RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 SLC16A13Q7RTY0 426 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 CEACAM19Q7Z692 300 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 SLC25A42Q86VD7 318 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 GPHB5Q86YW7 130 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 DHRSXQ8N5I4 330 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 TTC9CQ8N5M4 171 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 PACRGLQ8N7B6 248 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 OR56B1Q8NGI3 324 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 OR6M1Q8NGM8 313 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 OR10J5Q8NHC4 309 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 DYNLRB2Q8TF09 96 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 CYGBQ8WWM9 190 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 SRSF12Q8WXF0 261 aaKnown RBP2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 ARHGAP5-AS1Q96IT6 56 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 ADTRPQ96IZ2 230 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 HARBI1Q96MB7 349 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 SPIN2AQ99865 258 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 SPIN2BQ9BPZ2 258 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 CMSS1Q9BQ75 279 aaKnown RBP2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 OVOL2Q9BRP0 275 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 HDHD3Q9BSH5 251 aaPredicted RBP2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 CENPOQ9BU64 300 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 ST6GALNAC5Q9BVH7 336 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 PECRQ9BY49 303 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 KCNK15Q9H427 330 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 C8orf4Q9NR00 106 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 FKBP14Q9NWM8 211 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 ZNF230Q9UIE0 474 aaPredicted RBP2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 ALMS1Q8TCU4 4167 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 MUC4Q99102 2169 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 LOC102724200A0A096LPH7 203 aaPredicted RBP2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 TRAV25A0A0B4J276 109 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 NUPR2A6NF83 97 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 PPP5D1E7EU14 171 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 FABP7O15540 132 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 DENRO43583 198 aaKnown RBP2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 OR2C1O95371 312 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 CRYZL1O95825 349 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 PRH1P02810 166 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 CD3GP09693 182 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 KRTAP1-4P0C5Y4 121 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 GSTT2P0CG29 244 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 GSTT2BP0CG30 244 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 APELAP0DMC3 54 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 CBLN1P23435 193 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 DUTP33316 252 aaKnown RBP2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 PSMD7P51665 324 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 MRPS15P82914 257 aaKnown RBP2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 TNFRSF9Q07011 255 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 CDK10Q15131 360 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 P2RY14Q15391 338 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 SPHARQ15513 63 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 SSX1Q16384 188 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 TNXAQ16473 311 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 KLK9Q2XQG4 91 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 C15orf32Q32M92 178 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 C2orf76Q3KRA6 126 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 FAM106AQ4KMX7 169 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 IGSF11Q5DX21 431 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 ZNF57Q68EA5 555 aaPredicted RBP2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 OR4A47Q6IF82 309 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 CEMP1Q6PRD7 247 aaPredicted RBP2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 Q6ZS49 121 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 AHSA2Q719I0 299 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 MMD2Q8IY49 270 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 C8orf59Q8N0T1 100 aaPredicted RBP2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 TMEM61Q8N0U2 210 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 BPIFB6Q8NFQ5 453 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 OR52B4Q8NGK2 314 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 ACOT12Q8WYK0 555 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 FAM3DQ96BQ1 224 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 C5orf30Q96GV9 206 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 FAM210AQ96ND0 272 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 GFI1Q99684 422 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 MND1Q9BWT6 205 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 GGTLC1Q9BX51 225 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 WFDC10AQ9H1F0 79 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 OR2D2Q9H210 308 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 ZNF430Q9H8G1 570 aaPredicted RBP2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 PLGRKTQ9HBL7 147 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 PPP1R14DQ9NXH3 145 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 KLK9Q9UKQ9 250 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 RAB22AQ9UL26 194 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 TP53TG1Q9Y2A0 90 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 ZNF257Q9Y2Q1 563 aa2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 RBM7Q9Y580 266 aaKnown RBP2.91□□□□□ -1.94
SNRNP40-205ENST00000486941 KIR2DL5BA0A0G2JN68 375 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 KIR2DL5BA0A0G2JPC4 375 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 ZNF320A2RRD8 509 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 TMEM213A2RRL7 107 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 A8MWP6 167 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 UBE2CO00762 179 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 BET1O15155 118 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 ARL6IP5O75915 188 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 OR2J3O76001 311 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 SLC22A5O76082 557 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 DHFRP00374 187 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 HLA-AP01891 365 aaKnown RBP2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 CRYGCP07315 174 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 FCGR3AP08637 254 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms