RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 OR2B11Q5JQS5 317 aa7.39□□□□□ -1.23
COL12A1-208ENST00000486533 FAM209BQ5JX69 171 aa7.39□□□□□ -1.23
COL12A1-208ENST00000486533 C16orf82Q7Z2V1 217 aa7.39□□□□□ -1.23
COL12A1-208ENST00000486533 WDR86Q86TI4 376 aa7.39□□□□□ -1.23
COL12A1-208ENST00000486533 OR10D4PQ8NGN7 298 aa7.39□□□□□ -1.23
COL12A1-208ENST00000486533 OR4F5Q8NH21 305 aa7.39□□□□□ -1.23
COL12A1-208ENST00000486533 OR4A16Q8NH70 328 aa7.39□□□□□ -1.23
COL12A1-208ENST00000486533 OR1L1Q8NH94 360 aa7.39□□□□□ -1.23
COL12A1-208ENST00000486533 KLF14Q8TD94 323 aaPredicted RBP7.39□□□□□ -1.23
COL12A1-208ENST00000486533 ADTRPQ96IZ2 230 aa7.39□□□□□ -1.23
COL12A1-208ENST00000486533 OR4F4Q96R69 305 aa7.39□□□□□ -1.23
COL12A1-208ENST00000486533 NPCDR1Q9BY65 106 aa7.39□□□□□ -1.23
COL12A1-208ENST00000486533 RFNGQ9Y644 331 aa7.39□□□□□ -1.23
COL12A1-208ENST00000486533 TRAV9-1A0A075B6T8 112 aa7.38□□□□□ -1.23
COL12A1-208ENST00000486533 IGHV1-69-2A0A0G2JMI3 117 aa7.38□□□□□ -1.23
COL12A1-208ENST00000486533 WNT9BO14905 357 aa7.38□□□□□ -1.23
COL12A1-208ENST00000486533 S1PR2O95136 353 aa7.38□□□□□ -1.23
COL12A1-208ENST00000486533 IGHV3-13P01766 116 aa7.38□□□□□ -1.23
COL12A1-208ENST00000486533 TYMSP04818 313 aa7.38□□□□□ -1.23
COL12A1-208ENST00000486533 G6PCP35575 357 aa7.38□□□□□ -1.23
COL12A1-208ENST00000486533 OPRK1P41145 380 aa7.38□□□□□ -1.23
COL12A1-208ENST00000486533 ATP5IP56385 69 aaPredicted RBP7.38□□□□□ -1.23
COL12A1-208ENST00000486533 KRTAP24-1Q3LI83 254 aa7.38□□□□□ -1.23
COL12A1-208ENST00000486533 AARDQ4LEZ3 155 aa7.38□□□□□ -1.23
COL12A1-208ENST00000486533 COA6Q5JTJ3 125 aaKnown RBP7.38□□□□□ -1.23
COL12A1-208ENST00000486533 MBNL2Q5VZF2 373 aaKnown RBP7.38□□□□□ -1.23
COL12A1-208ENST00000486533 RPP25LQ8N5L8 163 aaKnown RBP7.38□□□□□ -1.23
COL12A1-208ENST00000486533 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.38□□□□□ -1.23
COL12A1-208ENST00000486533 OR2T10Q8NGZ9 312 aa7.38□□□□□ -1.23
COL12A1-208ENST00000486533 RNASEH2CQ8TDP1 164 aaKnown RBP7.38□□□□□ -1.23
COL12A1-208ENST00000486533 R3HDM4Q96D70 268 aa7.38□□□□□ -1.23
COL12A1-208ENST00000486533 PACRGQ96M98 296 aaPredicted RBP7.38□□□□□ -1.23
COL12A1-208ENST00000486533 PARLQ9H300 379 aa7.38□□□□□ -1.23
COL12A1-208ENST00000486533 SLC25A22Q9H936 323 aa7.38□□□□□ -1.23
COL12A1-208ENST00000486533 SAP30LQ9HAJ7 183 aa7.38□□□□□ -1.23
COL12A1-208ENST00000486533 GAB2Q9UQC2 676 aa7.38□□□□□ -1.23
COL12A1-208ENST00000486533 MDFIC2A0A1B0GVS7 189 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 MARCH11A6NNE9 402 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 MGST3O14880 152 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 SPRY3O43610 288 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 YPEL1O60688 119 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 GCGP01275 180 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 GYPAP02724 150 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 MSMBP08118 114 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 MPV17P39210 176 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 RPL23P62829 140 aaKnown RBP7.37□□□□□ -1.23
COL12A1-208ENST00000486533 HNF4GQ14541 408 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 IZUMO4Q1ZYL8 232 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 Q3ZCU0 254 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 PDLIM3Q53GG5 364 aaPredicted RBP7.37□□□□□ -1.23
COL12A1-208ENST00000486533 PRAMEF5Q5TYX0 476 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 PRAMEF6Q5VXH4 476 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 GCSAMQ8N6F7 178 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 ZNF383Q8NA42 475 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 OR1P1Q8NH06 330 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 TMEM170AQ8WVE7 144 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 FRZBQ92765 325 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 TMEM18Q96B42 140 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 RPUSD4Q96CM3 377 aaKnown RBP7.37□□□□□ -1.23
COL12A1-208ENST00000486533 YPEL2Q96QA6 119 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 VSIRQ9H7M9 311 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 ENY2Q9NPA8 101 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 HIF1ANQ9NWT6 349 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 OR6C3Q9NZP0 311 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 CLN8Q9UBY8 286 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 WDR83OSQ9Y284 106 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 ARL2-SNX15V9GYD0 113 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 WNK2Q9Y3S1 2297 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 C11orf94C9JXX5 98 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 FNDC10F2Z333 226 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 TMPRSS2O15393 492 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 GGCTO75223 188 aaKnown RBP7.37□□□□□ -1.23
COL12A1-208ENST00000486533 CXorf1O96002 111 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 PFN1P07737 140 aaKnown RBP7.37□□□□□ -1.23
COL12A1-208ENST00000486533 FABP4P15090 132 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 CD1BP29016 333 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 COL10A1Q03692 680 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 PYY3Q5JQD4 70 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 ACSM6Q6P461 480 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 WDR82Q6UXN9 313 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 C5orf24Q7Z6I8 188 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 OR52L2PQ8NGH6 319 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 OR4S2Q8NH73 311 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 MRGPRDQ8TDS7 321 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 CCL17Q92583 94 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 RAB24Q969Q5 203 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 TMEM186Q96B77 213 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 TIMD4Q96H15 378 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 C1orf159Q96HA4 380 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 SNX22Q96L94 193 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 NOL4LQ96MY1 436 aaPredicted RBP7.37□□□□□ -1.23
COL12A1-208ENST00000486533 UHRF2Q96PU4 802 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 C19orf24Q9BVV8 132 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 GNG12Q9UBI6 72 aa7.37□□□□□ -1.23
COL12A1-208ENST00000486533 TRAV39A0A0B4J263 110 aa7.36□□□□□ -1.23
COL12A1-208ENST00000486533 A0A1B0GWJ7 208 aa7.36□□□□□ -1.23
COL12A1-208ENST00000486533 PMS2P5A8MQ11 134 aa7.36□□□□□ -1.23
COL12A1-208ENST00000486533 C17orf98A8MV24 154 aa7.36□□□□□ -1.23
COL12A1-208ENST00000486533 TCF21O43680 179 aa7.36□□□□□ -1.23
COL12A1-208ENST00000486533 PSPNO60542 156 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms