RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 RAB3DO95716 219 aa13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 CD7P09564 240 aa13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 C8orf88P0DMB2 117 aa13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 TMBIM6P55061 237 aa13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 ELLP55199 621 aaPredicted RBP13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 HSPE1P61604 102 aaKnown RBP13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 MRPS10P82664 201 aaKnown RBP13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 SSBP1Q04837 148 aaKnown RBP13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 LINC00322Q6ZN03 302 aaPredicted RBP13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 OR4D10Q8NGI6 311 aa13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 OR1P1Q8NH06 330 aa13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 ZFAND1Q8TCF1 268 aa13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 WDR89Q96FK6 387 aaPredicted RBP13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 BSCL2Q96G97 398 aaPredicted RBP13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 BCL7BQ9BQE9 202 aa13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 C21orf62Q9NYP8 219 aa13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 MRPL27Q9P0M9 148 aaKnown RBP13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 MLXQ9UH92 298 aa13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 UFC1Q9Y3C8 167 aa13.86□□□□□ -0.19
PRPF40A-209ENST00000486100 IGHV3-21A0A0B4J1V1 117 aa13.85□□□□□ -0.19
PRPF40A-209ENST00000486100 OR2T8A6NH00 312 aa13.85□□□□□ -0.19
PRPF40A-209ENST00000486100 K7EIM0 57 aa13.85□□□□□ -0.19
PRPF40A-209ENST00000486100 STEAP1BQ6NZ63 245 aa13.85□□□□□ -0.19
PRPF40A-209ENST00000486100 SPSB3Q6PJ21 355 aa13.85□□□□□ -0.19
PRPF40A-209ENST00000486100 OR2C3Q8N628 320 aa13.85□□□□□ -0.19
PRPF40A-209ENST00000486100 MUC7Q8TAX7 377 aa13.85□□□□□ -0.19
PRPF40A-209ENST00000486100 CITED4Q96RK1 184 aa13.85□□□□□ -0.19
PRPF40A-209ENST00000486100 SPATA25Q9BR10 227 aa13.85□□□□□ -0.19
PRPF40A-209ENST00000486100 PLEKHA3Q9HB20 300 aa13.85□□□□□ -0.19
PRPF40A-209ENST00000486100 STAB2Q8WWQ8 2551 aa13.85□□□□□ -0.19
PRPF40A-209ENST00000486100 C3orf85A0A1B0GTC6 90 aa13.84□□□□□ -0.19
PRPF40A-209ENST00000486100 PRCDQ00LT1 54 aa13.84□□□□□ -0.19
PRPF40A-209ENST00000486100 SCGB2B2Q4G0G5 96 aa13.84□□□□□ -0.19
PRPF40A-209ENST00000486100 TMEM61Q8N0U2 210 aa13.84□□□□□ -0.19
PRPF40A-209ENST00000486100 DEFB125Q8N687 156 aa13.84□□□□□ -0.19
PRPF40A-209ENST00000486100 DYNC2LI1Q8TCX1 351 aa13.84□□□□□ -0.19
PRPF40A-209ENST00000486100 TP53RKQ96S44 253 aa13.84□□□□□ -0.19
PRPF40A-209ENST00000486100 COPZ2Q9P299 210 aa13.84□□□□□ -0.19
PRPF40A-209ENST00000486100 SELENOKQ9Y6D0 94 aa13.84□□□□□ -0.19
PRPF40A-209ENST00000486100 TRAV25A0A0B4J276 109 aa13.83□□□□□ -0.2
PRPF40A-209ENST00000486100 OR11H12B2RN74 326 aa13.83□□□□□ -0.2
PRPF40A-209ENST00000486100 F8W735 103 aaPredicted RBP13.83□□□□□ -0.2
PRPF40A-209ENST00000486100 ATG12O94817 140 aa13.83□□□□□ -0.2
PRPF40A-209ENST00000486100 PPP5CP53041 499 aa13.83□□□□□ -0.2
PRPF40A-209ENST00000486100 BTNL8Q6UX41 500 aa13.83□□□□□ -0.2
PRPF40A-209ENST00000486100 SLC16A13Q7RTY0 426 aa13.83□□□□□ -0.2
PRPF40A-209ENST00000486100 CCDC71LQ8N9Z2 235 aa13.83□□□□□ -0.2
PRPF40A-209ENST00000486100 TMEM190Q8WZ59 177 aa13.83□□□□□ -0.2
PRPF40A-209ENST00000486100 DIRAS2Q96HU8 199 aa13.83□□□□□ -0.2
PRPF40A-209ENST00000486100 CHRDL1Q9BU40 450 aa13.83□□□□□ -0.2
PRPF40A-209ENST00000486100 CCDC59Q9P031 241 aaKnown RBP13.83□□□□□ -0.2
PRPF40A-209ENST00000486100 NDUFA13Q9P0J0 144 aa13.83□□□□□ -0.2
PRPF40A-209ENST00000486100 RABL2AQ9UBK7 228 aaPredicted RBP13.83□□□□□ -0.2
PRPF40A-209ENST00000486100 RABL2BQ9UNT1 228 aa13.83□□□□□ -0.2
PRPF40A-209ENST00000486100 NDUFA4O00483 81 aa13.82□□□□□ -0.2
PRPF40A-209ENST00000486100 CTDSPLO15194 276 aa13.82□□□□□ -0.2
PRPF40A-209ENST00000486100 IGKV1-5P01602 117 aa13.82□□□□□ -0.2
PRPF40A-209ENST00000486100 CTSDP07339 412 aaPredicted RBP13.82□□□□□ -0.2
PRPF40A-209ENST00000486100 P0C879 139 aa13.82□□□□□ -0.2
PRPF40A-209ENST00000486100 ERHP84090 104 aaKnown RBP13.82□□□□□ -0.2
PRPF40A-209ENST00000486100 MEF2DQ14814 521 aa13.82□□□□□ -0.2
PRPF40A-209ENST00000486100 IZUMO4Q1ZYL8 232 aa13.82□□□□□ -0.2
PRPF40A-209ENST00000486100 Q56UQ5 140 aa13.82□□□□□ -0.2
PRPF40A-209ENST00000486100 UBAC2Q8NBM4 344 aa13.82□□□□□ -0.2
PRPF40A-209ENST00000486100 ZNF114Q8NC26 417 aa13.82□□□□□ -0.2
PRPF40A-209ENST00000486100 OR13C8Q8NGS7 320 aa13.82□□□□□ -0.2
PRPF40A-209ENST00000486100 MARCH1Q8TCQ1 289 aa13.82□□□□□ -0.2
PRPF40A-209ENST00000486100 SMIM4Q8WVI0 70 aa13.82□□□□□ -0.2
PRPF40A-209ENST00000486100 GAR1Q9NY12 217 aaKnown RBP13.82□□□□□ -0.2
PRPF40A-209ENST00000486100 CEPT1Q9Y6K0 416 aa13.82□□□□□ -0.2
PRPF40A-209ENST00000486100 A0A0B4J293 547 aa13.81□□□□□ -0.2
PRPF40A-209ENST00000486100 I3L2K1 104 aa13.81□□□□□ -0.2
PRPF40A-209ENST00000486100 B3GALNT1O75752 331 aa13.81□□□□□ -0.2
PRPF40A-209ENST00000486100 SCAF4O95104 1147 aaKnown RBP13.81□□□□□ -0.2
PRPF40A-209ENST00000486100 CTSGP08311 255 aa13.81□□□□□ -0.2
PRPF40A-209ENST00000486100 ADMP35318 185 aa13.81□□□□□ -0.2
PRPF40A-209ENST00000486100 IL18Q14116 193 aa13.81□□□□□ -0.2
PRPF40A-209ENST00000486100 ANKRD55Q3KP44 614 aa13.81□□□□□ -0.2
PRPF40A-209ENST00000486100 SP6Q3SY56 376 aa13.81□□□□□ -0.2
PRPF40A-209ENST00000486100 RBPMS2Q6ZRY4 209 aaKnown RBP13.81□□□□□ -0.2
PRPF40A-209ENST00000486100 OR52B4Q8NGK2 314 aa13.81□□□□□ -0.2
PRPF40A-209ENST00000486100 MISP3Q96FF7 219 aa13.81□□□□□ -0.2
PRPF40A-209ENST00000486100 SRD5A3Q9H8P0 318 aa13.81□□□□□ -0.2
PRPF40A-209ENST00000486100 DAZ1Q9NQZ3 744 aaKnown RBP13.81□□□□□ -0.2
PRPF40A-209ENST00000486100 BATF3Q9NR55 127 aa13.81□□□□□ -0.2
PRPF40A-209ENST00000486100 NBEAL2Q6ZNJ1 2754 aa13.81□□□□□ -0.2
PRPF40A-209ENST00000486100 RBMY1BA6NDE4 496 aaKnown RBP13.8□□□□□ -0.2
PRPF40A-209ENST00000486100 RBMY1EA6NEQ0 496 aaKnown RBP13.8□□□□□ -0.2
PRPF40A-209ENST00000486100 DISC1C4P0D8 188 aa13.8□□□□□ -0.2
PRPF40A-209ENST00000486100 K7EMT4 169 aa13.8□□□□□ -0.2
PRPF40A-209ENST00000486100 RBMY1DP0C7P1 496 aaKnown RBP13.8□□□□□ -0.2
PRPF40A-209ENST00000486100 UCP1P25874 307 aa13.8□□□□□ -0.2
PRPF40A-209ENST00000486100 FCGR2BP31994 310 aaPredicted RBP13.8□□□□□ -0.2
PRPF40A-209ENST00000486100 AKR1C2P52895 323 aa13.8□□□□□ -0.2
PRPF40A-209ENST00000486100 MFAP4P55083 255 aa13.8□□□□□ -0.2
PRPF40A-209ENST00000486100 TRIM16LQ309B1 348 aa13.8□□□□□ -0.2
PRPF40A-209ENST00000486100 CASC10Q5T4H9 136 aa13.8□□□□□ -0.2
PRPF40A-209ENST00000486100 FAAP20Q6NZ36 180 aa13.8□□□□□ -0.2
PRPF40A-209ENST00000486100 TXN2Q99757 166 aa13.8□□□□□ -0.2
PRPF40A-209ENST00000486100 WFDC10AQ9H1F0 79 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms