RNA–Protein interactions for RNA: ENST00000487938.5

VIM-206, Transcript of vimentin, humanhuman

TSL 5

Gene VIM, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-206ENST00000487938 CRYBB3P26998 211 aa14.63□□□□□ -0.07
VIM-206ENST00000487938 CEACAM8P31997 349 aaPredicted RBP14.63□□□□□ -0.07
VIM-206ENST00000487938 REG1BP48304 166 aa14.63□□□□□ -0.07
VIM-206ENST00000487938 OR9G1Q8NH87 305 aa14.63□□□□□ -0.07
VIM-206ENST00000487938 EAF1Q96JC9 268 aaPredicted RBP14.63□□□□□ -0.07
VIM-206ENST00000487938 BTF3L4Q96K17 158 aa14.63□□□□□ -0.07
VIM-206ENST00000487938 LINC00574Q9H8X3 128 aa14.63□□□□□ -0.07
VIM-206ENST00000487938 ZNF257Q9Y2Q1 563 aa14.63□□□□□ -0.07
VIM-206ENST00000487938 OR10J4P0C629 311 aa14.62□□□□□ -0.07
VIM-206ENST00000487938 ZNF503Q96F45 646 aa14.62□□□□□ -0.07
VIM-206ENST00000487938 MRPL20Q9BYC9 149 aaKnown RBP14.62□□□□□ -0.07
VIM-206ENST00000487938 IL36BQ9NZH7 164 aa14.62□□□□□ -0.07
VIM-206ENST00000487938 ARFGEF3Q5TH69 2177 aa14.62□□□□□ -0.07
VIM-206ENST00000487938 CCKARP32238 428 aa14.62□□□□□ -0.07
VIM-206ENST00000487938 TEX36Q5VZQ5 186 aa14.62□□□□□ -0.07
VIM-206ENST00000487938 WFDC8Q8IUA0 241 aa14.62□□□□□ -0.07
VIM-206ENST00000487938 PRSS33Q8NF86 280 aa14.62□□□□□ -0.07
VIM-206ENST00000487938 SLC25A10Q9UBX3 287 aaPredicted RBP14.62□□□□□ -0.07
VIM-206ENST00000487938 CEP250Q9BV73 2442 aa14.62□□□□□ -0.07
VIM-206ENST00000487938 HELTA6NFD8 242 aa14.61□□□□□ -0.07
VIM-206ENST00000487938 A8MWP6 167 aa14.61□□□□□ -0.07
VIM-206ENST00000487938 OR7C2O60412 319 aa14.61□□□□□ -0.07
VIM-206ENST00000487938 ERVFC1-1P60608 527 aa14.61□□□□□ -0.07
VIM-206ENST00000487938 C11orf52Q96A22 123 aa14.61□□□□□ -0.07
VIM-206ENST00000487938 E7EUB6 86 aa14.61□□□□□ -0.07
VIM-206ENST00000487938 RNASE2P10153 161 aaKnown RBP14.61□□□□□ -0.07
VIM-206ENST00000487938 CHRNB4P30926 498 aa14.61□□□□□ -0.07
VIM-206ENST00000487938 YPEL3P61236 119 aaPredicted RBP14.61□□□□□ -0.07
VIM-206ENST00000487938 FAM57AQ8TBR7 257 aa14.61□□□□□ -0.07
VIM-206ENST00000487938 LINC00312Q9Y6C7 94 aa14.61□□□□□ -0.07
VIM-206ENST00000487938 ROS1P08922 2347 aa14.6□□□□□ -0.07
VIM-206ENST00000487938 A0A1B0GV90 55 aa14.6□□□□□ -0.07
VIM-206ENST00000487938 FNDC10F2Z333 226 aa14.6□□□□□ -0.07
VIM-206ENST00000487938 MKRN2OSH3BPM6 223 aa14.6□□□□□ -0.07
VIM-206ENST00000487938 FCN3O75636 299 aa14.6□□□□□ -0.07
VIM-206ENST00000487938 SCGB1D1O95968 90 aa14.6□□□□□ -0.07
VIM-206ENST00000487938 CRYABP02511 175 aaKnown RBP14.6□□□□□ -0.07
VIM-206ENST00000487938 PAX1P15863 534 aa14.6□□□□□ -0.07
VIM-206ENST00000487938 SSX2Q16385 188 aa14.6□□□□□ -0.07
VIM-206ENST00000487938 C2orf83Q53S99 150 aa14.6□□□□□ -0.07
VIM-206ENST00000487938 PQLC2Q6ZP29 291 aa14.6□□□□□ -0.07
VIM-206ENST00000487938 OR2T6Q8NHC8 308 aa14.6□□□□□ -0.07
VIM-206ENST00000487938 HARBI1Q96MB7 349 aa14.6□□□□□ -0.07
VIM-206ENST00000487938 BET1LQ9NYM9 111 aa14.6□□□□□ -0.07
VIM-206ENST00000487938 TECRQ9NZ01 308 aaKnown RBP14.6□□□□□ -0.07
VIM-206ENST00000487938 AKAP13Q12802 2813 aa14.59□□□□□ -0.07
VIM-206ENST00000487938 MAP1BP46821 2468 aaKnown RBP14.59□□□□□ -0.07
VIM-206ENST00000487938 C9JCJ5 164 aa14.59□□□□□ -0.07
VIM-206ENST00000487938 AREGP15514 252 aa14.59□□□□□ -0.07
VIM-206ENST00000487938 DIAPH2-AS1Q14236 149 aa14.59□□□□□ -0.07
VIM-206ENST00000487938 CENPWQ5EE01 88 aa14.59□□□□□ -0.07
VIM-206ENST00000487938 TMEM167BQ9NRX6 74 aa14.59□□□□□ -0.07
VIM-206ENST00000487938 FKBP11Q9NYL4 201 aa14.59□□□□□ -0.07
VIM-206ENST00000487938 SPINK4O60575 86 aa14.59□□□□□ -0.07
VIM-206ENST00000487938 GNG4P50150 75 aa14.59□□□□□ -0.07
VIM-206ENST00000487938 SUMO1P63165 101 aaKnown RBP14.59□□□□□ -0.07
VIM-206ENST00000487938 KRTCAP3Q53RY4 240 aa14.59□□□□□ -0.07
VIM-206ENST00000487938 TMEM108Q6UXF1 575 aa14.59□□□□□ -0.07
VIM-206ENST00000487938 ZNF833PQ6ZTB9 187 aa14.59□□□□□ -0.07
VIM-206ENST00000487938 DOLPP1Q86YN1 238 aa14.59□□□□□ -0.07
VIM-206ENST00000487938 OR1L6Q8NGR2 347 aa14.59□□□□□ -0.07
VIM-206ENST00000487938 MRPL18Q9H0U6 180 aaKnown RBP14.59□□□□□ -0.07
VIM-206ENST00000487938 SH3BGRL2Q9UJC5 107 aa14.59□□□□□ -0.07
VIM-206ENST00000487938 TRAV5A0A0B4J249 113 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 DPRXA6NFQ7 191 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 NKX6-3A6NJ46 265 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 KLK10O43240 276 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 SNRPCP09234 159 aaKnown RBP14.58□□□□□ -0.08
VIM-206ENST00000487938 CD33P20138 364 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 IER3P46695 156 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 ADIPOQQ15848 244 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 TMEM200BQ69YZ2 307 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 MMD2Q8IY49 270 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 NUP37Q8NFH4 326 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 H1FXQ92522 213 aaKnown RBP14.58□□□□□ -0.08
VIM-206ENST00000487938 COMMD5Q9GZQ3 224 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 RNASE7Q9H1E1 156 aaKnown RBP14.58□□□□□ -0.08
VIM-206ENST00000487938 CHODLQ9H9P2 273 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 V9GYV3 84 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 BSNQ9UPA5 3926 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 A0A0G2JNJ9 132 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 C17orf100A8MU93 164 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 IGHV3-48P01763 117 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 TNFRSF1AP19438 455 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 LGALS4P56470 323 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 CD69Q07108 199 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 RPEL1Q2QD12 228 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 ZNF600Q6ZNG1 722 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 OR8I2Q8N0Y5 310 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 OR5B3Q8NH48 314 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 GAL3ST2Q9H3Q3 398 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 Q9UFV3 132 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 TP53TG3Q9ULZ0 132 aa14.58□□□□□ -0.08
VIM-206ENST00000487938 ATMQ13315 3056 aa14.57□□□□□ -0.08
VIM-206ENST00000487938 H0YJW9 148 aa14.57□□□□□ -0.08
VIM-206ENST00000487938 SSBP2P81877 361 aaPredicted RBP14.57□□□□□ -0.08
VIM-206ENST00000487938 IQCJQ1A5X6 159 aa14.57□□□□□ -0.08
VIM-206ENST00000487938 MORN5Q5VZ52 161 aa14.57□□□□□ -0.08
VIM-206ENST00000487938 OR1L8Q8NGR8 309 aa14.57□□□□□ -0.08
VIM-206ENST00000487938 CCL17Q92583 94 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms