RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 FBXO7Q9Y3I1 522 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 TIMM9Q9Y5J7 89 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 DNAJC9-AS1A6NH13 148 aa15.5■□□□□ 0.07
CCM2-216ENST00000488727 OOSP1A8MZH6 123 aa15.5■□□□□ 0.07
CCM2-216ENST00000488727 SCAF4O95104 1147 aaKnown RBP15.5■□□□□ 0.07
CCM2-216ENST00000488727 LY86O95711 162 aa15.5■□□□□ 0.07
CCM2-216ENST00000488727 HPRT1P00492 218 aa15.5■□□□□ 0.07
CCM2-216ENST00000488727 KIR2DS2P43631 304 aa15.5■□□□□ 0.07
CCM2-216ENST00000488727 CCL20P78556 96 aa15.5■□□□□ 0.07
CCM2-216ENST00000488727 ZNF833PQ6ZTB9 187 aa15.5■□□□□ 0.07
CCM2-216ENST00000488727 PRIMA1Q86XR5 153 aa15.5■□□□□ 0.07
CCM2-216ENST00000488727 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.5■□□□□ 0.07
CCM2-216ENST00000488727 OR4C12Q96R67 309 aa15.5■□□□□ 0.07
CCM2-216ENST00000488727 MARCH11A6NNE9 402 aa15.49■□□□□ 0.07
CCM2-216ENST00000488727 VENTXO95231 258 aa15.49■□□□□ 0.07
CCM2-216ENST00000488727 SRSF2Q01130 221 aaKnown RBP15.49■□□□□ 0.07
CCM2-216ENST00000488727 ZNF506Q5JVG8 444 aa15.49■□□□□ 0.07
CCM2-216ENST00000488727 DTD1Q8TEA8 209 aa15.49■□□□□ 0.07
CCM2-216ENST00000488727 R3HDM4Q96D70 268 aa15.49■□□□□ 0.07
CCM2-216ENST00000488727 IGHV1-3A0A0C4DH29 117 aa15.48■□□□□ 0.07
CCM2-216ENST00000488727 PMS2P5A8MQ11 134 aa15.48■□□□□ 0.07
CCM2-216ENST00000488727 H3BUX3 64 aa15.48■□□□□ 0.07
CCM2-216ENST00000488727 TIMM23O14925 209 aa15.48■□□□□ 0.07
CCM2-216ENST00000488727 TCF21O43680 179 aa15.48■□□□□ 0.07
CCM2-216ENST00000488727 CCDC144NLQ6NUI1 221 aa15.48■□□□□ 0.07
CCM2-216ENST00000488727 CENPVQ7Z7K6 275 aaPredicted RBP15.48■□□□□ 0.07
CCM2-216ENST00000488727 TGIF2LXQ8IUE1 241 aa15.48■□□□□ 0.07
CCM2-216ENST00000488727 SSMEM1Q8WWF3 244 aa15.48■□□□□ 0.07
CCM2-216ENST00000488727 CFHR4Q92496 578 aa15.48■□□□□ 0.07
CCM2-216ENST00000488727 RSG1Q9BU20 258 aa15.48■□□□□ 0.07
CCM2-216ENST00000488727 TNFRSF19Q9NS68 423 aa15.48■□□□□ 0.07
CCM2-216ENST00000488727 CD24P25063 80 aa15.48■□□□□ 0.07
CCM2-216ENST00000488727 FBLN7Q53RD9 439 aa15.48■□□□□ 0.07
CCM2-216ENST00000488727 MBD3L1Q8WWY6 194 aa15.48■□□□□ 0.07
CCM2-216ENST00000488727 TAF15Q92804 592 aaKnown RBP eCLIP15.48■□□□□ 0.07
CCM2-216ENST00000488727 PINX1Q96BK5 328 aaKnown RBP15.48■□□□□ 0.07
CCM2-216ENST00000488727 SMCO4Q9NRQ5 59 aa15.48■□□□□ 0.07
CCM2-216ENST00000488727 A0A1B0GV50 99 aa15.47■□□□□ 0.07
CCM2-216ENST00000488727 M0R1X1 148 aa15.47■□□□□ 0.07
CCM2-216ENST00000488727 HABP2Q14520 560 aaPredicted RBP15.47■□□□□ 0.07
CCM2-216ENST00000488727 FAM122CQ6P4D5 195 aa15.47■□□□□ 0.07
CCM2-216ENST00000488727 DDB2Q92466 427 aa15.47■□□□□ 0.07
CCM2-216ENST00000488727 TMEM147Q9BVK8 224 aa15.47■□□□□ 0.07
CCM2-216ENST00000488727 MRPL20Q9BYC9 149 aaKnown RBP15.47■□□□□ 0.07
CCM2-216ENST00000488727 PRELID3BQ9Y3B1 194 aa15.47■□□□□ 0.07
CCM2-216ENST00000488727 FCGR3BO75015 233 aa15.46■□□□□ 0.07
CCM2-216ENST00000488727 HSPB1P04792 205 aaKnown RBP15.46■□□□□ 0.07
CCM2-216ENST00000488727 FLI1Q01543 452 aaPredicted RBP15.46■□□□□ 0.07
CCM2-216ENST00000488727 VWC2Q2TAL6 325 aa15.46■□□□□ 0.07
CCM2-216ENST00000488727 PDLIM3Q53GG5 364 aaPredicted RBP15.46■□□□□ 0.07
CCM2-216ENST00000488727 OR52E5Q8NH55 327 aa15.46■□□□□ 0.07
CCM2-216ENST00000488727 SFT2D1Q8WV19 159 aa15.46■□□□□ 0.07
CCM2-216ENST00000488727 S1PR3Q99500 378 aa15.46■□□□□ 0.07
CCM2-216ENST00000488727 RARRES2Q99969 163 aa15.46■□□□□ 0.07
CCM2-216ENST00000488727 RPRMQ9NS64 109 aa15.46■□□□□ 0.07
CCM2-216ENST00000488727 IGHV3-72A0A0B4J1Y9 119 aa15.46■□□□□ 0.06
CCM2-216ENST00000488727 H7C2Y5 167 aa15.46■□□□□ 0.06
CCM2-216ENST00000488727 SRP19P09132 144 aaKnown RBP15.46■□□□□ 0.06
CCM2-216ENST00000488727 OR9G9P0C7N8 305 aa15.46■□□□□ 0.06
CCM2-216ENST00000488727 LINC00205P59089 165 aa15.46■□□□□ 0.06
CCM2-216ENST00000488727 ICAM4Q14773 271 aa15.46■□□□□ 0.06
CCM2-216ENST00000488727 RHEBQ15382 184 aa15.46■□□□□ 0.06
CCM2-216ENST00000488727 AWAT1Q58HT5 328 aa15.46■□□□□ 0.06
CCM2-216ENST00000488727 TMEM41BQ5BJD5 291 aa15.46■□□□□ 0.06
CCM2-216ENST00000488727 FAM71F2Q6NXP2 309 aa15.46■□□□□ 0.06
CCM2-216ENST00000488727 MOB3BQ86TA1 216 aa15.46■□□□□ 0.06
CCM2-216ENST00000488727 TMEM86BQ8N661 226 aa15.46■□□□□ 0.06
CCM2-216ENST00000488727 NABP2Q9BQ15 211 aa15.46■□□□□ 0.06
CCM2-216ENST00000488727 UBE2L5PA0A1B0GUS4 154 aa15.45■□□□□ 0.06
CCM2-216ENST00000488727 CLDN34H7C241 214 aa15.45■□□□□ 0.06
CCM2-216ENST00000488727 CT45A6P0DMU7 189 aa15.45■□□□□ 0.06
CCM2-216ENST00000488727 CT45A5P0DMU8 189 aa15.45■□□□□ 0.06
CCM2-216ENST00000488727 CT45A7P0DMV0 189 aa15.45■□□□□ 0.06
CCM2-216ENST00000488727 BRS3P32247 399 aa15.45■□□□□ 0.06
CCM2-216ENST00000488727 LY6EQ16553 131 aa15.45■□□□□ 0.06
CCM2-216ENST00000488727 KHDC3LQ587J8 217 aa15.45■□□□□ 0.06
CCM2-216ENST00000488727 OR8G2PQ6IF36 304 aa15.45■□□□□ 0.06
CCM2-216ENST00000488727 OR10G4Q8NGN3 311 aa15.45■□□□□ 0.06
CCM2-216ENST00000488727 OR5R1Q8NH85 324 aa15.45■□□□□ 0.06
CCM2-216ENST00000488727 JMJD8Q96S16 334 aa15.45■□□□□ 0.06
CCM2-216ENST00000488727 TUBA4BQ9H853 241 aa15.45■□□□□ 0.06
CCM2-216ENST00000488727 VPREB3Q9UKI3 123 aa15.45■□□□□ 0.06
CCM2-216ENST00000488727 CEBPZOSA8MTT3 80 aa15.44■□□□□ 0.06
CCM2-216ENST00000488727 SMUG1Q53HV7 270 aa15.44■□□□□ 0.06
CCM2-216ENST00000488727 SOHLH1Q5JUK2 328 aa15.44■□□□□ 0.06
CCM2-216ENST00000488727 C15orf54Q8N8G6 183 aa15.44■□□□□ 0.06
CCM2-216ENST00000488727 OR10P1Q8NGE3 313 aa15.44■□□□□ 0.06
CCM2-216ENST00000488727 ADTRPQ96IZ2 230 aa15.44■□□□□ 0.06
CCM2-216ENST00000488727 QTRT1Q9BXR0 403 aaKnown RBP15.44■□□□□ 0.06
CCM2-216ENST00000488727 TCF19Q9Y242 345 aa15.44■□□□□ 0.06
CCM2-216ENST00000488727 C2CD3Q4AC94 2353 aa15.44■□□□□ 0.06
CCM2-216ENST00000488727 LOC102723971A0A1B0GUV8 181 aa15.43■□□□□ 0.06
CCM2-216ENST00000488727 C7orf77A4D0Y5 90 aa15.43■□□□□ 0.06
CCM2-216ENST00000488727 SNRNP70P08621 437 aaKnown RBP15.43■□□□□ 0.06
CCM2-216ENST00000488727 NQO2P16083 231 aa15.43■□□□□ 0.06
CCM2-216ENST00000488727 THBS3P49746 956 aa15.43■□□□□ 0.06
CCM2-216ENST00000488727 ERVK-16P61578 105 aa15.43■□□□□ 0.06
CCM2-216ENST00000488727 ZNF726P1Q15940 193 aa15.43■□□□□ 0.06
CCM2-216ENST00000488727 OR4S2Q8NH73 311 aa15.43■□□□□ 0.06
CCM2-216ENST00000488727 VSIRQ9H7M9 311 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms