RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 SLURP1P55000 103 aa9.41□□□□□ -0.9
SFXN3-206ENST00000487721 EGFEM1PQ0D2K5 195 aa9.41□□□□□ -0.9
SFXN3-206ENST00000487721 PPP1R1AQ13522 171 aa9.41□□□□□ -0.9
SFXN3-206ENST00000487721 DCTN2Q13561 401 aaKnown RBP9.41□□□□□ -0.9
SFXN3-206ENST00000487721 EXOSC2Q13868 293 aaKnown RBP9.41□□□□□ -0.9
SFXN3-206ENST00000487721 TMEM187Q14656 261 aa9.41□□□□□ -0.9
SFXN3-206ENST00000487721 RPEL1Q2QD12 228 aa9.41□□□□□ -0.9
SFXN3-206ENST00000487721 C15orf32Q32M92 178 aa9.41□□□□□ -0.9
SFXN3-206ENST00000487721 CTRB2Q6GPI1 263 aa9.41□□□□□ -0.9
SFXN3-206ENST00000487721 NRARPQ7Z6K4 114 aa9.41□□□□□ -0.9
SFXN3-206ENST00000487721 OR1L6Q8NGR2 347 aa9.41□□□□□ -0.9
SFXN3-206ENST00000487721 LHFPL5Q8TAF8 219 aa9.41□□□□□ -0.9
SFXN3-206ENST00000487721 GLYATL2Q8WU03 294 aa9.41□□□□□ -0.9
SFXN3-206ENST00000487721 DLX4Q92988 240 aaPredicted RBP9.41□□□□□ -0.9
SFXN3-206ENST00000487721 LSM10Q969L4 123 aaKnown RBP9.41□□□□□ -0.9
SFXN3-206ENST00000487721 SEC22AQ96IW7 307 aa9.41□□□□□ -0.9
SFXN3-206ENST00000487721 OR4C12Q96R67 309 aa9.41□□□□□ -0.9
SFXN3-206ENST00000487721 AURKAIP1Q9NWT8 199 aaPredicted RBP9.41□□□□□ -0.9
SFXN3-206ENST00000487721 PRR13Q9NZ81 148 aa9.41□□□□□ -0.9
SFXN3-206ENST00000487721 FBXL7Q9UJT9 491 aa9.41□□□□□ -0.9
SFXN3-206ENST00000487721 NSG2Q9Y328 171 aa9.41□□□□□ -0.9
SFXN3-206ENST00000487721 PIGBOS1A0A0B4J2F0 54 aa9.4□□□□□ -0.9
SFXN3-206ENST00000487721 C15orf61A6NNL5 157 aa9.4□□□□□ -0.9
SFXN3-206ENST00000487721 SAP30O75446 220 aa9.4□□□□□ -0.9
SFXN3-206ENST00000487721 SFT2D2O95562 160 aa9.4□□□□□ -0.9
SFXN3-206ENST00000487721 CDS2O95674 445 aa9.4□□□□□ -0.9
SFXN3-206ENST00000487721 HLA-AP01891 365 aaKnown RBP9.4□□□□□ -0.9
SFXN3-206ENST00000487721 REG1AP05451 166 aa9.4□□□□□ -0.9
SFXN3-206ENST00000487721 H2AFB2P0C5Z0 115 aa9.4□□□□□ -0.9
SFXN3-206ENST00000487721 OR13C7P0DN81 318 aa9.4□□□□□ -0.9
SFXN3-206ENST00000487721 MYOD1P15172 320 aa9.4□□□□□ -0.9
SFXN3-206ENST00000487721 TMEM268Q5VZI3 342 aa9.4□□□□□ -0.9
SFXN3-206ENST00000487721 DUSP18Q8NEJ0 188 aa9.4□□□□□ -0.9
SFXN3-206ENST00000487721 EEF1AKMT3Q96AZ1 226 aa9.4□□□□□ -0.9
SFXN3-206ENST00000487721 CXorf58Q96LI9 332 aa9.4□□□□□ -0.9
SFXN3-206ENST00000487721 PDCD10Q9BUL8 212 aa9.4□□□□□ -0.9
SFXN3-206ENST00000487721 NDUFA4L2Q9NRX3 87 aa9.4□□□□□ -0.9
SFXN3-206ENST00000487721 TMEM14BQ9NUH8 114 aa9.4□□□□□ -0.9
SFXN3-206ENST00000487721 A0A1B0GW64 132 aa9.39□□□□□ -0.91
SFXN3-206ENST00000487721 IGLC7A0M8Q6 106 aa9.39□□□□□ -0.91
SFXN3-206ENST00000487721 IGKV1-5P01602 117 aa9.39□□□□□ -0.91
SFXN3-206ENST00000487721 HSPE1P61604 102 aaKnown RBP9.39□□□□□ -0.91
SFXN3-206ENST00000487721 DEFA5Q01523 94 aa9.39□□□□□ -0.91
SFXN3-206ENST00000487721 DHRS2Q13268 280 aa9.39□□□□□ -0.91
SFXN3-206ENST00000487721 C4orf46Q504U0 113 aa9.39□□□□□ -0.91
SFXN3-206ENST00000487721 SLC25A24Q6NUK1 477 aa9.39□□□□□ -0.91
SFXN3-206ENST00000487721 PLET1Q6UQ28 207 aa9.39□□□□□ -0.91
SFXN3-206ENST00000487721 LYG2Q86SG7 212 aa9.39□□□□□ -0.91
SFXN3-206ENST00000487721 SELENOHQ8IZQ5 122 aaKnown RBP9.39□□□□□ -0.91
SFXN3-206ENST00000487721 RBPMSQ93062 196 aaKnown RBP9.39□□□□□ -0.91
SFXN3-206ENST00000487721 TMEM56-RWDD3S4R434 201 aa9.39□□□□□ -0.91
SFXN3-206ENST00000487721 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.38□□□□□ -0.91
SFXN3-206ENST00000487721 TRBV7-1A0A0A6YYK4 115 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 C9orf170A2RU37 121 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 CGB1A6NKQ9 187 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 PTTG1O95997 202 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 KRTAP10-11P60412 298 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 SRPXP78539 464 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 ERHP84090 104 aaKnown RBP9.38□□□□□ -0.91
SFXN3-206ENST00000487721 KLF5Q13887 457 aaPredicted RBP9.38□□□□□ -0.91
SFXN3-206ENST00000487721 KLK9Q2XQG4 91 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 ANKRD55Q3KP44 614 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 ACSM6Q6P461 480 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 FAM219AQ8IW50 185 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 LGI3Q8N145 548 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 SLC35G3Q8N808 338 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 OR10W1Q8NGF6 305 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 OR52B4Q8NGK2 314 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 IL22RA2Q969J5 263 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 FANCD2OSQ96PS1 177 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 PLEKHA3Q9HB20 300 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 ENY2Q9NPA8 101 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 PEMTQ9UBM1 199 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 KLK9Q9UKQ9 250 aa9.38□□□□□ -0.91
SFXN3-206ENST00000487721 IGLV11-55A0A075B6I3 123 aa9.37□□□□□ -0.91
SFXN3-206ENST00000487721 GGCTO75223 188 aaKnown RBP9.37□□□□□ -0.91
SFXN3-206ENST00000487721 NDUFB8O95169 186 aa9.37□□□□□ -0.91
SFXN3-206ENST00000487721 IFNA17P01571 189 aa9.37□□□□□ -0.91
SFXN3-206ENST00000487721 SPNP16150 400 aa9.37□□□□□ -0.91
SFXN3-206ENST00000487721 SYNJ2BPP57105 145 aa9.37□□□□□ -0.91
SFXN3-206ENST00000487721 WT1-ASQ06250 92 aa9.37□□□□□ -0.91
SFXN3-206ENST00000487721 IZUMO4Q1ZYL8 232 aa9.37□□□□□ -0.91
SFXN3-206ENST00000487721 DEFB121Q5J5C9 76 aa9.37□□□□□ -0.91
SFXN3-206ENST00000487721 C19orf35Q6ZS72 473 aa9.37□□□□□ -0.91
SFXN3-206ENST00000487721 SEC22CQ9BRL7 303 aa9.37□□□□□ -0.91
SFXN3-206ENST00000487721 CACFD1Q9UGQ2 172 aa9.37□□□□□ -0.91
SFXN3-206ENST00000487721 F11RQ9Y624 299 aaKnown RBP9.37□□□□□ -0.91
SFXN3-206ENST00000487721 NOTCH3Q9UM47 2321 aa9.36□□□□□ -0.91
SFXN3-206ENST00000487721 A0A0B4J2A0 478 aa9.36□□□□□ -0.91
SFXN3-206ENST00000487721 A0A0G2JRQ6 117 aa9.36□□□□□ -0.91
SFXN3-206ENST00000487721 DUXBA0A1W2PPF3 345 aa9.36□□□□□ -0.91
SFXN3-206ENST00000487721 INMT-MINDY4F8WBC2 141 aa9.36□□□□□ -0.91
SFXN3-206ENST00000487721 LY86O95711 162 aa9.36□□□□□ -0.91
SFXN3-206ENST00000487721 P0C879 139 aa9.36□□□□□ -0.91
SFXN3-206ENST00000487721 ARL3P36405 182 aa9.36□□□□□ -0.91
SFXN3-206ENST00000487721 SNCAP37840 140 aa9.36□□□□□ -0.91
SFXN3-206ENST00000487721 SUB1P53999 127 aaKnown RBP eCLIP9.36□□□□□ -0.91
SFXN3-206ENST00000487721 PRCDQ00LT1 54 aa9.36□□□□□ -0.91
SFXN3-206ENST00000487721 FAM106AQ4KMX7 169 aa9.36□□□□□ -0.91
SFXN3-206ENST00000487721 CLEC19AQ6UXS0 136 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms