RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 SIGLEC8Q9NYZ4 499 aa3.91□□□□□ -1.78
CDC42BPA-213ENST00000488131 MTCH1Q9NZJ7 389 aa3.91□□□□□ -1.78
CDC42BPA-213ENST00000488131 YTHDF2Q9Y5A9 579 aaKnown RBP3.91□□□□□ -1.78
CDC42BPA-213ENST00000488131 SPCS1Q9Y6A9 102 aa3.91□□□□□ -1.78
CDC42BPA-213ENST00000488131 LRP4O75096 1905 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 TET1Q8NFU7 2136 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 IGKV3D-11A0A0A0MRZ8 115 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 ZNF816-ZNF321PA0A0X1KG74 233 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 H3BUT2 72 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 K7EQM0 130 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 RRHO14718 337 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 SIVA1O15304 175 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 PRKNO60260 465 aaPredicted RBP3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 TNFRSF6BO95407 300 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 DEFA4P12838 97 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 USF1P22415 310 aaPredicted RBP3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 ZFP36P26651 326 aaKnown RBP3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 CEBPDP49716 269 aaPredicted RBP3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 GNG4P50150 75 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 PPOXP50336 477 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 PLCXD2Q0VAA5 305 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 GABRA6Q16445 453 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 KRTAP27-1Q3LI81 207 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 CENPWQ5EE01 88 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 SLC25A53Q5H9E4 307 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 LINC01545Q5VT33 79 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 SHISA6Q6ZSJ9 500 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 ATP5L2Q7Z4Y8 100 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 PRR22Q8IZ63 422 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 ZNF441Q8N8Z8 693 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 OR51H1Q8NH63 302 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 OR10G6Q8NH81 332 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 NABP1Q96AH0 204 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 C5orf30Q96GV9 206 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 GRAMD2BQ96HH9 432 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 FAM110AQ9BQ89 295 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 GEMIN7Q9H840 131 aaKnown RBP3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 SPANXB1Q9NS25 103 aaPredicted RBP3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 C19orf25Q9UFG5 118 aaPredicted RBP3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 JPT1Q9UK76 154 aa3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 BOKQ9UMX3 212 aaPredicted RBP3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 TSSC4Q9Y5U2 329 aaPredicted RBP3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 NCOA6Q14686 2063 aaPredicted RBP3.9□□□□□ -1.78
CDC42BPA-213ENST00000488131 NOTCH4Q99466 2003 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 TRAV38-1A0A0B4J264 116 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 IGHV1-24A0A0C4DH33 117 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 A0A1W2PPV4 95 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 VWC2LB2RUY7 222 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 H0Y8G0 127 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 ZNF207O43670 478 aaKnown RBP3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 FABP2P12104 132 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 GCHFRP30047 84 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 OTX2P32243 289 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 TMPRSS3P57727 454 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 RPS21P63220 83 aaKnown RBP3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 SSBP2P81877 361 aaPredicted RBP3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 ARF1P84077 181 aaKnown RBP3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 FHL3Q13643 280 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 GCSAMLQ5JQS6 135 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 RNASEKQ6P5S7 137 aaKnown RBP3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 ZNF841Q6ZN19 808 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 FAM231DQ6ZW35 169 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 YAF2Q8IY57 180 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 TMEM251Q8N6I4 163 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 TPRX1Q8N7U7 411 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 NHLRC2Q8NBF2 726 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 OR9G4Q8NGQ1 327 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 OR4A16Q8NH70 328 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 ZNF418Q8TF45 676 aaPredicted RBP3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 BLNKQ8WV28 456 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 RNF138Q8WVD3 245 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 SPTSSAQ969W0 71 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 IGF2BP2-AS1Q96M15 143 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 WDR54Q9H977 334 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 ZNF331Q9NQX6 463 aaPredicted RBP3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 ERRFI1Q9UJM3 462 aaPredicted RBP3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 PPP1R3CQ9UQK1 317 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 ZNF257Q9Y2Q1 563 aa3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 TNRC6BQ9UPQ9 1833 aaKnown RBP3.9□□□□□ -1.79
CDC42BPA-213ENST00000488131 GTF3C1Q12789 2109 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 SPAARA0A1B0GVQ0 90 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 A0A1B0GX78 115 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 A0A1B0GXF2 115 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 F5H5K5 113 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 TNFRSF13BO14836 293 aaPredicted RBP3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 LEPROTL1O95214 131 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 IGLV2-8P01709 118 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 LIPFP07098 398 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 ADH4P08319 380 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 FGF12P61328 243 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 HHEXQ03014 270 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 MEF2CQ06413 473 aaPredicted RBP3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 CST6Q15828 149 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 LTC4SQ16873 150 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 TIGITQ495A1 244 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 C17orf99Q6UX52 265 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 ZNF788Q6ZQV5 615 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 LINC00596Q86U02 117 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms