RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 TERB2Q8NHR7 220 aa13.41□□□□□ -0.26
ITGB1-215ENST00000488494 DIRAS2Q96HU8 199 aa13.41□□□□□ -0.26
ITGB1-215ENST00000488494 NBEAL2Q6ZNJ1 2754 aa13.4□□□□□ -0.26
ITGB1-215ENST00000488494 A8MZ25 164 aa13.4□□□□□ -0.26
ITGB1-215ENST00000488494 TGOLN2O43493 480 aa13.4□□□□□ -0.26
ITGB1-215ENST00000488494 IGKV1-5P01602 117 aa13.4□□□□□ -0.26
ITGB1-215ENST00000488494 CBLN1P23435 193 aa13.4□□□□□ -0.26
ITGB1-215ENST00000488494 AKR1C2P52895 323 aa13.4□□□□□ -0.26
ITGB1-215ENST00000488494 MEF2DQ14814 521 aa13.4□□□□□ -0.26
ITGB1-215ENST00000488494 GUCA2BQ16661 112 aa13.4□□□□□ -0.26
ITGB1-215ENST00000488494 IZUMO4Q1ZYL8 232 aa13.4□□□□□ -0.26
ITGB1-215ENST00000488494 PLET1Q6UQ28 207 aa13.4□□□□□ -0.26
ITGB1-215ENST00000488494 CCDC71LQ8N9Z2 235 aa13.4□□□□□ -0.26
ITGB1-215ENST00000488494 MARCH1Q8TCQ1 289 aa13.4□□□□□ -0.26
ITGB1-215ENST00000488494 WDR89Q96FK6 387 aaPredicted RBP13.4□□□□□ -0.26
ITGB1-215ENST00000488494 TECRQ9NZ01 308 aaKnown RBP13.4□□□□□ -0.26
ITGB1-215ENST00000488494 COPZ2Q9P299 210 aa13.4□□□□□ -0.26
ITGB1-215ENST00000488494 C3orf85A0A1B0GTC6 90 aa13.39□□□□□ -0.27
ITGB1-215ENST00000488494 K7EIM0 57 aa13.39□□□□□ -0.27
ITGB1-215ENST00000488494 PRCDQ00LT1 54 aa13.39□□□□□ -0.27
ITGB1-215ENST00000488494 TRIM16LQ309B1 348 aa13.39□□□□□ -0.27
ITGB1-215ENST00000488494 TM4SF20Q53R12 229 aa13.39□□□□□ -0.27
ITGB1-215ENST00000488494 ZFAND1Q8TCF1 268 aa13.39□□□□□ -0.27
ITGB1-215ENST00000488494 BSCL2Q96G97 398 aaPredicted RBP13.39□□□□□ -0.27
ITGB1-215ENST00000488494 SLIRPQ9GZT3 109 aaKnown RBP13.39□□□□□ -0.27
ITGB1-215ENST00000488494 ZMAT4Q9H898 229 aa13.39□□□□□ -0.27
ITGB1-215ENST00000488494 PLEKHA3Q9HB20 300 aa13.39□□□□□ -0.27
ITGB1-215ENST00000488494 C21orf62Q9NYP8 219 aa13.39□□□□□ -0.27
ITGB1-215ENST00000488494 MLXQ9UH92 298 aa13.39□□□□□ -0.27
ITGB1-215ENST00000488494 CTDSPLO15194 276 aa13.38□□□□□ -0.27
ITGB1-215ENST00000488494 CTSDP07339 412 aaPredicted RBP13.38□□□□□ -0.27
ITGB1-215ENST00000488494 P0C879 139 aa13.38□□□□□ -0.27
ITGB1-215ENST00000488494 SP6Q3SY56 376 aa13.38□□□□□ -0.27
ITGB1-215ENST00000488494 SPINK9Q5DT21 86 aa13.38□□□□□ -0.27
ITGB1-215ENST00000488494 BTNL8Q6UX41 500 aa13.38□□□□□ -0.27
ITGB1-215ENST00000488494 TMEM61Q8N0U2 210 aa13.38□□□□□ -0.27
ITGB1-215ENST00000488494 OR2C3Q8N628 320 aa13.38□□□□□ -0.27
ITGB1-215ENST00000488494 UBAC2Q8NBM4 344 aa13.38□□□□□ -0.27
ITGB1-215ENST00000488494 OR4C16Q8NGL9 310 aa13.38□□□□□ -0.27
ITGB1-215ENST00000488494 OR1L6Q8NGR2 347 aa13.38□□□□□ -0.27
ITGB1-215ENST00000488494 OR1P1Q8NH06 330 aa13.38□□□□□ -0.27
ITGB1-215ENST00000488494 SCARB1Q8WTV0 552 aa13.38□□□□□ -0.27
ITGB1-215ENST00000488494 TMEM190Q8WZ59 177 aa13.38□□□□□ -0.27
ITGB1-215ENST00000488494 MISP3Q96FF7 219 aa13.38□□□□□ -0.27
ITGB1-215ENST00000488494 NEURL2Q9BR09 285 aa13.38□□□□□ -0.27
ITGB1-215ENST00000488494 TM2D3Q9BRN9 247 aa13.38□□□□□ -0.27
ITGB1-215ENST00000488494 TUBA4BQ9H853 241 aa13.38□□□□□ -0.27
ITGB1-215ENST00000488494 PALMDQ9NP74 551 aa13.38□□□□□ -0.27
ITGB1-215ENST00000488494 ZNF785A8K8V0 405 aa13.37□□□□□ -0.27
ITGB1-215ENST00000488494 DISC1C4P0D8 188 aa13.37□□□□□ -0.27
ITGB1-215ENST00000488494 F8W735 103 aaPredicted RBP13.37□□□□□ -0.27
ITGB1-215ENST00000488494 CD7P09564 240 aa13.37□□□□□ -0.27
ITGB1-215ENST00000488494 AKAIN1P0CW23 69 aa13.37□□□□□ -0.27
ITGB1-215ENST00000488494 Q56UQ5 140 aa13.37□□□□□ -0.27
ITGB1-215ENST00000488494 ZNF57Q68EA5 555 aaPredicted RBP13.37□□□□□ -0.27
ITGB1-215ENST00000488494 UXS1Q8NBZ7 420 aa13.37□□□□□ -0.27
ITGB1-215ENST00000488494 ZNF436Q9C0F3 470 aaPredicted RBP13.37□□□□□ -0.27
ITGB1-215ENST00000488494 WFDC10AQ9H1F0 79 aa13.37□□□□□ -0.27
ITGB1-215ENST00000488494 SLC2A8Q9NY64 477 aa13.37□□□□□ -0.27
ITGB1-215ENST00000488494 RABL2AQ9UBK7 228 aaPredicted RBP13.37□□□□□ -0.27
ITGB1-215ENST00000488494 RABL2BQ9UNT1 228 aa13.37□□□□□ -0.27
ITGB1-215ENST00000488494 C14orf166Q9Y224 244 aaKnown RBP13.37□□□□□ -0.27
ITGB1-215ENST00000488494 UFC1Q9Y3C8 167 aa13.37□□□□□ -0.27
ITGB1-215ENST00000488494 ATG12O94817 140 aa13.36□□□□□ -0.27
ITGB1-215ENST00000488494 UCP1P25874 307 aa13.36□□□□□ -0.27
ITGB1-215ENST00000488494 HSPE1P61604 102 aaKnown RBP13.36□□□□□ -0.27
ITGB1-215ENST00000488494 SPSB3Q6PJ21 355 aa13.36□□□□□ -0.27
ITGB1-215ENST00000488494 SLC35G3Q8N808 338 aa13.36□□□□□ -0.27
ITGB1-215ENST00000488494 ZNF114Q8NC26 417 aa13.36□□□□□ -0.27
ITGB1-215ENST00000488494 MCFD2Q8NI22 146 aa13.36□□□□□ -0.27
ITGB1-215ENST00000488494 RNASE11Q8TAA1 199 aaKnown RBP13.36□□□□□ -0.27
ITGB1-215ENST00000488494 MARC2Q969Z3 335 aa13.36□□□□□ -0.27
ITGB1-215ENST00000488494 CHRDL1Q9BU40 450 aa13.36□□□□□ -0.27
ITGB1-215ENST00000488494 RSL24D1Q9UHA3 163 aaKnown RBP13.36□□□□□ -0.27
ITGB1-215ENST00000488494 A0A0B4J293 547 aa13.35□□□□□ -0.27
ITGB1-215ENST00000488494 GSTZ1O43708 216 aaPredicted RBP13.35□□□□□ -0.27
ITGB1-215ENST00000488494 SCAF4O95104 1147 aaKnown RBP13.35□□□□□ -0.27
ITGB1-215ENST00000488494 HAGHQ16775 308 aa13.35□□□□□ -0.27
ITGB1-215ENST00000488494 ATP6V0BQ99437 205 aa13.35□□□□□ -0.27
ITGB1-215ENST00000488494 RTBDNQ9BSG5 229 aaPredicted RBP13.35□□□□□ -0.27
ITGB1-215ENST00000488494 CEPT1Q9Y6K0 416 aa13.35□□□□□ -0.27
ITGB1-215ENST00000488494 IGHV3OR16-8A0A075B7F1 116 aa13.34□□□□□ -0.27
ITGB1-215ENST00000488494 A0A0G2JRQ6 117 aa13.34□□□□□ -0.27
ITGB1-215ENST00000488494 TEX13DA0A0J9YY54 714 aaPredicted RBP13.34□□□□□ -0.27
ITGB1-215ENST00000488494 ANKRD20A5PA0PJZ0 165 aa13.34□□□□□ -0.27
ITGB1-215ENST00000488494 ST8SIA3O43173 380 aa13.34□□□□□ -0.27
ITGB1-215ENST00000488494 B3GALNT1O75752 331 aa13.34□□□□□ -0.27
ITGB1-215ENST00000488494 OR5AC1P0C628 307 aa13.34□□□□□ -0.27
ITGB1-215ENST00000488494 ADMP35318 185 aa13.34□□□□□ -0.27
ITGB1-215ENST00000488494 ELLP55199 621 aaPredicted RBP13.34□□□□□ -0.27
ITGB1-215ENST00000488494 SURF2Q15527 256 aaPredicted RBP13.34□□□□□ -0.27
ITGB1-215ENST00000488494 DEFB125Q8N687 156 aa13.34□□□□□ -0.27
ITGB1-215ENST00000488494 OR51S1Q8NGJ8 323 aa13.34□□□□□ -0.27
ITGB1-215ENST00000488494 PINX1Q96BK5 328 aaKnown RBP13.34□□□□□ -0.27
ITGB1-215ENST00000488494 RRNAD1Q96FB5 475 aaKnown RBP13.34□□□□□ -0.27
ITGB1-215ENST00000488494 PRRT1Q99946 306 aa13.34□□□□□ -0.27
ITGB1-215ENST00000488494 C20orf24Q9BUV8 137 aa13.34□□□□□ -0.27
ITGB1-215ENST00000488494 TMEM222Q9H0R3 208 aa13.34□□□□□ -0.27
ITGB1-215ENST00000488494 C5orf66Q9H5L9 145 aa13.34□□□□□ -0.27
ITGB1-215ENST00000488494 NAA60Q9H7X0 242 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms