RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 SLC25A46Q96AG3 418 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 PPCDCQ96CD2 204 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 SEH1LQ96EE3 360 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 SIGMAR1Q99720 223 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 HIST1H2BLQ99880 126 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 ADAT1Q9BUB4 502 aaKnown RBP2.17□□□□□ -2.06
SSR1-209ENST00000488834 MS4A8Q9BY19 250 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 PECRQ9BY49 303 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 SLC25A31Q9H0C2 315 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 GABARAPL1Q9H0R8 117 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 EDA2RQ9HAV5 297 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 HEBP1Q9NRV9 189 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 SPANXA1Q9NS26 97 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 LYRM2Q9NU23 88 aaPredicted RBP2.17□□□□□ -2.06
SSR1-209ENST00000488834 TMEM38BQ9NVV0 291 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 OR5AC2Q9NZP5 309 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 CACFD1Q9UGQ2 172 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 NAT8Q9UHE5 227 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 JPT1Q9UK76 154 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 MRC1P22897 1456 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 PTPRMP28827 1452 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 NRKQ7Z2Y5 1582 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 C5P01031 1676 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 UBR1Q8IWV7 1749 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 SHROOM3Q8TF72 1996 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 ZNF106Q9H2Y7 1883 aaKnown RBP2.16□□□□□ -2.06
SSR1-209ENST00000488834 KIDINS220Q9ULH0 1771 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 RREB1Q92766 1687 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 A2ML1A8K2U0 1454 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 CD163L1Q9NR16 1453 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 CENPVL3A0A0U1RRI6 287 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 TMEM223A0PJW6 202 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 FAM183AA6NL82 134 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 SNRPGP15A8MWD9 76 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 HIST1H2BKO60814 126 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 MT-ND4P03905 459 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 HIST1H2BJP06899 126 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 CD14P08571 375 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 FABP4P15090 132 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 HIST1H2BOP23527 126 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 ADORA1P30542 326 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 OR10J1P30954 320 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 CD70P32970 193 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 HIST1H2BBP33778 126 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 MARCKSL1P49006 195 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 INPP1P49441 399 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 P2RX1P51575 399 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 HIST1H2BDP58876 126 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 TAS2R46P59540 309 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 HIST1H2BCP62807 126 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 FMODQ06828 376 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 SYCNQ0VAF6 134 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 LAMTOR4Q0VGL1 99 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 OR2F1Q13607 317 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 HTR4Q13639 388 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 NUMA1Q14980 2115 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 EBPQ15125 230 aaKnown RBP2.16□□□□□ -2.06
SSR1-209ENST00000488834 RHEBQ15382 184 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 HIST2H2BEQ16778 126 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 CLEC12AQ5QGZ9 265 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.16□□□□□ -2.06
SSR1-209ENST00000488834 LDLRAD2Q5SZI1 272 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 BCL2L15Q5TBC7 163 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 TMEM42Q69YG0 159 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 CEMP1Q6PRD7 247 aaPredicted RBP2.16□□□□□ -2.06
SSR1-209ENST00000488834 ZNF705AQ6ZN79 300 aaPredicted RBP2.16□□□□□ -2.06
SSR1-209ENST00000488834 ZCCHC23Q6ZST2 131 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 TMPPEQ6ZT21 453 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 GLT6D1Q7Z4J2 308 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 KCNRGQ8N5I3 272 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 SLC35G3Q8N808 338 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 C15orf56Q8N910 161 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 C11orf72Q8NBR9 251 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 SLC30A7Q8NEW0 376 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 OR2Z1Q8NG97 314 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 OR1J4Q8NGS1 313 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 OR10X1Q8NGY0 326 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 ZNF675Q8TD23 568 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 HIST1H2BHQ93079 126 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 GPR146Q96CH1 333 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 IMP4Q96G21 291 aaKnown RBP2.16□□□□□ -2.06
SSR1-209ENST00000488834 PYURFQ96I23 114 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 CAMK2N2Q96S95 79 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 TIMM17AQ99595 171 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 PITX2Q99697 317 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 HIST1H2BNQ99877 126 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 HIST1H2BMQ99879 126 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 PBDC1Q9BVG4 233 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 FBXL15Q9H469 300 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 VSIRQ9H7M9 311 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 CBLN4Q9NTU7 201 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 DMAC2Q9NW81 257 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 TOGARAM1Q9Y4F4 1720 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 SLIT1O75093 1534 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 PTPRJQ12913 1337 aa2.16□□□□□ -2.06
SSR1-209ENST00000488834 RGPD3A6NKT7 1758 aaPredicted RBP2.15□□□□□ -2.06
SSR1-209ENST00000488834 STRCQ7RTU9 1775 aa2.15□□□□□ -2.06
SSR1-209ENST00000488834 RGPD4Q7Z3J3 1758 aa2.15□□□□□ -2.06
SSR1-209ENST00000488834 XIRP1Q702N8 1843 aaKnown RBP2.15□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms