ 0.61
HMGN1-217ENST00000489072 K7EIM0 57 aa18.84■□□□□ 0.61
HMGN1-217ENST00000489072 TGOLN2O43493 480 aa18.84■□□□□ 0.61
HMGN1-217ENST00000489072 P0C879 139 aa18.84■□□□□ 0.61
HMGN1-217ENST00000489072 IL18Q14116 193 aa18.84■□□□□ 0.61
HMGN1-217ENST00000489072 TM4SF20Q53R12 229 aa18.84■□□□□ 0.61
HMGN1-217ENST00000489072 PLET1Q6UQ28 207 aa18.84■□□□□ 0.61
HMGN1-217ENST00000489072 ZFAND1Q8TCF1 268 aa18.84■□□□□ 0.61
HMGN1-217ENST00000489072 TM2D3Q9BRN9 247 aa18.84■□□□□ 0.61
HMGN1-217ENST00000489072 C6orf62Q9GZU0 229 aaPredicted RBP18.84■□□□□ 0.61
HMGN1-217ENST00000489072 C3orf85A0A1B0GTC6 90 aa18.83■□□□□ 0.6
HMGN1-217ENST00000489072 OR2T8A6NH00 312 aa18.83■□□□□ 0.6
HMGN1-217ENST00000489072 F8W735 103 aaPredicted RBP18.83■□□□□ 0.6
HMGN1-217ENST00000489072 CTDSPLO15194 276 aa18.83■□□□□ 0.6
HMGN1-217ENST00000489072 PRCDQ00LT1 54 aa18.83■□□□□ 0.6
HMGN1-217ENST00000489072 SP6Q3SY56 376 aa18.83■□□□□ 0.6
HMGN1-217ENST00000489072 OR2C3Q8N628 320 aa18.83■□□□□ 0.6
HMGN1-217ENST00000489072 SCARB1Q8WTV0 552 aa18.83■□□□□ 0.6
HMGN1-217ENST00000489072 WDR89Q96FK6 387 aaPredicted RBP18.83■□□□□ 0.6
HMGN1-217ENST00000489072 ZNF436Q9C0F3 470 aaPredicted RBP18.83■□□□□ 0.6
HMGN1-217ENST00000489072 COPZ2Q9P299 210 aa18.83■□□□□ 0.6
HMGN1-217ENST00000489072 MLXQ9UH92 298 aa18.83■□□□□ 0.6
HMGN1-217ENST00000489072 CD81P60033 236 aa18.82■□□□□ 0.6
HMGN1-217ENST00000489072 HSPE1P61604 102 aaKnown RBP18.82■□□□□ 0.6
HMGN1-217ENST00000489072 UXS1Q8NBZ7 420 aa18.82■□□□□ 0.6
HMGN1-217ENST00000489072 OR1P1Q8NH06 330 aa18.82■□□□□ 0.6
HMGN1-217ENST00000489072 C21orf62Q9NYP8 219 aa18.82■□□□□ 0.6
HMGN1-217ENST00000489072 NOL3O60936 208 aaKnown RBP18.81■□□□□ 0.6
HMGN1-217ENST00000489072 CTSDP07339 412 aaPredicted RBP18.81■□□□□ 0.6
HMGN1-217ENST00000489072 CD7P09564 240 aa18.81■□□□□ 0.6
HMGN1-217ENST00000489072 MEF2DQ14814 521 aa18.81■□□□□ 0.6
HMGN1-217ENST00000489072 GUCA2BQ16661 112 aa18.81■□□□□ 0.6
HMGN1-217ENST00000489072 TMEM61Q8N0U2 210 aa18.81■□□□□ 0.6
HMGN1-217ENST00000489072 CCDC71LQ8N9Z2 235 aa18.81■□□□□ 0.6
HMGN1-217ENST00000489072 OR4C16Q8NGL9 310 aa18.81■□□□□ 0.6
HMGN1-217ENST00000489072 OR1L6Q8NGR2 347 aa18.81■□□□□ 0.6
HMGN1-217ENST00000489072 NEURL2Q9BR09 285 aa18.81■□□□□ 0.6
HMGN1-217ENST00000489072 CHRDL1Q9BU40 450 aa18.81■□□□□ 0.6
HMGN1-217ENST00000489072 ZMAT4Q9H898 229 aa18.81■□□□□ 0.6
HMGN1-217ENST00000489072 PLEKHA3Q9HB20 300 aa18.81■□□□□ 0.6
HMGN1-217ENST00000489072 A0A0B4J293 547 aa18.8■□□□□ 0.6
HMGN1-217ENST00000489072 C8orf88P0DMB2 117 aa18.8■□□□□ 0.6
HMGN1-217ENST00000489072 SPINK9Q5DT21 86 aa18.8■□□□□ 0.6
HMGN1-217ENST00000489072 ZNF57Q68EA5 555 aaPredicted RBP18.8■□□□□ 0.6
HMGN1-217ENST00000489072 BSCL2Q96G97 398 aaPredicted RBP18.8■□□□□ 0.6
HMGN1-217ENST00000489072 RTBDNQ9BSG5 229 aaPredicted RBP18.8■□□□□ 0.6
HMGN1-217ENST00000489072 TUBA4BQ9H853 241 aa18.8■□□□□ 0.6
HMGN1-217ENST00000489072 PALMDQ9NP74 551 aa18.8■□□□□ 0.6
HMGN1-217ENST00000489072 RABL2AQ9UBK7 228 aaPredicted RBP18.8■□□□□ 0.6
HMGN1-217ENST00000489072 RABL2BQ9UNT1 228 aa18.8■□□□□ 0.6
HMGN1-217ENST00000489072 CEPT1Q9Y6K0 416 aa18.8■□□□□ 0.6
HMGN1-217ENST00000489072 AKAIN1P0CW23 69 aa18.79■□□□□ 0.6
HMGN1-217ENST00000489072 UCP1P25874 307 aa18.79■□□□□ 0.6
HMGN1-217ENST00000489072 ADMP35318 185 aa18.79■□□□□ 0.6
HMGN1-217ENST00000489072 AKR1C2P52895 323 aa18.79■□□□□ 0.6
HMGN1-217ENST00000489072 HAGHQ16775 308 aa18.79■□□□□ 0.6
HMGN1-217ENST00000489072 TRIM16LQ309B1 348 aa18.79■□□□□ 0.6
HMGN1-217ENST00000489072 BTNL8Q6UX41 500 aa18.79■□□□□ 0.6
HMGN1-217ENST00000489072 ZNF114Q8NC26 417 aa18.79■□□□□ 0.6
HMGN1-217ENST00000489072 TMEM190Q8WZ59 177 aa18.79■□□□□ 0.6
HMGN1-217ENST00000489072 ATP6V0BQ99437 205 aa18.79■□□□□ 0.6
HMGN1-217ENST00000489072 SOSTQ9BQB4 213 aa18.79■□□□□ 0.6
HMGN1-217ENST00000489072 NXF2Q9GZY0 626 aaKnown RBP18.79■□□□□ 0.6
HMGN1-217ENST00000489072 WFDC10AQ9H1F0 79 aa18.79■□□□□ 0.6
HMGN1-217ENST00000489072 SLC2A8Q9NY64 477 aa18.79■□□□□ 0.6
HMGN1-217ENST00000489072 A0A0G2JRQ6 117 aa18.78■□□□□ 0.6
HMGN1-217ENST00000489072 DISC1C4P0D8 188 aa18.78■□□□□ 0.6
HMGN1-217ENST00000489072 GSTZ1O43708 216 aaPredicted RBP18.78■□□□□ 0.6
HMGN1-217ENST00000489072 TNFSF8P32971 234 aa18.78■□□□□ 0.6
HMGN1-217ENST00000489072 ELLP55199 621 aaPredicted RBP18.78■□□□□ 0.6
HMGN1-217ENST00000489072 SPSB3Q6PJ21 355 aa18.78■□□□□ 0.6
HMGN1-217ENST00000489072 UBAC2Q8NBM4 344 aa18.78■□□□□ 0.6
HMGN1-217ENST00000489072 MISP3Q96FF7 219 aa18.78■□□□□ 0.6
HMGN1-217ENST00000489072 ZNF414Q96IQ9 312 aa18.78■□□□□ 0.6
HMGN1-217ENST00000489072 UFC1Q9Y3C8 167 aa18.78■□□□□ 0.6
HMGN1-217ENST00000489072 I3L2K1 104 aa18.77■□□□□ 0.6
HMGN1-217ENST00000489072 Q56UQ5 140 aa18.77■□□□□ 0.6
HMGN1-217ENST00000489072 DEFB125Q8N687 156 aa18.77■□□□□ 0.6
HMGN1-217ENST00000489072 MCFD2Q8NI22 146 aa18.77■□□□□ 0.6
HMGN1-217ENST00000489072 MARC2Q969Z3 335 aa18.77■□□□□ 0.6
HMGN1-217ENST00000489072 C5orf66Q9H5L9 145 aa18.77■□□□□ 0.6
HMGN1-217ENST00000489072 ANKRD20A5PA0PJZ0 165 aa18.76■□□□□ 0.59
HMGN1-217ENST00000489072 ST8SIA3O43173 380 aa18.76■□□□□ 0.59
HMGN1-217ENST00000489072 SURF2Q15527 256 aaPredicted RBP18.76■□□□□ 0.59
HMGN1-217ENST00000489072 LINC00322Q6ZN03 302 aaPredicted RBP18.76■□□□□ 0.59
HMGN1-217ENST00000489072 TMEM222Q9H0R3 208 aa18.76■□□□□ 0.59
HMGN1-217ENST00000489072 MRPL27Q9P0M9 148 aaKnown RBP18.76■□□□□ 0.59
HMGN1-217ENST00000489072 RSL24D1Q9UHA3 163 aaKnown RBP18.76■□□□□ 0.59
HMGN1-217ENST00000489072 GPR132Q9UNW8 380 aa18.76■□□□□ 0.59
HMGN1-217ENST00000489072 C14orf166Q9Y224 244 aaKnown RBP18.76■□□□□ 0.59
HMGN1-217ENST00000489072 NDUFA4O00483 81 aa18.75■□□□□ 0.59
HMGN1-217ENST00000489072 ATG12O94817 140 aa18.75■□□□□ 0.59
HMGN1-217ENST00000489072 SCAF4O95104 1147 aaKnown RBP18.75■□□□□ 0.59
HMGN1-217ENST00000489072 CTSGP08311 255 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms